Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 MIR4513-201ENST00000581077 86 ntBASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 LINC02555-201ENST00000563933 1951 ntBASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 SNORD81.1-201ENST00000363064 77 ntBASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 Y_RNA.143-201ENST00000363520 106 ntBASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 Y_RNA.352-201ENST00000365439 102 ntBASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 RNU6-338P-201ENST00000383888 105 ntBASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 SNORD17-201ENST00000390930 237 ntBASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 AL358453.1-201ENST00000422522 250 ntBASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 GZMAP1-201ENST00000503054 631 ntBASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 RN7SKP83-201ENST00000516512 178 ntBASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 SNORA43.2-201ENST00000516652 128 ntBASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 RNU6-1183P-201ENST00000517054 60 ntBASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 RRN3P3-201ENST00000549207 578 ntBASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PRPF40BQ6NWY9 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 AC118273.1-201ENST00000525324 3006 ntBASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 U3.19-201ENST00000390893 196 ntBASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 SNORD115-46-201ENST00000390982 71 ntBASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 RNA5SP31-201ENST00000411144 127 ntBASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 HMGN2P30-201ENST00000423237 256 ntBASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 PIGPP3-201ENST00000425307 415 ntBASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 Z82188.1-201ENST00000436709 154 ntBASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 AC009296.1-201ENST00000443146 155 ntBASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 RPL37P4-201ENST00000448908 268 ntBASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 RPL21P104-201ENST00000464143 478 ntBASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 LINC00933-203ENST00000559812 219 ntBASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 AC010900.2-201ENST00000604508 210 ntBASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 AC241585.2-209ENST00000638217 143 ntBASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 HSPA8P1-201ENST00000425843 1833 ntBASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 MAPK10-373ENST00000641983 6772 ntBASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.44□□□□□ -1.7
PRPF40BQ6NWY9 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 AC073073.2-201ENST00000609827 2578 ntBASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 FTLP6-201ENST00000355274 422 ntBASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 snoU2_19.2-201ENST00000363024 80 ntBASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 RNU6-898P-201ENST00000365627 104 ntBASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 RNU6-1062P-201ENST00000383908 107 ntBASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 U3.26-201ENST00000391236 204 ntBASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 MRPL35P1-201ENST00000404272 572 ntBASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 RNA5SP129-201ENST00000410276 118 ntBASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 U8.22-201ENST00000459141 133 ntBASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 RPL30P5-201ENST00000494923 336 ntBASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 H3F3AP1-201ENST00000559984 334 ntBASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 CYCSP39-201ENST00000565821 309 ntBASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 AC136932.1-201ENST00000574771 208 ntBASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 AC024153.1-201ENST00000603103 365 ntBASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 AC009779.6-201ENST00000603972 165 ntBASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 SCARNA4-201ENST00000629045 128 ntBASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRPF40BQ6NWY9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 RNU6-222P-201ENST00000362438 107 ntBASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 Y_RNA.65-201ENST00000362846 100 ntBASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 Y_RNA.500-201ENST00000384466 111 ntBASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 UBA52P6-201ENST00000399822 382 ntBASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 AL603910.2-201ENST00000407268 136 ntBASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 Y_RNA.602-201ENST00000410535 92 ntBASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 EIF1AXP1-201ENST00000419267 435 ntBASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 AC092047.1-201ENST00000424997 240 ntBASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 PRELID3BP1-201ENST00000457142 540 ntBASIC4.42□□□□□ -1.7
PRPF40BQ6NWY9 AC093663.1-201ENST00000497190 394 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms