Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SNORA71.2-201ENST00000364941 134 ntBASIC4.84□□□□□ -1.63
USP46P62068 Y_RNA.456-201ENST00000384232 111 ntBASIC4.84□□□□□ -1.63
USP46P62068 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.84□□□□□ -1.63
USP46P62068 AL357134.1-201ENST00000445848 426 ntBASIC4.84□□□□□ -1.63
USP46P62068 RPS27P1-201ENST00000450552 247 ntBASIC4.84□□□□□ -1.63
USP46P62068 AC084357.1-201ENST00000473404 255 ntBASIC4.84□□□□□ -1.63
USP46P62068 RNA5SP170-201ENST00000517150 101 ntBASIC4.84□□□□□ -1.63
USP46P62068 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.84□□□□□ -1.63
USP46P62068 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.84□□□□□ -1.63
USP46P62068 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
USP46P62068 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
USP46P62068 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP46P62068 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP46P62068 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP46P62068 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
USP46P62068 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP46P62068 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
USP46P62068 RNA5SP447-201ENST00000363749 119 ntBASIC4.83□□□□□ -1.64
USP46P62068 Y_RNA.310-201ENST00000365063 113 ntBASIC4.83□□□□□ -1.64
USP46P62068 SNORA18.2-201ENST00000383865 132 ntBASIC4.83□□□□□ -1.64
USP46P62068 RNU6-1228P-201ENST00000391014 107 ntBASIC4.83□□□□□ -1.64
USP46P62068 TOMM22P2-201ENST00000430735 237 ntBASIC4.83□□□□□ -1.64
USP46P62068 AC078817.1-201ENST00000492623 435 ntBASIC4.83□□□□□ -1.64
USP46P62068 RNA5SP468-201ENST00000516782 93 ntBASIC4.83□□□□□ -1.64
USP46P62068 AC090049.2-201ENST00000550377 109 ntBASIC4.83□□□□□ -1.64
USP46P62068 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.83□□□□□ -1.64
USP46P62068 MTND5P34-201ENST00000568888 325 ntBASIC4.83□□□□□ -1.64
USP46P62068 MIR4277-201ENST00000578298 84 ntBASIC4.83□□□□□ -1.64
USP46P62068 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.83□□□□□ -1.64
USP46P62068 NOL8P1-201ENST00000508336 3529 ntBASIC4.83□□□□□ -1.64
USP46P62068 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP46P62068 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP46P62068 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP46P62068 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
USP46P62068 OR56B2P-202ENST00000641377 2453 ntBASIC4.83□□□□□ -1.64
USP46P62068 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP46P62068 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.83□□□□□ -1.64
USP46P62068 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
USP46P62068 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.82□□□□□ -1.64
USP46P62068 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP46P62068 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP46P62068 RNU6-915P-201ENST00000364943 103 ntBASIC4.82□□□□□ -1.64
USP46P62068 Y_RNA.393-201ENST00000383936 102 ntBASIC4.82□□□□□ -1.64
USP46P62068 Z98745.1-201ENST00000402553 494 ntBASIC4.82□□□□□ -1.64
USP46P62068 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.82□□□□□ -1.64
USP46P62068 CYCSP48-201ENST00000417124 323 ntBASIC4.82□□□□□ -1.64
USP46P62068 CYCSP49-201ENST00000420810 319 ntBASIC4.82□□□□□ -1.64
USP46P62068 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.82□□□□□ -1.64
USP46P62068 AL162591.2-201ENST00000449634 317 ntBASIC4.82□□□□□ -1.64
USP46P62068 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.82□□□□□ -1.64
USP46P62068 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.82□□□□□ -1.64
USP46P62068 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.82□□□□□ -1.64
USP46P62068 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.82□□□□□ -1.64
USP46P62068 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.82□□□□□ -1.64
USP46P62068 BMS1P21-201ENST00000634565 365 ntBASIC4.82□□□□□ -1.64
USP46P62068 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.82□□□□□ -1.64
USP46P62068 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP46P62068 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP46P62068 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP46P62068 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
USP46P62068 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.81□□□□□ -1.64
USP46P62068 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP46P62068 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.81□□□□□ -1.64
USP46P62068 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
USP46P62068 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP46P62068 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP46P62068 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
USP46P62068 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
USP46P62068 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
USP46P62068 RNU6-1144P-201ENST00000384247 104 ntBASIC4.81□□□□□ -1.64
USP46P62068 RNA5SP504-201ENST00000410676 117 ntBASIC4.81□□□□□ -1.64
USP46P62068 HSPE1P12-201ENST00000412576 301 ntBASIC4.81□□□□□ -1.64
USP46P62068 AC009237.10-201ENST00000414112 510 ntBASIC4.81□□□□□ -1.64
USP46P62068 AL365496.1-201ENST00000426885 215 ntBASIC4.81□□□□□ -1.64
USP46P62068 HSPE1P21-201ENST00000438283 308 ntBASIC4.81□□□□□ -1.64
USP46P62068 AL353748.1-201ENST00000440753 474 ntBASIC4.81□□□□□ -1.64
USP46P62068 RPL23AP93-201ENST00000440847 484 ntBASIC4.81□□□□□ -1.64
USP46P62068 RPS29P2-201ENST00000479278 136 ntBASIC4.81□□□□□ -1.64
USP46P62068 RN7SKP289-201ENST00000517244 295 ntBASIC4.81□□□□□ -1.64
USP46P62068 EIF4A1P12-201ENST00000551910 141 ntBASIC4.81□□□□□ -1.64
USP46P62068 AC127455.1-201ENST00000565496 145 ntBASIC4.81□□□□□ -1.64
USP46P62068 HMGN2P15-201ENST00000585707 270 ntBASIC4.81□□□□□ -1.64
USP46P62068 AL670379.2-201ENST00000604983 252 ntBASIC4.81□□□□□ -1.64
USP46P62068 U6.115-201ENST00000636045 103 ntBASIC4.81□□□□□ -1.64
USP46P62068 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.81□□□□□ -1.64
USP46P62068 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.81□□□□□ -1.64
USP46P62068 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.81□□□□□ -1.64
USP46P62068 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.81□□□□□ -1.64
USP46P62068 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
USP46P62068 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP46P62068 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP46P62068 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.8□□□□□ -1.64
USP46P62068 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP46P62068 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
USP46P62068 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP46P62068 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.8□□□□□ -1.64
USP46P62068 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
USP46P62068 RNU6-529P-201ENST00000363383 104 ntBASIC4.8□□□□□ -1.64
USP46P62068 RNY1P11-201ENST00000363759 113 ntBASIC4.8□□□□□ -1.64
USP46P62068 SNORA1.3-201ENST00000384676 136 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms