Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.89□□□□□ -2.11
NIPAL3Q6P499 AC092436.1-201ENST00000506450 503 ntBASIC1.89□□□□□ -2.11
NIPAL3Q6P499 AC079140.5-201ENST00000507882 310 ntBASIC1.89□□□□□ -2.11
NIPAL3Q6P499 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.89□□□□□ -2.11
NIPAL3Q6P499 AC109479.2-201ENST00000517842 174 ntBASIC1.89□□□□□ -2.11
NIPAL3Q6P499 AP000889.1-201ENST00000530968 660 ntBASIC1.89□□□□□ -2.11
NIPAL3Q6P499 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.89□□□□□ -2.11
NIPAL3Q6P499 OSBPL9P5-201ENST00000542581 171 ntBASIC1.89□□□□□ -2.11
NIPAL3Q6P499 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.89□□□□□ -2.11
NIPAL3Q6P499 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.89□□□□□ -2.11
NIPAL3Q6P499 MIR1273D-201ENST00000577266 86 ntBASIC1.89□□□□□ -2.11
NIPAL3Q6P499 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.89□□□□□ -2.11
NIPAL3Q6P499 AC002984.1-201ENST00000591692 448 ntBASIC1.89□□□□□ -2.11
NIPAL3Q6P499 AL158063.1-201ENST00000615349 536 ntBASIC1.89□□□□□ -2.11
NIPAL3Q6P499 AC063943.3-201ENST00000615562 356 ntBASIC1.89□□□□□ -2.11
NIPAL3Q6P499 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.89□□□□□ -2.11
NIPAL3Q6P499 AC008555.8-201ENST00000623602 2168 ntBASIC1.89□□□□□ -2.11
NIPAL3Q6P499 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.89□□□□□ -2.11
NIPAL3Q6P499 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.88□□□□□ -2.11
NIPAL3Q6P499 RNU4-52P-201ENST00000384209 138 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 MIR29C-201ENST00000385231 88 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 SNORA46.1-201ENST00000391069 153 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 RN7SKP32-201ENST00000410167 303 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 Y_RNA.597-201ENST00000410463 100 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 RN7SKP223-201ENST00000410582 62 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.88□□□□□ -2.11
NIPAL3Q6P499 DPH3P2-201ENST00000422618 250 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 SRIP2-201ENST00000428470 166 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 MTCO2P11-201ENST00000431069 680 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.88□□□□□ -2.11
NIPAL3Q6P499 AL139415.2-201ENST00000431968 163 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 MTND4P32-201ENST00000437189 1237 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 AL031667.1-201ENST00000440222 725 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 PRELID3BP1-201ENST00000457142 540 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.88□□□□□ -2.11
NIPAL3Q6P499 SCARNA18-201ENST00000459004 134 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 RNA5SP233-201ENST00000459153 113 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 TRBV12-1-201ENST00000479785 344 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 AC079382.1-201ENST00000493346 557 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 RNU2-69P-201ENST00000516061 100 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 MTCO2P4-201ENST00000517968 247 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 AC018630.3-201ENST00000542637 96 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 AC091544.4-201ENST00000555268 342 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 MTND3P12-201ENST00000559068 328 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 AC091805.2-201ENST00000603848 235 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 AC025449.1-201ENST00000603896 529 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 AC091834.1-201ENST00000614543 472 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 AL132822.1-201ENST00000617063 513 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 AC008147.4-201ENST00000617570 1204 ntBASIC1.88□□□□□ -2.11
NIPAL3Q6P499 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NIPAL3Q6P499 AP000568.1-201ENST00000282964 442 ntBASIC1.87□□□□□ -2.11
NIPAL3Q6P499 RNU6-743P-201ENST00000364151 106 ntBASIC1.87□□□□□ -2.11
NIPAL3Q6P499 RNU6-1127P-201ENST00000384580 107 ntBASIC1.87□□□□□ -2.11
NIPAL3Q6P499 BTF3L4P2-201ENST00000392798 346 ntBASIC1.87□□□□□ -2.11
NIPAL3Q6P499 RNU2-29P-201ENST00000410423 189 ntBASIC1.87□□□□□ -2.11
NIPAL3Q6P499 SNORD56-201ENST00000413522 71 ntBASIC1.87□□□□□ -2.11
NIPAL3Q6P499 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.87□□□□□ -2.11
NIPAL3Q6P499 MTATP6P18-201ENST00000417994 673 ntBASIC1.87□□□□□ -2.11
NIPAL3Q6P499 RPL32P28-201ENST00000443577 397 ntBASIC1.87□□□□□ -2.11
NIPAL3Q6P499 AC096638.1-201ENST00000444678 216 ntBASIC1.87□□□□□ -2.11
NIPAL3Q6P499 USP9YP29-201ENST00000445112 563 ntBASIC1.87□□□□□ -2.11
NIPAL3Q6P499 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.87□□□□□ -2.11
NIPAL3Q6P499 FDX1P2-201ENST00000450769 375 ntBASIC1.87□□□□□ -2.11
NIPAL3Q6P499 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.87□□□□□ -2.11
NIPAL3Q6P499 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.87□□□□□ -2.11
NIPAL3Q6P499 RPL9P6-201ENST00000492764 598 ntBASIC1.87□□□□□ -2.11
NIPAL3Q6P499 ARL2BPP4-201ENST00000506854 471 ntBASIC1.87□□□□□ -2.11
NIPAL3Q6P499 AC105417.1-201ENST00000514691 285 ntBASIC1.87□□□□□ -2.11
NIPAL3Q6P499 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.87□□□□□ -2.11
NIPAL3Q6P499 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.87□□□□□ -2.11
NIPAL3Q6P499 RSL24D1P11-201ENST00000591045 491 ntBASIC1.87□□□□□ -2.11
NIPAL3Q6P499 Z99497.2-201ENST00000603634 310 ntBASIC1.87□□□□□ -2.11
NIPAL3Q6P499 AC087752.4-201ENST00000605911 462 ntBASIC1.87□□□□□ -2.11
NIPAL3Q6P499 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
NIPAL3Q6P499 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
NIPAL3Q6P499 ZNF680P1-201ENST00000436625 1469 ntBASIC1.87□□□□□ -2.11
NIPAL3Q6P499 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
NIPAL3Q6P499 MTND4P14-201ENST00000435799 1354 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
NIPAL3Q6P499 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
NIPAL3Q6P499 RNU6-1120P-201ENST00000362988 108 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 U8.2-201ENST00000363156 134 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 SNORD116-8-201ENST00000384365 95 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 SNORD14D-201ENST00000384390 87 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 SNORA64-201ENST00000384674 134 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
NIPAL3Q6P499 SNORA16.2-201ENST00000390991 127 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 RNU6-293P-201ENST00000411259 106 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.86□□□□□ -2.11
NIPAL3Q6P499 CBX3P6-201ENST00000430257 527 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 CETN4P-201ENST00000432407 469 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.86□□□□□ -2.11
NIPAL3Q6P499 AL353689.1-201ENST00000438895 199 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.86□□□□□ -2.11
NIPAL3Q6P499 SNRPFP3-201ENST00000457792 225 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 SNRPGP7-201ENST00000469016 106 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 PTP4A1P4-201ENST00000512479 322 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 AC010493.1-201ENST00000513479 292 ntBASIC1.86□□□□□ -2.11
NIPAL3Q6P499 RNU5F-2P-201ENST00000516066 82 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms