Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AL162395.1-201ENST00000457882 422 ntBASIC1.93□□□□□ -2.1
ATL3Q6DD88 RPL23AP42-201ENST00000471152 471 ntBASIC1.93□□□□□ -2.1
ATL3Q6DD88 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.93□□□□□ -2.1
ATL3Q6DD88 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.93□□□□□ -2.1
ATL3Q6DD88 MTCYBP40-201ENST00000509390 1135 ntBASIC1.93□□□□□ -2.1
ATL3Q6DD88 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.93□□□□□ -2.1
ATL3Q6DD88 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.93□□□□□ -2.1
ATL3Q6DD88 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.93□□□□□ -2.1
ATL3Q6DD88 BNIP3P30-201ENST00000601184 574 ntBASIC1.93□□□□□ -2.1
ATL3Q6DD88 AC073410.2-201ENST00000603240 332 ntBASIC1.93□□□□□ -2.1
ATL3Q6DD88 AC006566.1-201ENST00000608943 513 ntBASIC1.93□□□□□ -2.1
ATL3Q6DD88 AC008147.4-201ENST00000617570 1204 ntBASIC1.93□□□□□ -2.1
ATL3Q6DD88 AC136475.10-201ENST00000620253 385 ntBASIC1.93□□□□□ -2.1
ATL3Q6DD88 AC078883.4-201ENST00000623218 367 ntBASIC1.93□□□□□ -2.1
ATL3Q6DD88 SCARNA4-202ENST00000625402 129 ntBASIC1.93□□□□□ -2.1
ATL3Q6DD88 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.92□□□□□ -2.1
ATL3Q6DD88 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
ATL3Q6DD88 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
ATL3Q6DD88 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
ATL3Q6DD88 SNORA62.1-201ENST00000364287 154 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 RNU6-116P-201ENST00000384042 109 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 SNORA75-201ENST00000384158 137 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 MIR504-201ENST00000385065 83 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 RNA5SP390-201ENST00000410191 113 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 RN7SKP142-201ENST00000411236 328 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.92□□□□□ -2.1
ATL3Q6DD88 AC133104.1-201ENST00000429100 218 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.92□□□□□ -2.1
ATL3Q6DD88 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.92□□□□□ -2.1
ATL3Q6DD88 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 AL353689.1-201ENST00000438895 199 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 MTND1P18-201ENST00000448191 573 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 RNU7-182P-201ENST00000459009 62 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 AC018868.1-201ENST00000491307 315 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 ARL2BPP4-201ENST00000506854 471 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.92□□□□□ -2.1
ATL3Q6DD88 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.92□□□□□ -2.1
ATL3Q6DD88 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.92□□□□□ -2.1
ATL3Q6DD88 AP002453.2-201ENST00000533503 320 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 NDUFA5P6-201ENST00000542110 379 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 AC010928.2-201ENST00000588017 287 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 RPL30P11-203ENST00000598995 310 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 SNRPGP17-201ENST00000603780 214 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 AC073114.1-201ENST00000612027 490 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 MIR7843-201ENST00000622274 79 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 AC009161.2-201ENST00000624626 138 ntBASIC1.92□□□□□ -2.1
ATL3Q6DD88 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 RNU4-48P-201ENST00000365559 182 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 RNU6-45P-201ENST00000384471 107 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 SNORD116-20-201ENST00000384529 92 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 AL356432.1-201ENST00000405809 419 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 UBE2V1P10-201ENST00000414685 269 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 AC138623.1-201ENST00000418060 216 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ATL3Q6DD88 MTCO2P11-201ENST00000431069 680 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.91□□□□□ -2.1
ATL3Q6DD88 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.91□□□□□ -2.1
ATL3Q6DD88 AL596276.1-201ENST00000434465 418 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 DNAJC19P4-201ENST00000440115 345 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 KATNBL1P3-201ENST00000443475 909 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.91□□□□□ -2.1
ATL3Q6DD88 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.91□□□□□ -2.1
ATL3Q6DD88 RNU6-586P-201ENST00000517265 104 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 MTCO2P4-201ENST00000517968 247 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.91□□□□□ -2.1
ATL3Q6DD88 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.91□□□□□ -2.1
ATL3Q6DD88 IMMP1LP2-201ENST00000552954 492 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.91□□□□□ -2.1
ATL3Q6DD88 AC233702.2-202ENST00000562547 291 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.91□□□□□ -2.1
ATL3Q6DD88 AC090897.2-201ENST00000581715 130 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 AC040904.1-201ENST00000590850 223 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 AL031274.2-201ENST00000599419 203 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 Z84480.1-201ENST00000605131 311 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 AC093788.1-201ENST00000609356 927 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 AL158063.1-201ENST00000615349 536 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 uc_338.15-201ENST00000615470 191 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 SEPT14P19-203ENST00000633205 211 ntBASIC1.91□□□□□ -2.1
ATL3Q6DD88 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
ATL3Q6DD88 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
ATL3Q6DD88 OR4G2P-201ENST00000328113 903 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 Y_RNA.40-201ENST00000362645 93 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 Y_RNA.201-201ENST00000364052 96 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 RNU6-1029P-201ENST00000384109 107 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 MIR186-201ENST00000384988 86 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 AF228730.1-201ENST00000397972 663 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 RAP1BP3-201ENST00000407180 549 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.9□□□□□ -2.11
ATL3Q6DD88 CETN4P-201ENST00000432407 469 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.9□□□□□ -2.11
ATL3Q6DD88 AC098826.2-201ENST00000452011 651 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.9□□□□□ -2.11
ATL3Q6DD88 snoU13.14-201ENST00000459372 104 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 RPS29P21-201ENST00000496272 170 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 AC092436.1-201ENST00000506450 503 ntBASIC1.9□□□□□ -2.11
ATL3Q6DD88 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.9□□□□□ -2.11
ATL3Q6DD88 AC074344.1-201ENST00000512823 224 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms