Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 AC104465.1-201ENST00000611365 139 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 AC130454.1-201ENST00000622948 401 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 AC104820.1-201ENST00000624183 307 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 AC138627.2-201ENST00000624202 601 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
NUP188Q5SRE5 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.16□□□□□ -2.38
NUP188Q5SRE5 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
NUP188Q5SRE5 SNORA8.3-201ENST00000384679 139 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 AL451054.2-201ENST00000420896 202 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.16□□□□□ -2.38
NUP188Q5SRE5 RPL36AP53-201ENST00000432891 316 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 RPEP5-201ENST00000441137 268 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.16□□□□□ -2.38
NUP188Q5SRE5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.16□□□□□ -2.38
NUP188Q5SRE5 AC118282.2-201ENST00000508739 374 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 RNA5SP255-201ENST00000516370 107 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 IGLVI-20-201ENST00000519296 130 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 AL353997.4-201ENST00000586196 166 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 AC002545.1-201ENST00000592511 181 ntBASIC0.16□□□□□ -2.38
NUP188Q5SRE5 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.16□□□□□ -2.38
NUP188Q5SRE5 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
NUP188Q5SRE5 MTND4P14-201ENST00000435799 1354 ntBASIC0.15□□□□□ -2.39
NUP188Q5SRE5 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
NUP188Q5SRE5 Y_RNA.99-201ENST00000363138 105 ntBASIC0.15□□□□□ -2.39
NUP188Q5SRE5 RNU4-73P-201ENST00000363164 141 ntBASIC0.15□□□□□ -2.39
NUP188Q5SRE5 Y_RNA.142-201ENST00000363491 102 ntBASIC0.15□□□□□ -2.39
NUP188Q5SRE5 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.15□□□□□ -2.39
NUP188Q5SRE5 RPL21P111-201ENST00000418453 477 ntBASIC0.15□□□□□ -2.39
NUP188Q5SRE5 AC008267.5-201ENST00000424928 265 ntBASIC0.15□□□□□ -2.39
NUP188Q5SRE5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.15□□□□□ -2.39
NUP188Q5SRE5 RNU5A-4P-201ENST00000516588 111 ntBASIC0.15□□□□□ -2.39
NUP188Q5SRE5 AP000763.2-201ENST00000540641 163 ntBASIC0.15□□□□□ -2.39
NUP188Q5SRE5 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.15□□□□□ -2.39
NUP188Q5SRE5 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.15□□□□□ -2.39
NUP188Q5SRE5 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.15□□□□□ -2.39
NUP188Q5SRE5 MIR5094-201ENST00000578766 85 ntBASIC0.15□□□□□ -2.39
NUP188Q5SRE5 AC105129.3-201ENST00000605455 485 ntBASIC0.15□□□□□ -2.39
NUP188Q5SRE5 AL162730.1-201ENST00000605734 292 ntBASIC0.15□□□□□ -2.39
NUP188Q5SRE5 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
NUP188Q5SRE5 AC009509.4-201ENST00000619202 509 ntBASIC0.15□□□□□ -2.39
NUP188Q5SRE5 AC068205.3-201ENST00000636385 468 ntBASIC0.15□□□□□ -2.39
NUP188Q5SRE5 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
NUP188Q5SRE5 Y_RNA.571-201ENST00000384753 98 ntBASIC0.14□□□□□ -2.39
NUP188Q5SRE5 RNU6-910P-201ENST00000390844 107 ntBASIC0.14□□□□□ -2.39
NUP188Q5SRE5 AL121578.1-201ENST00000428051 892 ntBASIC0.14□□□□□ -2.39
NUP188Q5SRE5 CETN4P-201ENST00000432407 469 ntBASIC0.14□□□□□ -2.39
NUP188Q5SRE5 MTND2P5-201ENST00000432656 1006 ntBASIC0.14□□□□□ -2.39
NUP188Q5SRE5 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.14□□□□□ -2.39
NUP188Q5SRE5 MTCO3P18-201ENST00000440206 761 ntBASIC0.14□□□□□ -2.39
NUP188Q5SRE5 MTCO3P7-201ENST00000510008 774 ntBASIC0.14□□□□□ -2.39
NUP188Q5SRE5 RNU6-965P-201ENST00000516721 96 ntBASIC0.14□□□□□ -2.39
NUP188Q5SRE5 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.14□□□□□ -2.39
NUP188Q5SRE5 AL121579.1-201ENST00000555129 305 ntBASIC0.14□□□□□ -2.39
NUP188Q5SRE5 AC098614.4-201ENST00000607601 462 ntBASIC0.14□□□□□ -2.39
NUP188Q5SRE5 RNU5E-8P-201ENST00000363502 116 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 Y_RNA.185-201ENST00000363894 100 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 Y_RNA.324-201ENST00000365165 102 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.13□□□□□ -2.39
NUP188Q5SRE5 AL353621.1-201ENST00000418219 243 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 AC113410.1-201ENST00000505029 247 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 AC008628.1-201ENST00000508663 265 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.13□□□□□ -2.39
NUP188Q5SRE5 SNORA31.4-201ENST00000516049 129 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 RNA5SP503-201ENST00000517047 117 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 RN7SKP258-201ENST00000517151 304 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.13□□□□□ -2.39
NUP188Q5SRE5 AC090502.2-201ENST00000549267 280 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.13□□□□□ -2.39
NUP188Q5SRE5 MTRNR2L2-201ENST00000604882 87 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 AC242628.1-201ENST00000606810 391 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
NUP188Q5SRE5 AC240442.1-201ENST00000616055 283 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.13□□□□□ -2.39
NUP188Q5SRE5 AC090625.1-201ENST00000357130 210 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 RNU6-819P-201ENST00000364116 107 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 RNU6-923P-201ENST00000364753 107 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 RNU6-30P-201ENST00000384561 107 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 RNU6-878P-201ENST00000384578 110 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 NDUFA5P7-201ENST00000452914 242 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 CECR9-201ENST00000453421 199 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 AC010587.2-201ENST00000511727 448 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 RNU6-416P-201ENST00000516265 103 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.13□□□□□ -2.39
NUP188Q5SRE5 MTCO2P15-201ENST00000532655 656 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 ZNF849P-201ENST00000594711 1566 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 AC012065.4-201ENST00000602445 679 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 AC011451.2-201ENST00000604303 598 ntBASIC0.13□□□□□ -2.39
NUP188Q5SRE5 MIR411-201ENST00000362239 96 ntBASIC0.12□□□□□ -2.39
NUP188Q5SRE5 RNU6-1065P-201ENST00000384513 106 ntBASIC0.12□□□□□ -2.39
NUP188Q5SRE5 RNU6-658P-201ENST00000384606 106 ntBASIC0.12□□□□□ -2.39
NUP188Q5SRE5 RNU6-754P-201ENST00000391166 107 ntBASIC0.12□□□□□ -2.39
NUP188Q5SRE5 MIR942-201ENST00000401111 86 ntBASIC0.12□□□□□ -2.39
NUP188Q5SRE5 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.12□□□□□ -2.39
NUP188Q5SRE5 AC116655.1-201ENST00000508324 901 ntBASIC0.12□□□□□ -2.39
NUP188Q5SRE5 AC079140.3-201ENST00000511111 550 ntBASIC0.12□□□□□ -2.39
NUP188Q5SRE5 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.12□□□□□ -2.39
NUP188Q5SRE5 AL118556.2-201ENST00000614375 824 ntBASIC0.12□□□□□ -2.39
NUP188Q5SRE5 AC009269.6-201ENST00000621778 588 ntBASIC0.12□□□□□ -2.39
NUP188Q5SRE5 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms