Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RTP1P59025 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.99□□□□□ -1.77
RTP1P59025 USP8P1-201ENST00000494673 3183 ntBASIC3.99□□□□□ -1.77
RTP1P59025 AL157777.2-201ENST00000258070 137 ntBASIC3.99□□□□□ -1.77
RTP1P59025 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RTP1P59025 Y_RNA.54-201ENST00000362766 105 ntBASIC3.99□□□□□ -1.77
RTP1P59025 SNORD81.1-201ENST00000363064 77 ntBASIC3.99□□□□□ -1.77
RTP1P59025 Y_RNA.123-201ENST00000363338 102 ntBASIC3.99□□□□□ -1.77
RTP1P59025 Y_RNA.143-201ENST00000363520 106 ntBASIC3.99□□□□□ -1.77
RTP1P59025 RNU6-335P-201ENST00000364563 113 ntBASIC3.99□□□□□ -1.77
RTP1P59025 SNORD17-201ENST00000390930 237 ntBASIC3.99□□□□□ -1.77
RTP1P59025 RPS29P13-201ENST00000402041 169 ntBASIC3.99□□□□□ -1.77
RTP1P59025 TMEM167AP1-201ENST00000423409 219 ntBASIC3.99□□□□□ -1.77
RTP1P59025 AC007560.1-201ENST00000426912 237 ntBASIC3.99□□□□□ -1.77
RTP1P59025 FTH1P6-201ENST00000430768 320 ntBASIC3.99□□□□□ -1.77
RTP1P59025 BX679664.1-201ENST00000434429 253 ntBASIC3.99□□□□□ -1.77
RTP1P59025 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.99□□□□□ -1.77
RTP1P59025 RPS23P5-201ENST00000495419 428 ntBASIC3.99□□□□□ -1.77
RTP1P59025 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.99□□□□□ -1.77
RTP1P59025 PHBP14-201ENST00000512887 367 ntBASIC3.99□□□□□ -1.77
RTP1P59025 RN7SKP83-201ENST00000516512 178 ntBASIC3.99□□□□□ -1.77
RTP1P59025 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.99□□□□□ -1.77
RTP1P59025 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.99□□□□□ -1.77
RTP1P59025 U4.7-201ENST00000638126 106 ntBASIC3.99□□□□□ -1.77
RTP1P59025 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.99□□□□□ -1.77
RTP1P59025 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RTP1P59025 Y_RNA.269-201ENST00000364685 89 ntBASIC3.98□□□□□ -1.77
RTP1P59025 RNU6-336P-201ENST00000364891 107 ntBASIC3.98□□□□□ -1.77
RTP1P59025 MIR34A-201ENST00000385130 110 ntBASIC3.98□□□□□ -1.77
RTP1P59025 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.98□□□□□ -1.77
RTP1P59025 AL139156.1-201ENST00000412785 841 ntBASIC3.98□□□□□ -1.77
RTP1P59025 RPL27AP8-201ENST00000424277 446 ntBASIC3.98□□□□□ -1.77
RTP1P59025 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.98□□□□□ -1.77
RTP1P59025 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.98□□□□□ -1.77
RTP1P59025 AC092798.1-201ENST00000458542 409 ntBASIC3.98□□□□□ -1.77
RTP1P59025 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.98□□□□□ -1.77
RTP1P59025 AC023141.12-201ENST00000512399 199 ntBASIC3.98□□□□□ -1.77
RTP1P59025 RNU7-175P-201ENST00000515915 61 ntBASIC3.98□□□□□ -1.77
RTP1P59025 Vault.1-201ENST00000516474 102 ntBASIC3.98□□□□□ -1.77
RTP1P59025 RNU6-572P-201ENST00000516724 80 ntBASIC3.98□□□□□ -1.77
RTP1P59025 Y_RNA.706-201ENST00000516933 99 ntBASIC3.98□□□□□ -1.77
RTP1P59025 LARP7P3-201ENST00000579888 337 ntBASIC3.98□□□□□ -1.77
RTP1P59025 RPL23AP78-201ENST00000599928 470 ntBASIC3.98□□□□□ -1.77
RTP1P59025 BX284668.6-201ENST00000606899 438 ntBASIC3.98□□□□□ -1.77
RTP1P59025 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.98□□□□□ -1.77
RTP1P59025 AC006386.2-201ENST00000624491 75 ntBASIC3.98□□□□□ -1.77
RTP1P59025 AC012005.1-201ENST00000624575 75 ntBASIC3.98□□□□□ -1.77
RTP1P59025 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RTP1P59025 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RTP1P59025 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.97□□□□□ -1.77
