Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.79□□□□□ -2.12
PKNOX1P55347 AC002543.1-201ENST00000299783 1954 ntBASIC1.79□□□□□ -2.12
PKNOX1P55347 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.79□□□□□ -2.12
PKNOX1P55347 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
PKNOX1P55347 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
PKNOX1P55347 RNU6-1159P-201ENST00000362933 107 ntBASIC1.78□□□□□ -2.12
PKNOX1P55347 RNU6-944P-201ENST00000364023 107 ntBASIC1.78□□□□□ -2.12
PKNOX1P55347 Y_RNA.324-201ENST00000365165 102 ntBASIC1.78□□□□□ -2.12
PKNOX1P55347 SNORD116-8-201ENST00000384365 95 ntBASIC1.78□□□□□ -2.12
PKNOX1P55347 RNU4-46P-201ENST00000410818 138 ntBASIC1.78□□□□□ -2.12
PKNOX1P55347 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
PKNOX1P55347 MTCO2P11-201ENST00000431069 680 ntBASIC1.78□□□□□ -2.12
PKNOX1P55347 AC132479.1-201ENST00000449160 144 ntBASIC1.78□□□□□ -2.12
PKNOX1P55347 MTND1P27-201ENST00000451117 902 ntBASIC1.78□□□□□ -2.12
PKNOX1P55347 RNU6-430P-201ENST00000517078 107 ntBASIC1.78□□□□□ -2.12
PKNOX1P55347 RNU6-667P-201ENST00000517186 102 ntBASIC1.78□□□□□ -2.12
PKNOX1P55347 AP003392.2-201ENST00000527269 208 ntBASIC1.78□□□□□ -2.12
PKNOX1P55347 AP002963.1-201ENST00000530590 184 ntBASIC1.78□□□□□ -2.12
PKNOX1P55347 OSBPL9P5-201ENST00000542581 171 ntBASIC1.78□□□□□ -2.12
PKNOX1P55347 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.78□□□□□ -2.12
PKNOX1P55347 MIR4419B-201ENST00000577260 68 ntBASIC1.78□□□□□ -2.12
PKNOX1P55347 AC024614.2-201ENST00000577584 372 ntBASIC1.78□□□□□ -2.12
PKNOX1P55347 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.78□□□□□ -2.12
PKNOX1P55347 AC078795.2-201ENST00000602835 1252 ntBASIC1.78□□□□□ -2.12
PKNOX1P55347 AL590229.1-201ENST00000603497 542 ntBASIC1.78□□□□□ -2.12
PKNOX1P55347 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
PKNOX1P55347 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.77□□□□□ -2.13
PKNOX1P55347 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PKNOX1P55347 AC019129.1-201ENST00000403786 261 ntBASIC1.77□□□□□ -2.13
PKNOX1P55347 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.77□□□□□ -2.13
PKNOX1P55347 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.77□□□□□ -2.13
PKNOX1P55347 MTND4P32-201ENST00000437189 1237 ntBASIC1.77□□□□□ -2.13
PKNOX1P55347 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.77□□□□□ -2.13
PKNOX1P55347 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.77□□□□□ -2.13
PKNOX1P55347 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.77□□□□□ -2.13
PKNOX1P55347 AC098862.1-201ENST00000504991 413 ntBASIC1.77□□□□□ -2.13
PKNOX1P55347 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.77□□□□□ -2.13
PKNOX1P55347 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.77□□□□□ -2.13
PKNOX1P55347 AP005435.4-201ENST00000529514 284 ntBASIC1.77□□□□□ -2.13
PKNOX1P55347 AP000763.2-201ENST00000540641 163 ntBASIC1.77□□□□□ -2.13
PKNOX1P55347 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.77□□□□□ -2.13
PKNOX1P55347 SUB1P2-201ENST00000556401 297 ntBASIC1.77□□□□□ -2.13
PKNOX1P55347 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.77□□□□□ -2.13
PKNOX1P55347 MIR4528-201ENST00000577763 90 ntBASIC1.77□□□□□ -2.13
PKNOX1P55347 AC026271.5-201ENST00000577873 130 ntBASIC1.77□□□□□ -2.13
PKNOX1P55347 AC008088.1-201ENST00000580993 280 ntBASIC1.77□□□□□ -2.13
PKNOX1P55347 AC025449.1-201ENST00000603896 529 ntBASIC1.77□□□□□ -2.13
PKNOX1P55347 AL136363.2-201ENST00000604173 851 ntBASIC1.77□□□□□ -2.13
PKNOX1P55347 AC005034.5-201ENST00000604219 466 ntBASIC1.77□□□□□ -2.13
PKNOX1P55347 AC123912.5-201ENST00000605470 343 ntBASIC1.77□□□□□ -2.13
PKNOX1P55347 AC109347.2-201ENST00000610220 349 ntBASIC1.77□□□□□ -2.13
PKNOX1P55347 AL158063.1-201ENST00000615349 536 ntBASIC1.77□□□□□ -2.13
PKNOX1P55347 AC005296.1-201ENST00000616145 209 ntBASIC1.77□□□□□ -2.13
PKNOX1P55347 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.77□□□□□ -2.13
PKNOX1P55347 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.77□□□□□ -2.13
PKNOX1P55347 AL390237.1-201ENST00000404226 1415 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 snoU2_19.1-201ENST00000362361 80 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RNU6-37P-201ENST00000362692 107 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 Y_RNA.159-201ENST00000363674 87 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RNU6-105P-201ENST00000363909 104 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RNU6-11P-201ENST00000364234 107 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 U3.13-201ENST00000364804 214 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RNU6-25P-201ENST00000383873 107 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RNU6-1-201ENST00000383898 107 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 SNORA75-201ENST00000384158 137 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RNU6-48P-201ENST00000384161 107 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RNU6-36P-201ENST00000384172 107 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RNU6-4P-201ENST00000384205 107 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RNU6-5P-201ENST00000384238 107 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RNU6-3P-201ENST00000384314 107 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RNU6-16P-201ENST00000384385 107 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RNU6-15P-201ENST00000384534 107 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RNU6-1127P-201ENST00000384580 107 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RNU6-2-201ENST00000384627 107 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RNU6-29P-201ENST00000384637 107 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RNU6-606P-201ENST00000384721 111 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RNU6-9-201ENST00000384776 107 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RNU6-33P-201ENST00000384793 107 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 SNORA16.2-201ENST00000390991 127 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RNU2-9P-201ENST00000410194 145 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RNU2-32P-201ENST00000411193 191 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.76□□□□□ -2.13
PKNOX1P55347 RPL31P63-201ENST00000422565 375 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 AL353689.1-201ENST00000438895 199 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.76□□□□□ -2.13
PKNOX1P55347 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.76□□□□□ -2.13
PKNOX1P55347 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.76□□□□□ -2.13
PKNOX1P55347 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.76□□□□□ -2.13
PKNOX1P55347 AC022364.2-201ENST00000457963 554 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 AC006512.1-201ENST00000468816 291 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RPL30P1-201ENST00000488676 339 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 HMGB1P35-201ENST00000503360 598 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 ARL2BPP4-201ENST00000506854 471 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
PKNOX1P55347 AC010486.1-201ENST00000511793 424 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 Y_RNA.695-201ENST00000516715 107 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 RN7SKP256-201ENST00000517201 314 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 MTCO2P4-201ENST00000517968 247 ntBASIC1.76□□□□□ -2.13
PKNOX1P55347 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.76□□□□□ -2.13
PKNOX1P55347 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms