Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MIR126-201ENST00000362291 85 ntBASIC1.62□□□□□ -2.15
CDH6P55285 Y_RNA.560-201ENST00000384689 102 ntBASIC1.62□□□□□ -2.15
CDH6P55285 RNU6-997P-201ENST00000384725 107 ntBASIC1.62□□□□□ -2.15
CDH6P55285 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.62□□□□□ -2.15
CDH6P55285 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.62□□□□□ -2.15
CDH6P55285 AC009310.1-201ENST00000414414 451 ntBASIC1.62□□□□□ -2.15
CDH6P55285 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.62□□□□□ -2.15
CDH6P55285 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.62□□□□□ -2.15
CDH6P55285 AL591806.2-201ENST00000433122 173 ntBASIC1.62□□□□□ -2.15
CDH6P55285 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.62□□□□□ -2.15
CDH6P55285 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.62□□□□□ -2.15
CDH6P55285 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.62□□□□□ -2.15
CDH6P55285 RNU1-98P-201ENST00000458992 160 ntBASIC1.62□□□□□ -2.15
CDH6P55285 RPL30P6-201ENST00000475925 342 ntBASIC1.62□□□□□ -2.15
CDH6P55285 RAP1BP2-201ENST00000478270 544 ntBASIC1.62□□□□□ -2.15
CDH6P55285 MTND2P33-201ENST00000506452 1031 ntBASIC1.62□□□□□ -2.15
CDH6P55285 AC005178.1-201ENST00000508392 440 ntBASIC1.62□□□□□ -2.15
CDH6P55285 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.62□□□□□ -2.15
CDH6P55285 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.62□□□□□ -2.15
CDH6P55285 RNU6-1129P-201ENST00000515964 104 ntBASIC1.62□□□□□ -2.15
CDH6P55285 SCARNA24.1-201ENST00000516465 137 ntBASIC1.62□□□□□ -2.15
CDH6P55285 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.62□□□□□ -2.15
CDH6P55285 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.62□□□□□ -2.15
CDH6P55285 AC009094.1-201ENST00000564443 426 ntBASIC1.62□□□□□ -2.15
CDH6P55285 AC091135.1-201ENST00000585943 307 ntBASIC1.62□□□□□ -2.15
CDH6P55285 AC009977.1-201ENST00000586015 570 ntBASIC1.62□□□□□ -2.15
CDH6P55285 WISP1-OT1-201ENST00000602893 642 ntBASIC1.62□□□□□ -2.15
CDH6P55285 BX248123.2-201ENST00000606318 124 ntBASIC1.62□□□□□ -2.15
CDH6P55285 AC103810.8-201ENST00000607347 118 ntBASIC1.62□□□□□ -2.15
CDH6P55285 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.62□□□□□ -2.15
CDH6P55285 RMST_4.1-201ENST00000616886 107 ntBASIC1.62□□□□□ -2.15
CDH6P55285 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CDH6P55285 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
CDH6P55285 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
CDH6P55285 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.61□□□□□ -2.15
CDH6P55285 RNU6-78P-201ENST00000362897 107 ntBASIC1.61□□□□□ -2.15
CDH6P55285 RNU6-179P-201ENST00000363350 107 ntBASIC1.61□□□□□ -2.15
CDH6P55285 RNU6-743P-201ENST00000364151 106 ntBASIC1.61□□□□□ -2.15
CDH6P55285 Y_RNA.597-201ENST00000410463 100 ntBASIC1.61□□□□□ -2.15
CDH6P55285 RNA5SP501-201ENST00000410990 112 ntBASIC1.61□□□□□ -2.15
CDH6P55285 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.61□□□□□ -2.15
CDH6P55285 AL590556.1-201ENST00000423231 483 ntBASIC1.61□□□□□ -2.15
CDH6P55285 MTND4P20-201ENST00000424125 869 ntBASIC1.61□□□□□ -2.15
CDH6P55285 AC000111.3-201ENST00000433478 193 ntBASIC1.61□□□□□ -2.15
CDH6P55285 AC104850.1-201ENST00000435940 476 ntBASIC1.61□□□□□ -2.15
CDH6P55285 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.61□□□□□ -2.15
CDH6P55285 RPL39P29-201ENST00000447779 157 ntBASIC1.61□□□□□ -2.15
CDH6P55285 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.61□□□□□ -2.15
CDH6P55285 RNU7-125P-201ENST00000458760 62 ntBASIC1.61□□□□□ -2.15
