Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
HMGCS2P54868 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
HMGCS2P54868 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.24□□□□□ -2.05
HMGCS2P54868 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HMGCS2P54868 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HMGCS2P54868 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HMGCS2P54868 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HMGCS2P54868 Y_RNA.238-201ENST00000364441 102 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 RNU6-1072P-201ENST00000384703 107 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 RNU6-443P-201ENST00000384780 107 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 SNORA16.2-201ENST00000390991 127 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 RNU2-3P-201ENST00000410144 191 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 Y_RNA.619-201ENST00000410951 90 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.24□□□□□ -2.05
HMGCS2P54868 USP9YP6-201ENST00000413550 854 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 AL353621.1-201ENST00000418219 243 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.24□□□□□ -2.05
HMGCS2P54868 AC007560.1-201ENST00000426912 237 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 AC108667.1-201ENST00000428618 249 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGCS2P54868 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.24□□□□□ -2.05
HMGCS2P54868 AL078601.1-201ENST00000444542 271 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGCS2P54868 NDUFB1P2-201ENST00000449477 176 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 AL121769.1-201ENST00000469473 401 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 AC090096.1-201ENST00000489168 390 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 AC104564.1-201ENST00000493028 407 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 AC026801.1-201ENST00000497178 464 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.24□□□□□ -2.05
HMGCS2P54868 AC104136.1-201ENST00000512969 394 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 RNA5SP401-201ENST00000515920 127 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 RNU6-1178P-201ENST00000516674 107 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 RNU1-104P-201ENST00000517280 175 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 BTF3P12-201ENST00000519620 469 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGCS2P54868 NACAP3-201ENST00000552100 481 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 ZNF519P2-201ENST00000557032 169 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 MTCO3P23-201ENST00000561363 289 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.24□□□□□ -2.05
HMGCS2P54868 AC023824.2-201ENST00000566185 400 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 AC005261.5-201ENST00000596280 355 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 U4.5-201ENST00000617137 123 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 MIR6134-201ENST00000617606 109 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.24□□□□□ -2.05
HMGCS2P54868 MIR1321-201ENST00000637766 79 ntBASIC2.24□□□□□ -2.05
HMGCS2P54868 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HMGCS2P54868 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.23□□□□□ -2.05
HMGCS2P54868 MTND4P5-201ENST00000435821 1374 ntBASIC2.23□□□□□ -2.05
HMGCS2P54868 MTND4P27-201ENST00000450813 1354 ntBASIC2.23□□□□□ -2.05
HMGCS2P54868 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HMGCS2P54868 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
HMGCS2P54868 MIR412-201ENST00000362142 91 ntBASIC2.23□□□□□ -2.05
HMGCS2P54868 Y_RNA.38-201ENST00000362617 102 ntBASIC2.23□□□□□ -2.05
HMGCS2P54868 SNORD14B-201ENST00000364533 90 ntBASIC2.23□□□□□ -2.05
HMGCS2P54868 RNU4-20P-201ENST00000365601 151 ntBASIC2.23□□□□□ -2.05
HMGCS2P54868 RNU6-45P-201ENST00000384471 107 ntBASIC2.23□□□□□ -2.05
HMGCS2P54868 RNU6-1179P-201ENST00000384667 107 ntBASIC2.23□□□□□ -2.05
HMGCS2P54868 SNORD70.1-201ENST00000391007 85 ntBASIC2.23□□□□□ -2.05
HMGCS2P54868 RNU2-20P-201ENST00000410425 191 ntBASIC2.23□□□□□ -2.05
HMGCS2P54868 Y_RNA.623-201ENST00000411128 95 ntBASIC2.23□□□□□ -2.05
HMGCS2P54868 CYCSP33-201ENST00000414485 327 ntBASIC2.23□□□□□ -2.05
HMGCS2P54868 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.23□□□□□ -2.05
HMGCS2P54868 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.23□□□□□ -2.05
HMGCS2P54868 SNRPFP3-201ENST00000457792 225 ntBASIC2.23□□□□□ -2.05
HMGCS2P54868 SCARNA18-201ENST00000459004 134 ntBASIC2.23□□□□□ -2.05
HMGCS2P54868 AC011005.2-201ENST00000487324 359 ntBASIC2.23□□□□□ -2.05
HMGCS2P54868 GZMAP1-201ENST00000503054 631 ntBASIC2.23□□□□□ -2.05
HMGCS2P54868 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.23□□□□□ -2.05
HMGCS2P54868 RNU2-69P-201ENST00000516061 100 ntBASIC2.23□□□□□ -2.05
HMGCS2P54868 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.23□□□□□ -2.05
HMGCS2P54868 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.23□□□□□ -2.05
HMGCS2P54868 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.23□□□□□ -2.05
HMGCS2P54868 AL137161.1-201ENST00000532231 390 ntBASIC2.23□□□□□ -2.05
HMGCS2P54868 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.23□□□□□ -2.05
HMGCS2P54868 AC006199.1-201ENST00000548728 219 ntBASIC2.23□□□□□ -2.05
HMGCS2P54868 AL157687.1-201ENST00000554853 619 ntBASIC2.23□□□□□ -2.05
HMGCS2P54868 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.23□□□□□ -2.05
HMGCS2P54868 MIR4658-201ENST00000584344 65 ntBASIC2.23□□□□□ -2.05
HMGCS2P54868 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HMGCS2P54868 ZNF271P-202ENST00000465539 1970 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 Y_RNA.4-201ENST00000362333 112 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 RNY4P14-201ENST00000363656 96 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 Y_RNA.164-201ENST00000363709 102 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 SNORA67.1-201ENST00000364749 141 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 RNU6-1303P-201ENST00000364841 107 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HMGCS2P54868 RNU6-38P-201ENST00000384085 107 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 Y_RNA.450-201ENST00000384198 113 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 CIR1P3-201ENST00000405137 479 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 RNU6-1068P-201ENST00000410958 103 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 RNU6-607P-201ENST00000411283 108 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 ZNF885P-201ENST00000420174 1098 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 USP9YP18-201ENST00000425912 695 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.22□□□□□ -2.05
HMGCS2P54868 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.22□□□□□ -2.05
HMGCS2P54868 RNU6-333P-201ENST00000459117 107 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.22□□□□□ -2.05
HMGCS2P54868 RNU6-1281P-201ENST00000516223 105 ntBASIC2.22□□□□□ -2.05
HMGCS2P54868 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.22□□□□□ -2.05
HMGCS2P54868 GNAI2P1-201ENST00000541815 315 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms