Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AMZ2P1-203ENST00000565833 850 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.75□□□□□ -1.81
HERVK_113P62684 VN1R107P-201ENST00000601784 209 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 AC016727.2-201ENST00000603988 621 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 AL355297.3-201ENST00000604082 446 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 AL355598.1-201ENST00000604169 202 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 Z98751.3-201ENST00000604447 521 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 AC100812.1-201ENST00000607622 580 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 AC093732.2-201ENST00000607950 274 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 FTX_3.1-201ENST00000610451 147 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 SCARNA4-202ENST00000625402 129 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 U4.7-201ENST00000638126 106 ntBASIC3.75□□□□□ -1.81
HERVK_113P62684 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
HERVK_113P62684 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HERVK_113P62684 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.74□□□□□ -1.81
HERVK_113P62684 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.74□□□□□ -1.81
HERVK_113P62684 RNU1-75P-201ENST00000347264 129 ntBASIC3.74□□□□□ -1.81
HERVK_113P62684 RNU6-595P-201ENST00000363944 107 ntBASIC3.74□□□□□ -1.81
HERVK_113P62684 RNU6-336P-201ENST00000364891 107 ntBASIC3.74□□□□□ -1.81
HERVK_113P62684 RNU6-1109P-201ENST00000391187 107 ntBASIC3.74□□□□□ -1.81
HERVK_113P62684 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.74□□□□□ -1.81
HERVK_113P62684 AC126124.2-201ENST00000413542 321 ntBASIC3.74□□□□□ -1.81
HERVK_113P62684 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.74□□□□□ -1.81
HERVK_113P62684 YPEL5P1-201ENST00000419731 367 ntBASIC3.74□□□□□ -1.81
HERVK_113P62684 MTND5P27-201ENST00000428871 1720 ntBASIC3.74□□□□□ -1.81
HERVK_113P62684 RPL21P2-201ENST00000440049 481 ntBASIC3.74□□□□□ -1.81
HERVK_113P62684 AC025750.2-201ENST00000442609 450 ntBASIC3.74□□□□□ -1.81
HERVK_113P62684 HIGD1AP2-201ENST00000446367 280 ntBASIC3.74□□□□□ -1.81
HERVK_113P62684 RPL23AP67-201ENST00000465341 474 ntBASIC3.74□□□□□ -1.81
HERVK_113P62684 SNORA40.14-201ENST00000516543 86 ntBASIC3.74□□□□□ -1.81
HERVK_113P62684 RNU6-1282P-201ENST00000516735 96 ntBASIC3.74□□□□□ -1.81
HERVK_113P62684 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.74□□□□□ -1.81
HERVK_113P62684 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.74□□□□□ -1.81
HERVK_113P62684 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.74□□□□□ -1.81
HERVK_113P62684 CYCSP39-201ENST00000565821 309 ntBASIC3.74□□□□□ -1.81
HERVK_113P62684 MIR2682-201ENST00000580305 110 ntBASIC3.74□□□□□ -1.81
HERVK_113P62684 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.74□□□□□ -1.81
HERVK_113P62684 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
HERVK_113P62684 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.74□□□□□ -1.81
HERVK_113P62684 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HERVK_113P62684 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.73□□□□□ -1.81
HERVK_113P62684 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HERVK_113P62684 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
HERVK_113P62684 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HERVK_113P62684 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
HERVK_113P62684 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
HERVK_113P62684 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HERVK_113P62684 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.73□□□□□ -1.81
HERVK_113P62684 SNORD50.1-201ENST00000362987 71 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 Y_RNA.123-201ENST00000363338 102 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 RNU6-527P-201ENST00000363425 104 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 RNU6-898P-201ENST00000365627 104 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 RNU6-217P-201ENST00000384164 104 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 MIR1252-201ENST00000408861 65 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 Y_RNA.618-201ENST00000410949 107 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 HMGN2P30-201ENST00000423237 256 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 RPL23AP82-202ENST00000427528 469 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.73□□□□□ -1.81
HERVK_113P62684 AC013470.1-201ENST00000453438 462 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.73□□□□□ -1.81
HERVK_113P62684 CENPBD1P1-201ENST00000464061 469 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.73□□□□□ -1.81
HERVK_113P62684 RPS4XP22-201ENST00000480755 780 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 AC008885.1-201ENST00000514930 301 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 SNORA70.14-201ENST00000516205 110 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 RNU6-703P-201ENST00000516946 107 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 Y_RNA.715-201ENST00000517082 110 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.73□□□□□ -1.81
HERVK_113P62684 LINC00933-203ENST00000559812 219 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.73□□□□□ -1.81
HERVK_113P62684 MIR5696-201ENST00000578474 85 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 VN1R91P-201ENST00000594377 169 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 AC008962.1-201ENST00000605729 304 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 AC005046.1-201ENST00000608515 625 ntBASIC3.73□□□□□ -1.81
HERVK_113P62684 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HERVK_113P62684 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
HERVK_113P62684 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HERVK_113P62684 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.72□□□□□ -1.81
HERVK_113P62684 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HERVK_113P62684 RNU6-227P-201ENST00000362865 103 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 RNU6-884P-201ENST00000363889 107 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 SNORA7.4-201ENST00000384249 137 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 SNORA51.11-201ENST00000384442 131 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 MIR628-201ENST00000385229 95 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 AP000567.1-201ENST00000406413 156 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 U3.37-201ENST00000408528 213 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 RNA5SP494-201ENST00000410653 129 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 AC107083.1-201ENST00000439643 279 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.72□□□□□ -1.81
HERVK_113P62684 RPL23AP49-201ENST00000492925 468 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 AC009812.2-201ENST00000517657 457 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 AC020895.1-201ENST00000595362 272 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 AC009318.2-201ENST00000610917 651 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 AL021879.1-201ENST00000611756 288 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 uc_338.1-201ENST00000612113 180 ntBASIC3.72□□□□□ -1.81
HERVK_113P62684 MIR7106-201ENST00000612419 65 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms