Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AC068205.3-201ENST00000636385 468 ntBASIC0.17□□□□□ -2.38
SCN7AQ01118 RNU6-296P-201ENST00000384608 107 ntBASIC0.16□□□□□ -2.38
SCN7AQ01118 AL589872.1-201ENST00000426602 288 ntBASIC0.16□□□□□ -2.38
SCN7AQ01118 MTND1P28-201ENST00000435623 950 ntBASIC0.16□□□□□ -2.38
SCN7AQ01118 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.16□□□□□ -2.38
SCN7AQ01118 AC048346.1-201ENST00000510247 144 ntBASIC0.16□□□□□ -2.38
SCN7AQ01118 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.16□□□□□ -2.38
SCN7AQ01118 MIR6516-201ENST00000630554 81 ntBASIC0.16□□□□□ -2.38
SCN7AQ01118 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.38
SCN7AQ01118 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
SCN7AQ01118 SNORD114-15-201ENST00000364687 72 ntBASIC0.15□□□□□ -2.39
SCN7AQ01118 RNU6-700P-201ENST00000391043 107 ntBASIC0.15□□□□□ -2.39
SCN7AQ01118 MTND1P21-201ENST00000412991 285 ntBASIC0.15□□□□□ -2.39
SCN7AQ01118 AC099677.2-201ENST00000436385 175 ntBASIC0.15□□□□□ -2.39
SCN7AQ01118 AC098869.1-201ENST00000481627 292 ntBASIC0.15□□□□□ -2.39
SCN7AQ01118 AC074344.1-201ENST00000512823 224 ntBASIC0.15□□□□□ -2.39
SCN7AQ01118 RNA5SP168-201ENST00000516642 112 ntBASIC0.15□□□□□ -2.39
SCN7AQ01118 RNA5SP503-201ENST00000517047 117 ntBASIC0.15□□□□□ -2.39
SCN7AQ01118 MTCO2P15-201ENST00000532655 656 ntBASIC0.15□□□□□ -2.39
SCN7AQ01118 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.15□□□□□ -2.39
SCN7AQ01118 AL118556.2-201ENST00000614375 824 ntBASIC0.15□□□□□ -2.39
SCN7AQ01118 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
SCN7AQ01118 SGO1P1-201ENST00000603525 1447 ntBASIC0.15□□□□□ -2.39
SCN7AQ01118 RNU4-12P-201ENST00000365233 139 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.14□□□□□ -2.39
SCN7AQ01118 RSL24D1P8-201ENST00000434442 492 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.14□□□□□ -2.39
SCN7AQ01118 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.14□□□□□ -2.39
SCN7AQ01118 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.14□□□□□ -2.39
SCN7AQ01118 AC104692.1-201ENST00000472406 90 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.14□□□□□ -2.39
SCN7AQ01118 MTCYBP43-201ENST00000513621 740 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 RNU5A-4P-201ENST00000516588 111 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 ACA59.2-201ENST00000517061 156 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 RN7SKP258-201ENST00000517151 304 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 AL121579.1-201ENST00000555129 305 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 AC004853.1-201ENST00000604902 698 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 AC004908.3-201ENST00000610248 625 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 AL357075.2-201ENST00000614906 189 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 AC009509.4-201ENST00000619202 509 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
SCN7AQ01118 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.14□□□□□ -2.39
SCN7AQ01118 RNU6-223P-201ENST00000362830 107 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 RNU6-1078P-201ENST00000364522 103 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
SCN7AQ01118 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
SCN7AQ01118 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
SCN7AQ01118 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 RPL36AP53-201ENST00000432891 316 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 AL096829.2-201ENST00000446582 742 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 AC010587.2-201ENST00000511727 448 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 RN7SKP256-201ENST00000517201 314 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 AC018630.3-201ENST00000542637 96 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 AC093519.1-201ENST00000566109 298 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.14□□□□□ -2.39
SCN7AQ01118 AC012065.4-201ENST00000602445 679 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 AC107952.2-201ENST00000606048 486 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 AL603758.1-201ENST00000618654 241 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 U6.101-201ENST00000637707 76 ntBASIC0.14□□□□□ -2.39
SCN7AQ01118 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
SCN7AQ01118 SNORA4.3-201ENST00000365564 137 ntBASIC0.13□□□□□ -2.39
SCN7AQ01118 MIR520A-201ENST00000384862 85 ntBASIC0.13□□□□□ -2.39
SCN7AQ01118 RPL21P111-201ENST00000418453 477 ntBASIC0.13□□□□□ -2.39
SCN7AQ01118 AC092423.1-201ENST00000430165 186 ntBASIC0.13□□□□□ -2.39
SCN7AQ01118 AC092170.1-201ENST00000440211 356 ntBASIC0.13□□□□□ -2.39
SCN7AQ01118 AL050341.1-201ENST00000447743 313 ntBASIC0.13□□□□□ -2.39
SCN7AQ01118 CYCTP-201ENST00000504253 315 ntBASIC0.13□□□□□ -2.39
SCN7AQ01118 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.13□□□□□ -2.39
SCN7AQ01118 RNU2-53P-201ENST00000516257 147 ntBASIC0.13□□□□□ -2.39
SCN7AQ01118 RNU6-758P-201ENST00000516292 89 ntBASIC0.13□□□□□ -2.39
SCN7AQ01118 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.13□□□□□ -2.39
SCN7AQ01118 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.13□□□□□ -2.39
SCN7AQ01118 MIR5094-201ENST00000578766 85 ntBASIC0.13□□□□□ -2.39
SCN7AQ01118 AL158032.1-201ENST00000605401 106 ntBASIC0.13□□□□□ -2.39
SCN7AQ01118 AC019226.1-201ENST00000625666 515 ntBASIC0.13□□□□□ -2.39
SCN7AQ01118 MIR411-201ENST00000362239 96 ntBASIC0.12□□□□□ -2.39
SCN7AQ01118 RNU6-619P-201ENST00000365146 108 ntBASIC0.12□□□□□ -2.39
SCN7AQ01118 RNU6-658P-201ENST00000384606 106 ntBASIC0.12□□□□□ -2.39
SCN7AQ01118 MIR329-1-201ENST00000385028 80 ntBASIC0.12□□□□□ -2.39
SCN7AQ01118 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
SCN7AQ01118 AL022718.1-201ENST00000412004 84 ntBASIC0.12□□□□□ -2.39
SCN7AQ01118 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.12□□□□□ -2.39
SCN7AQ01118 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.12□□□□□ -2.39
SCN7AQ01118 AC118282.2-201ENST00000508739 374 ntBASIC0.12□□□□□ -2.39
SCN7AQ01118 AC087897.1-201ENST00000550134 156 ntBASIC0.12□□□□□ -2.39
SCN7AQ01118 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.12□□□□□ -2.39
SCN7AQ01118 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
SCN7AQ01118 EIF1P4-201ENST00000572664 335 ntBASIC0.12□□□□□ -2.39
SCN7AQ01118 SNRPEP3-201ENST00000338402 276 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 RNU6-910P-201ENST00000390844 107 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.11□□□□□ -2.39
SCN7AQ01118 AC063976.4-201ENST00000421971 163 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.11□□□□□ -2.39
SCN7AQ01118 AC002429.1-201ENST00000437672 148 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 AC002542.1-201ENST00000440683 193 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 BRK1P2-201ENST00000442875 223 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 AL606662.1-201ENST00000445763 553 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 MTND1P9-201ENST00000453775 944 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 AC013828.1-201ENST00000481845 158 ntBASIC0.11□□□□□ -2.39
SCN7AQ01118 MTND1P3-201ENST00000484956 952 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms