Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 Y_RNA.275-201ENST00000364726 110 ntBASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 RNU1-13P-201ENST00000384499 162 ntBASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 MIR329-1-201ENST00000385028 80 ntBASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 RPL21P65-201ENST00000406094 466 ntBASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 RNU2-61P-201ENST00000411069 191 ntBASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 RPL23AP3-201ENST00000453844 468 ntBASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 AC109925.1-201ENST00000478069 331 ntBASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 RPS29P20-201ENST00000489592 171 ntBASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 TOMM20P2-201ENST00000540082 421 ntBASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 AC008749.1-201ENST00000597650 306 ntBASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 AL356157.2-201ENST00000605122 111 ntBASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 MIR6867-201ENST00000610636 67 ntBASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 ZYXP1-201ENST00000617638 118 ntBASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
RNF111Q6ZNA4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 SPRR2C-201ENST00000290702 219 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 RNU6-50P-201ENST00000362356 103 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 RNU6-1175P-201ENST00000365200 107 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 RNU6-1280P-201ENST00000365211 107 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 Y_RNA.446-201ENST00000384178 104 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 Y_RNA.570-201ENST00000384750 101 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 MIR888-201ENST00000401186 77 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 MIR1251-201ENST00000408552 70 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 RNA5SP129-201ENST00000410276 118 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 RNU6-1140P-201ENST00000410517 106 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 RN7SKP51-201ENST00000410781 304 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 AL691449.1-201ENST00000426570 421 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 AC004975.1-201ENST00000428733 208 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 RPS29P31-201ENST00000446147 164 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 NDUFS5P3-201ENST00000450668 321 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 COX6CP14-201ENST00000469580 174 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 RN7SL271P-201ENST00000487601 295 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 AC091959.1-201ENST00000495857 238 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 RPS27AP10-201ENST00000496103 208 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 RNU6-581P-201ENST00000516214 105 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 RN7SKP289-201ENST00000517244 295 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 AC016256.1-201ENST00000547971 354 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 CR383656.8-201ENST00000549046 145 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 AL391261.3-201ENST00000557194 520 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 AC090877.1-201ENST00000561418 344 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 AC007224.1-201ENST00000564410 144 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 MIR5571-201ENST00000577998 113 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 AL451007.1-201ENST00000595491 289 ntBASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RNF111Q6ZNA4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 RNU6-1145P-201ENST00000384246 107 ntBASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 RNU6-628P-201ENST00000410675 107 ntBASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 SETP5-201ENST00000437270 562 ntBASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 MRPS10P1-201ENST00000448483 130 ntBASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 AP000873.1-201ENST00000463987 400 ntBASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 AP001025.1-201ENST00000486139 332 ntBASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 RPL7P47-201ENST00000497299 556 ntBASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 AC016632.1-201ENST00000503994 196 ntBASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 AC020593.1-201ENST00000507399 299 ntBASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 AC005921.1-201ENST00000510589 286 ntBASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 SNORA40.9-201ENST00000515895 93 ntBASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 RNU6-1278P-201ENST00000516130 107 ntBASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 SNORA31.23-201ENST00000517219 133 ntBASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 RPL21P9-201ENST00000556149 474 ntBASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 KLKP1-201ENST00000595979 403 ntBASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 AL138963.2-201ENST00000605137 226 ntBASIC3.75□□□□□ -1.81
RNF111Q6ZNA4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms