Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
GABREP78334 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
GABREP78334 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
GABREP78334 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.65□□□□□ -1.83
GABREP78334 Y_RNA.210-201ENST00000364161 110 ntBASIC3.65□□□□□ -1.83
GABREP78334 RNU6-487P-201ENST00000365430 104 ntBASIC3.65□□□□□ -1.83
GABREP78334 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
GABREP78334 SNORA29-201ENST00000384183 140 ntBASIC3.65□□□□□ -1.83
GABREP78334 RNU6-622P-201ENST00000384272 103 ntBASIC3.65□□□□□ -1.83
GABREP78334 Y_RNA.574-201ENST00000384766 95 ntBASIC3.65□□□□□ -1.83
GABREP78334 MIR32-201ENST00000384965 70 ntBASIC3.65□□□□□ -1.83
GABREP78334 MIR147B-201ENST00000390185 80 ntBASIC3.65□□□□□ -1.83
GABREP78334 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
GABREP78334 AL133475.1-201ENST00000404414 305 ntBASIC3.65□□□□□ -1.83
GABREP78334 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.65□□□□□ -1.83
GABREP78334 AC087477.1-201ENST00000465747 340 ntBASIC3.65□□□□□ -1.83
GABREP78334 RPS4XP22-201ENST00000480755 780 ntBASIC3.65□□□□□ -1.83
GABREP78334 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.65□□□□□ -1.83
GABREP78334 AC025554.1-201ENST00000505641 188 ntBASIC3.65□□□□□ -1.83
GABREP78334 RNA5SP164-201ENST00000516533 110 ntBASIC3.65□□□□□ -1.83
GABREP78334 AC011471.1-201ENST00000585766 187 ntBASIC3.65□□□□□ -1.83
GABREP78334 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.65□□□□□ -1.83
GABREP78334 AL021879.1-201ENST00000611756 288 ntBASIC3.65□□□□□ -1.83
GABREP78334 SNORA43.4-201ENST00000629559 138 ntBASIC3.65□□□□□ -1.83
GABREP78334 AC243829.7-201ENST00000633081 225 ntBASIC3.65□□□□□ -1.83
GABREP78334 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.65□□□□□ -1.83
GABREP78334 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.65□□□□□ -1.83
GABREP78334 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
GABREP78334 AL353743.1-202ENST00000431724 1695 ntBASIC3.65□□□□□ -1.83
GABREP78334 AL079305.1-201ENST00000623159 3008 ntBASIC3.65□□□□□ -1.83
GABREP78334 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
GABREP78334 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
GABREP78334 RNU4-50P-201ENST00000364361 141 ntBASIC3.64□□□□□ -1.83
GABREP78334 RNA5SP51-201ENST00000364750 119 ntBASIC3.64□□□□□ -1.83
GABREP78334 RNU6-748P-201ENST00000384648 107 ntBASIC3.64□□□□□ -1.83
GABREP78334 AC244670.1-201ENST00000436879 112 ntBASIC3.64□□□□□ -1.83
GABREP78334 IPO7P1-201ENST00000442031 636 ntBASIC3.64□□□□□ -1.83
GABREP78334 SNORA59A-201ENST00000459326 152 ntBASIC3.64□□□□□ -1.83
GABREP78334 AF186996.7-201ENST00000492781 209 ntBASIC3.64□□□□□ -1.83
GABREP78334 AC025281.1-201ENST00000567026 265 ntBASIC3.64□□□□□ -1.83
GABREP78334 MIR3149-201ENST00000584629 83 ntBASIC3.64□□□□□ -1.83
GABREP78334 AL133393.1-201ENST00000603277 287 ntBASIC3.64□□□□□ -1.83
GABREP78334 AC012603.1-201ENST00000606424 528 ntBASIC3.64□□□□□ -1.83
GABREP78334 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.64□□□□□ -1.83
GABREP78334 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
GABREP78334 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
GABREP78334 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.64□□□□□ -1.83
GABREP78334 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GABREP78334 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GABREP78334 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.63□□□□□ -1.83
GABREP78334 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GABREP78334 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
GABREP78334 U3.13-201ENST00000364804 214 ntBASIC3.63□□□□□ -1.83
GABREP78334 SET-203ENST00000372688 801 ntTSL 2 BASIC3.63□□□□□ -1.83
GABREP78334 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
GABREP78334 RNU6-750P-201ENST00000390946 107 ntBASIC3.63□□□□□ -1.83
GABREP78334 SNORA3C-201ENST00000408792 125 ntBASIC3.63□□□□□ -1.83
GABREP78334 RNU6-1140P-201ENST00000410517 106 ntBASIC3.63□□□□□ -1.83
GABREP78334 AC096649.2-201ENST00000416186 393 ntBASIC3.63□□□□□ -1.83
GABREP78334 AC138623.1-201ENST00000418060 216 ntBASIC3.63□□□□□ -1.83
GABREP78334 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
GABREP78334 RPL21P2-201ENST00000440049 481 ntBASIC3.63□□□□□ -1.83
GABREP78334 ANXA2P1-201ENST00000505539 926 ntBASIC3.63□□□□□ -1.83
GABREP78334 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.63□□□□□ -1.83
GABREP78334 RNU6-1231P-201ENST00000517185 103 ntBASIC3.63□□□□□ -1.83
GABREP78334 IGKV2-38-201ENST00000517443 247 ntBASIC3.63□□□□□ -1.83
GABREP78334 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.63□□□□□ -1.83
GABREP78334 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.63□□□□□ -1.83
GABREP78334 AC105137.2-201ENST00000569073 466 ntBASIC3.63□□□□□ -1.83
GABREP78334 AL390123.1-201ENST00000603216 237 ntBASIC3.63□□□□□ -1.83
GABREP78334 AC005000.2-201ENST00000605468 310 ntBASIC3.63□□□□□ -1.83
GABREP78334 AL359198.2-201ENST00000611836 194 ntBASIC3.63□□□□□ -1.83
GABREP78334 RMST_6.1-201ENST00000611980 203 ntBASIC3.63□□□□□ -1.83
GABREP78334 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.63□□□□□ -1.83
GABREP78334 ZNF962P-201ENST00000443465 3140 ntBASIC3.63□□□□□ -1.83
GABREP78334 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
GABREP78334 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
GABREP78334 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.62□□□□□ -1.83
GABREP78334 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
GABREP78334 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
GABREP78334 Y_RNA.111-201ENST00000363248 100 ntBASIC3.62□□□□□ -1.83
GABREP78334 SNORA63.7-201ENST00000365579 123 ntBASIC3.62□□□□□ -1.83
GABREP78334 RNU6-708P-201ENST00000384217 107 ntBASIC3.62□□□□□ -1.83
GABREP78334 Y_RNA.551-201ENST00000384661 102 ntBASIC3.62□□□□□ -1.83
GABREP78334 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
GABREP78334 RNU6-1109P-201ENST00000391187 107 ntBASIC3.62□□□□□ -1.83
GABREP78334 RN7SKP61-201ENST00000410642 295 ntBASIC3.62□□□□□ -1.83
GABREP78334 ATP5A1P2-201ENST00000412323 255 ntBASIC3.62□□□□□ -1.83
GABREP78334 AC078809.1-201ENST00000427601 140 ntBASIC3.62□□□□□ -1.83
GABREP78334 AC011742.1-201ENST00000431448 434 ntBASIC3.62□□□□□ -1.83
GABREP78334 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.62□□□□□ -1.83
GABREP78334 AC083863.1-201ENST00000438811 231 ntBASIC3.62□□□□□ -1.83
GABREP78334 RNU5B-3P-201ENST00000516601 115 ntBASIC3.62□□□□□ -1.83
GABREP78334 AC016256.1-201ENST00000547971 354 ntBASIC3.62□□□□□ -1.83
GABREP78334 GNRHR2P1-201ENST00000555315 631 ntBASIC3.62□□□□□ -1.83
GABREP78334 AL591424.2-201ENST00000617023 128 ntBASIC3.62□□□□□ -1.83
GABREP78334 AC007792.1-201ENST00000623023 402 ntBASIC3.62□□□□□ -1.83
GABREP78334 AC091903.1-201ENST00000624322 454 ntBASIC3.62□□□□□ -1.83
GABREP78334 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
GABREP78334 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms