Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RNA5SP270-201ENST00000411361 118 ntBASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 AC073901.1-201ENST00000462471 408 ntBASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 AP001025.1-201ENST00000486139 332 ntBASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 TBCAP3-201ENST00000512475 312 ntBASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 RNU6-718P-201ENST00000516166 105 ntBASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 AC118273.2-201ENST00000532092 465 ntBASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 PSMA3P-201ENST00000555485 635 ntBASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 AL355297.2-201ENST00000604792 129 ntBASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 AC024614.3-201ENST00000637860 256 ntBASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.45□□□□□ -2.02
NUP54Q7Z3B4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 RNU6-1010P-201ENST00000362757 107 ntBASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 U3.12-201ENST00000364498 214 ntBASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 AL133475.1-201ENST00000404414 305 ntBASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 RNU6-373P-201ENST00000411247 98 ntBASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 IPO7P1-201ENST00000442031 636 ntBASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 AC013470.1-201ENST00000453438 462 ntBASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 RNU7-138P-201ENST00000459479 64 ntBASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 RPL23AP49-201ENST00000492925 468 ntBASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 RNU6-377P-201ENST00000515965 102 ntBASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 RNU6-1069P-201ENST00000516612 133 ntBASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 RPS3AP23-202ENST00000574601 686 ntBASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 RMST_3.1-201ENST00000611651 109 ntBASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 AC008121.3-201ENST00000618726 433 ntBASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 SCARNA15.3-201ENST00000626315 122 ntBASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 SCARNA4.1-201ENST00000628597 123 ntBASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NUP54Q7Z3B4 AC062016.1-201ENST00000355719 319 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 SNORD114-19-201ENST00000363072 75 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 Y_RNA.295-201ENST00000364918 102 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 EIF4E2P1-201ENST00000393781 255 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 SNORD23.1-201ENST00000408212 104 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 MIR1277-201ENST00000408536 78 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 RNU4-26P-201ENST00000410270 107 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 RNA5SP118-201ENST00000410385 109 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 ZNF885P-201ENST00000420174 1098 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 NUP35P1-201ENST00000422734 947 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 AL591043.1-201ENST00000432461 424 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 HMGN2P26-201ENST00000463169 339 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 AC112771.1-201ENST00000463581 102 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 SNORA19.2-201ENST00000516013 114 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 RNA5SP282-201ENST00000516355 108 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 AC087854.1-201ENST00000519706 414 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 CKS1BP7-201ENST00000522230 235 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 ELOCP31-201ENST00000540463 467 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 AC121758.2-201ENST00000553271 193 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 MIR4319-201ENST00000577285 85 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 AC090897.2-201ENST00000581715 130 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 MIR5092-201ENST00000583139 88 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 MIR4635-201ENST00000583759 79 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 RNU6-85P-201ENST00000605989 107 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 AC092794.1-201ENST00000612734 582 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 U6atac.1-201ENST00000616025 117 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 AC012640.5-201ENST00000623897 319 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 AC092608.2-201ENST00000624427 218 ntBASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.43□□□□□ -2.02
NUP54Q7Z3B4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 RNU6-527P-201ENST00000363425 104 ntBASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 RNU6-105P-201ENST00000363909 104 ntBASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 RNU1-91P-201ENST00000364746 163 ntBASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 MIR196B-201ENST00000384852 84 ntBASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 AL356057.3-201ENST00000402607 340 ntBASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 RNU2-52P-201ENST00000410680 190 ntBASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 AL117339.3-201ENST00000418733 162 ntBASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 AC009238.1-201ENST00000442165 424 ntBASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 MRPL50P4-201ENST00000446432 475 ntBASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 AC009237.6-201ENST00000446969 424 ntBASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 AP000705.1-201ENST00000454567 350 ntBASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 RPS3P1-201ENST00000456781 192 ntBASIC2.42□□□□□ -2.02
NUP54Q7Z3B4 AC092989.1-201ENST00000481235 277 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 421.7 ms