CDH6P55285 MTCYBP40-201ENST00000509390 1135 ntBASIC1.61□□□□□ -2.15
CDH6P55285 AC008834.1-201ENST00000511612 175 ntBASIC1.61□□□□□ -2.15
CDH6P55285 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.61□□□□□ -2.15
CDH6P55285 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.61□□□□□ -2.15
CDH6P55285 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
CDH6P55285 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.61□□□□□ -2.15
CDH6P55285 uc_338.5-201ENST00000611839 155 ntBASIC1.61□□□□□ -2.15
CDH6P55285 AL133173.2-201ENST00000614270 90 ntBASIC1.61□□□□□ -2.15
CDH6P55285 AC009159.2-201ENST00000617603 606 ntBASIC1.61□□□□□ -2.15
CDH6P55285 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.61□□□□□ -2.15
CDH6P55285 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CDH6P55285 RNU5E-7P-201ENST00000365290 117 ntBASIC1.6□□□□□ -2.15
CDH6P55285 Y_RNA.598-201ENST00000410480 95 ntBASIC1.6□□□□□ -2.15
CDH6P55285 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.6□□□□□ -2.15
CDH6P55285 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.6□□□□□ -2.15
CDH6P55285 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.6□□□□□ -2.15
CDH6P55285 MTATP6P16-201ENST00000434543 526 ntBASIC1.6□□□□□ -2.15
CDH6P55285 AC007969.2-201ENST00000441891 191 ntBASIC1.6□□□□□ -2.15
CDH6P55285 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.6□□□□□ -2.15
CDH6P55285 AC027575.1-201ENST00000481064 460 ntBASIC1.6□□□□□ -2.15
CDH6P55285 AC093259.1-201ENST00000509755 300 ntBASIC1.6□□□□□ -2.15
CDH6P55285 AC096745.1-201ENST00000509945 370 ntBASIC1.6□□□□□ -2.15
CDH6P55285 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.6□□□□□ -2.15
CDH6P55285 FABP5P5-201ENST00000515537 406 ntBASIC1.6□□□□□ -2.15
CDH6P55285 RNU2-46P-201ENST00000517038 113 ntBASIC1.6□□□□□ -2.15
CDH6P55285 RNU6-685P-201ENST00000517088 95 ntBASIC1.6□□□□□ -2.15
CDH6P55285 AC022880.1-201ENST00000534017 973 ntBASIC1.6□□□□□ -2.15
CDH6P55285 AC137800.2-201ENST00000574375 120 ntBASIC1.6□□□□□ -2.15
CDH6P55285 AC090616.2-202ENST00000584248 222 ntBASIC1.6□□□□□ -2.15
CDH6P55285 AC091304.9-201ENST00000612091 226 ntBASIC1.6□□□□□ -2.15
CDH6P55285 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CDH6P55285 MTND5P25-201ENST00000430499 799 ntBASIC1.59□□□□□ -2.15
CDH6P55285 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH6P55285 AL591043.1-201ENST00000432461 424 ntBASIC1.59□□□□□ -2.15
CDH6P55285 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.59□□□□□ -2.15
CDH6P55285 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH6P55285 MTND1P30-201ENST00000441241 901 ntBASIC1.59□□□□□ -2.15
CDH6P55285 AMD1P1-201ENST00000457220 922 ntBASIC1.59□□□□□ -2.15
CDH6P55285 snoU13.23-201ENST00000458863 104 ntBASIC1.59□□□□□ -2.15
CDH6P55285 SNORD13-201ENST00000459299 104 ntBASIC1.59□□□□□ -2.15
CDH6P55285 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH6P55285 AC023790.1-201ENST00000482174 347 ntBASIC1.59□□□□□ -2.15
CDH6P55285 AC116562.3-201ENST00000506136 177 ntBASIC1.59□□□□□ -2.15
CDH6P55285 MTND3P25-201ENST00000509243 135 ntBASIC1.59□□□□□ -2.15
CDH6P55285 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH6P55285 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.59□□□□□ -2.15
CDH6P55285 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.59□□□□□ -2.15
CDH6P55285 RNU6-759P-201ENST00000516740 103 ntBASIC1.59□□□□□ -2.15
CDH6P55285 SNORA44.1-201ENST00000517031 108 ntBASIC1.59□□□□□ -2.15
CDH6P55285 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.59□□□□□ -2.15
CDH6P55285 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms