Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MIR3921-201ENST00000577308 85 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 AL158827.2-201ENST00000602494 330 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 AL355598.1-201ENST00000604169 202 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 MIR3976-201ENST00000606807 139 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 AL691447.3-201ENST00000635020 330 ntBASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
ZNF549Q6P9A3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
ZNF549Q6P9A3 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 MIR412-201ENST00000362142 91 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 RNU6-1222P-201ENST00000384615 107 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 Y_RNA.577-201ENST00000384794 101 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 MIR181B1-201ENST00000385240 110 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 MIR23A-201ENST00000385245 73 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 MIR1302-3-201ENST00000408128 138 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 RPL27AP8-201ENST00000424277 446 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 AL353997.1-201ENST00000432936 108 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 RPL23AP50-201ENST00000434149 455 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 AC092573.2-201ENST00000434546 243 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 RPL21P2-201ENST00000440049 481 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 AL031274.1-201ENST00000450334 232 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 HMGN2P13-201ENST00000476476 274 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 FO393415.2-201ENST00000480085 343 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 MRPS35P2-201ENST00000508242 191 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 RNU1-61P-201ENST00000516107 151 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 AP002404.1-201ENST00000532005 451 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 MIR5188-201ENST00000583467 113 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 AL021879.1-201ENST00000611756 288 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 MIR3651-201ENST00000630427 90 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 AC008669.1-201ENST00000565823 2178 ntBASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
ZNF549Q6P9A3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 AC002546.1-201ENST00000588041 2504 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNA5SP295-201ENST00000362655 121 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-37P-201ENST00000362692 107 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU1-35P-201ENST00000362782 153 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-11P-201ENST00000364234 107 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-1317P-201ENST00000364582 104 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU4-42P-201ENST00000364738 142 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-7-201ENST00000364784 107 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-8-201ENST00000365467 107 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-25P-201ENST00000383873 107 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-1-201ENST00000383898 107 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-48P-201ENST00000384161 107 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-36P-201ENST00000384172 107 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-4P-201ENST00000384205 107 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-5P-201ENST00000384238 107 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-3P-201ENST00000384314 107 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-16P-201ENST00000384385 107 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-15P-201ENST00000384534 107 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-2-201ENST00000384627 107 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-29P-201ENST00000384637 107 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-9-201ENST00000384776 107 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-33P-201ENST00000384793 107 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 MT-TR-201ENST00000387439 65 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-101P-201ENST00000410323 104 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU2-33P-201ENST00000410344 192 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-1156P-201ENST00000410365 100 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 AL117339.3-201ENST00000418733 162 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 NUP35P1-201ENST00000422734 947 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 AL160314.1-201ENST00000490836 438 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 AC139453.3-201ENST00000493276 369 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 SNORA31.8-201ENST00000516327 108 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-143P-201ENST00000516942 93 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RN7SKP272-201ENST00000516988 232 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 AC025755.1-201ENST00000521306 278 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 AC022616.4-201ENST00000522985 181 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 MYL12BP1-201ENST00000569826 507 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 MIR3668-201ENST00000582138 75 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 MIR4506-201ENST00000584693 77 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 AL355297.3-201ENST00000604082 446 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 AC124312.5-201ENST00000604451 268 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 RNU6-6P-201ENST00000606623 107 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.89□□□□□ -1.95
ZNF549Q6P9A3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.88□□□□□ -1.95
ZNF549Q6P9A3 Y_RNA.39-201ENST00000362620 98 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms