Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.7□□□□□ -2.14
ACLYP53396 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.7□□□□□ -2.14
ACLYP53396 AC022616.8-201ENST00000533569 253 ntBASIC1.7□□□□□ -2.14
ACLYP53396 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.7□□□□□ -2.14
ACLYP53396 SNORA4-201ENST00000584302 138 ntBASIC1.7□□□□□ -2.14
ACLYP53396 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.7□□□□□ -2.14
ACLYP53396 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.7□□□□□ -2.14
ACLYP53396 AC004908.3-201ENST00000610248 625 ntBASIC1.7□□□□□ -2.14
ACLYP53396 AL132822.1-201ENST00000617063 513 ntBASIC1.7□□□□□ -2.14
ACLYP53396 AC009878.1-201ENST00000621819 340 ntBASIC1.7□□□□□ -2.14
ACLYP53396 RNU5F-7P-201ENST00000363696 115 ntBASIC1.69□□□□□ -2.14
ACLYP53396 RNU6-944P-201ENST00000364023 107 ntBASIC1.69□□□□□ -2.14
ACLYP53396 SNORD14D-201ENST00000384390 87 ntBASIC1.69□□□□□ -2.14
ACLYP53396 EEF1A1P40-201ENST00000412883 573 ntBASIC1.69□□□□□ -2.14
ACLYP53396 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.69□□□□□ -2.14
ACLYP53396 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.69□□□□□ -2.14
ACLYP53396 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.69□□□□□ -2.14
ACLYP53396 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.69□□□□□ -2.14
ACLYP53396 PGBD4P6-201ENST00000421501 610 ntBASIC1.69□□□□□ -2.14
ACLYP53396 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.69□□□□□ -2.14
ACLYP53396 USP9YP18-201ENST00000425912 695 ntBASIC1.69□□□□□ -2.14
ACLYP53396 AL136380.1-201ENST00000447970 162 ntBASIC1.69□□□□□ -2.14
ACLYP53396 RNU1-123P-201ENST00000458950 160 ntBASIC1.69□□□□□ -2.14
ACLYP53396 TPT1P8-201ENST00000510120 555 ntBASIC1.69□□□□□ -2.14
ACLYP53396 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.69□□□□□ -2.14
ACLYP53396 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.69□□□□□ -2.14
ACLYP53396 DUXAP5-201ENST00000529668 529 ntBASIC1.69□□□□□ -2.14
ACLYP53396 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.69□□□□□ -2.14
ACLYP53396 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.69□□□□□ -2.14
ACLYP53396 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.69□□□□□ -2.14
ACLYP53396 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.69□□□□□ -2.14
ACLYP53396 AC098848.2-201ENST00000588023 330 ntBASIC1.69□□□□□ -2.14
ACLYP53396 HMGN1P30-201ENST00000589286 268 ntBASIC1.69□□□□□ -2.14
ACLYP53396 AC012065.4-201ENST00000602445 679 ntBASIC1.69□□□□□ -2.14
ACLYP53396 AC112191.3-201ENST00000604371 277 ntBASIC1.69□□□□□ -2.14
ACLYP53396 AL451064.1-201ENST00000607718 471 ntBASIC1.69□□□□□ -2.14
ACLYP53396 AC027807.2-201ENST00000616099 408 ntBASIC1.69□□□□□ -2.14
ACLYP53396 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.69□□□□□ -2.14
ACLYP53396 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
ACLYP53396 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
ACLYP53396 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
ACLYP53396 Y_RNA.22-201ENST00000362492 102 ntBASIC1.68□□□□□ -2.14
ACLYP53396 RNU5E-5P-201ENST00000365379 116 ntBASIC1.68□□□□□ -2.14
ACLYP53396 MIR29B2-201ENST00000385055 81 ntBASIC1.68□□□□□ -2.14
ACLYP53396 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.68□□□□□ -2.14
ACLYP53396 USP9YP12-201ENST00000450481 570 ntBASIC1.68□□□□□ -2.14
ACLYP53396 RBBP4P6-201ENST00000508098 202 ntBASIC1.68□□□□□ -2.14
ACLYP53396 RNU1-86P-201ENST00000516108 154 ntBASIC1.68□□□□□ -2.14
ACLYP53396 RNU1-107P-201ENST00000516617 154 ntBASIC1.68□□□□□ -2.14
ACLYP53396 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.68□□□□□ -2.14
ACLYP53396 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.68□□□□□ -2.14
ACLYP53396 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
ACLYP53396 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
ACLYP53396 AC018630.3-201ENST00000542637 96 ntBASIC1.68□□□□□ -2.14
ACLYP53396 BNIP3P6-201ENST00000549284 499 ntBASIC1.68□□□□□ -2.14
ACLYP53396 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.68□□□□□ -2.14
ACLYP53396 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.68□□□□□ -2.14
ACLYP53396 AC008521.1-201ENST00000587471 187 ntBASIC1.68□□□□□ -2.14
ACLYP53396 AC026585.1-201ENST00000619582 524 ntBASIC1.68□□□□□ -2.14
ACLYP53396 AC019226.2-201ENST00000625973 424 ntBASIC1.68□□□□□ -2.14
ACLYP53396 AC099654.13-201ENST00000639774 207 ntBASIC1.68□□□□□ -2.14
ACLYP53396 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
ACLYP53396 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
ACLYP53396 MTND5P35-201ENST00000557537 1720 ntBASIC1.67□□□□□ -2.14
ACLYP53396 SNORD56.1-201ENST00000362913 68 ntBASIC1.67□□□□□ -2.14
ACLYP53396 RNU6-61P-201ENST00000365528 109 ntBASIC1.67□□□□□ -2.14
ACLYP53396 RPL23AP32-201ENST00000395315 459 ntBASIC1.67□□□□□ -2.14
ACLYP53396 RAP1BP3-201ENST00000407180 549 ntBASIC1.67□□□□□ -2.14
ACLYP53396 RNA5SP111-201ENST00000411386 101 ntBASIC1.67□□□□□ -2.14
ACLYP53396 MTCYBP5-201ENST00000423752 1135 ntBASIC1.67□□□□□ -2.14
ACLYP53396 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.67□□□□□ -2.14
ACLYP53396 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.67□□□□□ -2.14
ACLYP53396 ZNF114P1-201ENST00000453500 292 ntBASIC1.67□□□□□ -2.14
ACLYP53396 AL353752.1-201ENST00000454946 260 ntBASIC1.67□□□□□ -2.14
ACLYP53396 PTP4A1P4-201ENST00000512479 322 ntBASIC1.67□□□□□ -2.14
ACLYP53396 Y_RNA.672-201ENST00000516289 104 ntBASIC1.67□□□□□ -2.14
ACLYP53396 RNA5SP102-201ENST00000516865 106 ntBASIC1.67□□□□□ -2.14
ACLYP53396 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.67□□□□□ -2.14
ACLYP53396 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.67□□□□□ -2.14
ACLYP53396 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.67□□□□□ -2.14
ACLYP53396 BNIP3P25-201ENST00000596023 559 ntBASIC1.67□□□□□ -2.14
ACLYP53396 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.67□□□□□ -2.14
ACLYP53396 AC007792.1-201ENST00000623023 402 ntBASIC1.67□□□□□ -2.14
ACLYP53396 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
ACLYP53396 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
ACLYP53396 AL354685.2-201ENST00000448218 1447 ntBASIC1.66□□□□□ -2.14
ACLYP53396 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.66□□□□□ -2.14
ACLYP53396 Y_RNA.191-201ENST00000363972 113 ntBASIC1.66□□□□□ -2.14
ACLYP53396 RNA5SP212-201ENST00000391223 107 ntBASIC1.66□□□□□ -2.14
ACLYP53396 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.66□□□□□ -2.14
ACLYP53396 OR9R1P-201ENST00000412200 877 ntBASIC1.66□□□□□ -2.14
ACLYP53396 SRIP3-201ENST00000413200 219 ntBASIC1.66□□□□□ -2.14
ACLYP53396 AL356583.2-201ENST00000426536 280 ntBASIC1.66□□□□□ -2.14
ACLYP53396 AL354695.1-201ENST00000427935 228 ntBASIC1.66□□□□□ -2.14
ACLYP53396 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.66□□□□□ -2.14
ACLYP53396 EPS15P1-201ENST00000448836 336 ntBASIC1.66□□□□□ -2.14
ACLYP53396 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.66□□□□□ -2.14
ACLYP53396 HMGB3P17-201ENST00000504195 649 ntBASIC1.66□□□□□ -2.14
ACLYP53396 MTCO3P9-201ENST00000506989 781 ntBASIC1.66□□□□□ -2.14
ACLYP53396 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 149.6 ms