Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 AC008885.1-201ENST00000514930 301 ntBASIC2.96□□□□□ -1.94
PMS2P54278 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.96□□□□□ -1.94
PMS2P54278 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.96□□□□□ -1.94
PMS2P54278 AP005597.4-201ENST00000526762 229 ntBASIC2.96□□□□□ -1.94
PMS2P54278 APOOP3-201ENST00000536787 586 ntBASIC2.96□□□□□ -1.94
PMS2P54278 ELOCP31-201ENST00000540463 467 ntBASIC2.96□□□□□ -1.94
PMS2P54278 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.96□□□□□ -1.94
PMS2P54278 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.96□□□□□ -1.94
PMS2P54278 AC006023.1-201ENST00000603944 259 ntBASIC2.96□□□□□ -1.94
PMS2P54278 AC064836.2-201ENST00000609491 462 ntBASIC2.96□□□□□ -1.94
PMS2P54278 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PMS2P54278 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.96□□□□□ -1.94
PMS2P54278 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.96□□□□□ -1.94
PMS2P54278 SNORD56.5-201ENST00000364281 72 ntBASIC2.95□□□□□ -1.94
PMS2P54278 SNORD14B-201ENST00000364533 90 ntBASIC2.95□□□□□ -1.94
PMS2P54278 SNORD42.2-201ENST00000365570 69 ntBASIC2.95□□□□□ -1.94
PMS2P54278 RNU6-1329P-201ENST00000365664 107 ntBASIC2.95□□□□□ -1.94
PMS2P54278 RNU6-43P-201ENST00000384302 107 ntBASIC2.95□□□□□ -1.94
PMS2P54278 RNU6-166P-201ENST00000384371 107 ntBASIC2.95□□□□□ -1.94
PMS2P54278 RNY4P36-201ENST00000391116 96 ntBASIC2.95□□□□□ -1.94
PMS2P54278 Y_RNA.623-201ENST00000411128 95 ntBASIC2.95□□□□□ -1.94
PMS2P54278 AC023141.4-201ENST00000412031 328 ntBASIC2.95□□□□□ -1.94
PMS2P54278 AC096649.2-201ENST00000416186 393 ntBASIC2.95□□□□□ -1.94
PMS2P54278 AL096701.2-201ENST00000416920 238 ntBASIC2.95□□□□□ -1.94
PMS2P54278 AL358075.3-201ENST00000426289 226 ntBASIC2.95□□□□□ -1.94
PMS2P54278 AC007560.1-201ENST00000426912 237 ntBASIC2.95□□□□□ -1.94
PMS2P54278 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.95□□□□□ -1.94
PMS2P54278 AL078601.1-201ENST00000444542 271 ntBASIC2.95□□□□□ -1.94
PMS2P54278 HMGN2P10-201ENST00000448085 265 ntBASIC2.95□□□□□ -1.94
PMS2P54278 Y_RNA.639-201ENST00000458981 102 ntBASIC2.95□□□□□ -1.94
PMS2P54278 AC008571.1-201ENST00000467232 300 ntBASIC2.95□□□□□ -1.94
PMS2P54278 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.95□□□□□ -1.94
PMS2P54278 RNU6-826P-201ENST00000516827 104 ntBASIC2.95□□□□□ -1.94
PMS2P54278 RNU6-1183P-201ENST00000517054 60 ntBASIC2.95□□□□□ -1.94
PMS2P54278 SNORA31.19-201ENST00000517079 126 ntBASIC2.95□□□□□ -1.94
PMS2P54278 MIR4672-201ENST00000583126 81 ntBASIC2.95□□□□□ -1.94
PMS2P54278 MIR5690-201ENST00000583739 73 ntBASIC2.95□□□□□ -1.94
PMS2P54278 AC008739.2-201ENST00000597006 317 ntBASIC2.95□□□□□ -1.94
PMS2P54278 AL645944.1-201ENST00000603857 493 ntBASIC2.95□□□□□ -1.94
PMS2P54278 AP000787.2-201ENST00000604432 568 ntBASIC2.95□□□□□ -1.94
PMS2P54278 AC019159.1-201ENST00000605094 187 ntBASIC2.95□□□□□ -1.94
PMS2P54278 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.95□□□□□ -1.94
PMS2P54278 UCA1.1-201ENST00000620952 75 ntBASIC2.95□□□□□ -1.94
PMS2P54278 AC002064.3-201ENST00000623448 346 ntBASIC2.95□□□□□ -1.94
PMS2P54278 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PMS2P54278 ADAM3A-203ENST00000461344 2157 ntBASIC2.95□□□□□ -1.94
PMS2P54278 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.95□□□□□ -1.94
PMS2P54278 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.95□□□□□ -1.94
PMS2P54278 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PMS2P54278 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PMS2P54278 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
PMS2P54278 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PMS2P54278 AC138393.1-203ENST00000327086 343 ntBASIC2.94□□□□□ -1.94
PMS2P54278 SNORD3E-201ENST00000362899 217 ntBASIC2.94□□□□□ -1.94
PMS2P54278 RNU6-1188P-201ENST00000363795 107 ntBASIC2.94□□□□□ -1.94
PMS2P54278 AC009414.1-201ENST00000427200 443 ntBASIC2.94□□□□□ -1.94
PMS2P54278 Z96811.1-201ENST00000445880 108 ntBASIC2.94□□□□□ -1.94
PMS2P54278 AC130509.1-201ENST00000464158 433 ntBASIC2.94□□□□□ -1.94
PMS2P54278 AIG1P1-201ENST00000503376 148 ntBASIC2.94□□□□□ -1.94
PMS2P54278 AC116337.1-201ENST00000509680 687 ntBASIC2.94□□□□□ -1.94
PMS2P54278 AC096745.1-201ENST00000509945 370 ntBASIC2.94□□□□□ -1.94
PMS2P54278 SNORA9.3-201ENST00000516383 129 ntBASIC2.94□□□□□ -1.94
PMS2P54278 RN7SKP272-201ENST00000516988 232 ntBASIC2.94□□□□□ -1.94
PMS2P54278 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.94□□□□□ -1.94
PMS2P54278 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.94□□□□□ -1.94
PMS2P54278 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.94□□□□□ -1.94
PMS2P54278 AC025423.5-201ENST00000550230 219 ntBASIC2.94□□□□□ -1.94
PMS2P54278 AC021739.1-201ENST00000559631 174 ntBASIC2.94□□□□□ -1.94
PMS2P54278 AC093249.1-201ENST00000567049 203 ntBASIC2.94□□□□□ -1.94
PMS2P54278 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.94□□□□□ -1.94
PMS2P54278 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PMS2P54278 AC010620.2-201ENST00000600135 313 ntBASIC2.94□□□□□ -1.94
PMS2P54278 RPL12P50-201ENST00000603116 116 ntBASIC2.94□□□□□ -1.94
PMS2P54278 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.94□□□□□ -1.94
PMS2P54278 AC124303.1-201ENST00000605703 360 ntBASIC2.94□□□□□ -1.94
PMS2P54278 RNU6-85P-201ENST00000605989 107 ntBASIC2.94□□□□□ -1.94
PMS2P54278 AC010378.1-201ENST00000619270 362 ntBASIC2.94□□□□□ -1.94
PMS2P54278 Z69720.2-201ENST00000624755 279 ntBASIC2.94□□□□□ -1.94
PMS2P54278 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.94□□□□□ -1.94
PMS2P54278 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PMS2P54278 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.93□□□□□ -1.94
PMS2P54278 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.93□□□□□ -1.94
PMS2P54278 AC000403.1-201ENST00000613696 3585 ntBASIC2.93□□□□□ -1.94
PMS2P54278 AC004944.1-201ENST00000517807 3059 ntBASIC2.93□□□□□ -1.94
PMS2P54278 SNORD62.1-201ENST00000362541 86 ntBASIC2.93□□□□□ -1.94
PMS2P54278 Y_RNA.187-201ENST00000363918 113 ntBASIC2.93□□□□□ -1.94
PMS2P54278 SNORD21-201ENST00000383953 95 ntBASIC2.93□□□□□ -1.94
PMS2P54278 SNORA54-201ENST00000384281 123 ntBASIC2.93□□□□□ -1.94
PMS2P54278 RNU6-750P-201ENST00000390946 107 ntBASIC2.93□□□□□ -1.94
PMS2P54278 RN7SKP220-201ENST00000410611 288 ntBASIC2.93□□□□□ -1.94
PMS2P54278 RNU2-49P-201ENST00000410666 184 ntBASIC2.93□□□□□ -1.94
PMS2P54278 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.93□□□□□ -1.94
PMS2P54278 AL590632.1-201ENST00000424289 371 ntBASIC2.93□□□□□ -1.94
PMS2P54278 MTCO2P12-201ENST00000427426 682 ntBASIC2.93□□□□□ -1.94
PMS2P54278 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.93□□□□□ -1.94
PMS2P54278 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.93□□□□□ -1.94
PMS2P54278 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.93□□□□□ -1.94
PMS2P54278 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.93□□□□□ -1.94
PMS2P54278 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.93□□□□□ -1.94
PMS2P54278 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 202.3 ms