RTP1P59025 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
RTP1P59025 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
RTP1P59025 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RTP1P59025 AC004944.1-201ENST00000517807 3059 ntBASIC3.97□□□□□ -1.77
RTP1P59025 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RTP1P59025 RNU6-1266P-201ENST00000362794 105 ntBASIC3.97□□□□□ -1.77
RTP1P59025 RNU5E-7P-201ENST00000365290 117 ntBASIC3.97□□□□□ -1.77
RTP1P59025 Y_RNA.541-201ENST00000384640 113 ntBASIC3.97□□□□□ -1.77
RTP1P59025 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.97□□□□□ -1.77
RTP1P59025 AC006989.1-201ENST00000427212 131 ntBASIC3.97□□□□□ -1.77
RTP1P59025 AL356867.1-201ENST00000429623 299 ntBASIC3.97□□□□□ -1.77
RTP1P59025 AL078601.1-201ENST00000444542 271 ntBASIC3.97□□□□□ -1.77
RTP1P59025 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.97□□□□□ -1.77
RTP1P59025 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.97□□□□□ -1.77
RTP1P59025 ANP32BP2-201ENST00000454525 545 ntBASIC3.97□□□□□ -1.77
RTP1P59025 snoU109.2-201ENST00000459316 135 ntBASIC3.97□□□□□ -1.77
RTP1P59025 KC877373.1-201ENST00000479066 408 ntBASIC3.97□□□□□ -1.77
RTP1P59025 RN7SL504P-201ENST00000494496 287 ntBASIC3.97□□□□□ -1.77
RTP1P59025 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.97□□□□□ -1.77
RTP1P59025 ANXA2P1-201ENST00000505539 926 ntBASIC3.97□□□□□ -1.77
RTP1P59025 RNA5SP165-201ENST00000517142 115 ntBASIC3.97□□□□□ -1.77
RTP1P59025 MIR2355-201ENST00000517199 87 ntBASIC3.97□□□□□ -1.77
RTP1P59025 CASP1P1-201ENST00000526345 212 ntBASIC3.97□□□□□ -1.77
RTP1P59025 AC060766.3-201ENST00000591442 263 ntBASIC3.97□□□□□ -1.77
RTP1P59025 SNRPGP15-201ENST00000600149 222 ntBASIC3.97□□□□□ -1.77
RTP1P59025 AP003355.3-201ENST00000623465 114 ntBASIC3.97□□□□□ -1.77
RTP1P59025 AC244205.2-202ENST00000635781 342 ntBASIC3.97□□□□□ -1.77
RTP1P59025 AL365361.1-201ENST00000566942 3481 ntBASIC3.97□□□□□ -1.77
RTP1P59025 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.97□□□□□ -1.77
RTP1P59025 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
RTP1P59025 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RTP1P59025 MFSD8-233ENST00000641482 4860 ntBASIC3.97□□□□□ -1.77
RTP1P59025 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.97□□□□□ -1.77
RTP1P59025 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
RTP1P59025 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.96□□□□□ -1.77
RTP1P59025 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RTP1P59025 AL356274.2-201ENST00000624379 3752 ntBASIC3.96□□□□□ -1.78
RTP1P59025 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
RTP1P59025 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.96□□□□□ -1.78
RTP1P59025 RNA5SP42-201ENST00000364278 115 ntBASIC3.96□□□□□ -1.78
RTP1P59025 Y_RNA.270-201ENST00000364693 104 ntBASIC3.96□□□□□ -1.78
RTP1P59025 RNU6-886P-201ENST00000384319 105 ntBASIC3.96□□□□□ -1.78
RTP1P59025 Y_RNA.581-201ENST00000391017 97 ntBASIC3.96□□□□□ -1.78
RTP1P59025 AL079342.1-201ENST00000401460 267 ntBASIC3.96□□□□□ -1.78
RTP1P59025 U3.39-201ENST00000408569 239 ntBASIC3.96□□□□□ -1.78
RTP1P59025 RNU2-20P-201ENST00000410425 191 ntBASIC3.96□□□□□ -1.78
RTP1P59025 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.96□□□□□ -1.78
RTP1P59025 AC104332.1-201ENST00000440471 797 ntBASIC3.96□□□□□ -1.78
RTP1P59025 PIGFP3-201ENST00000441918 722 ntBASIC3.96□□□□□ -1.78
RTP1P59025 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms