Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 MIR181A2-201ENST00000384863 110 ntBASIC2.72□□□□□ -1.97
CLCNKAP51800 AL445529.1-201ENST00000398713 389 ntBASIC2.72□□□□□ -1.97
CLCNKAP51800 MIR548K-201ENST00000408406 116 ntBASIC2.72□□□□□ -1.97
CLCNKAP51800 SNORD88.1-201ENST00000408684 91 ntBASIC2.72□□□□□ -1.97
CLCNKAP51800 AL451074.5-201ENST00000415894 435 ntBASIC2.72□□□□□ -1.97
CLCNKAP51800 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.72□□□□□ -1.97
CLCNKAP51800 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.72□□□□□ -1.97
CLCNKAP51800 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.72□□□□□ -1.97
CLCNKAP51800 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.72□□□□□ -1.97
CLCNKAP51800 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.72□□□□□ -1.97
CLCNKAP51800 MTND3P22-201ENST00000510932 243 ntBASIC2.72□□□□□ -1.97
CLCNKAP51800 AC093027.1-201ENST00000546698 429 ntBASIC2.72□□□□□ -1.97
CLCNKAP51800 AC079600.2-201ENST00000550076 130 ntBASIC2.72□□□□□ -1.97
CLCNKAP51800 AC026371.1-201ENST00000551867 419 ntBASIC2.72□□□□□ -1.97
CLCNKAP51800 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.72□□□□□ -1.97
CLCNKAP51800 AC025281.1-201ENST00000567026 265 ntBASIC2.72□□□□□ -1.97
CLCNKAP51800 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.72□□□□□ -1.97
CLCNKAP51800 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.72□□□□□ -1.97
CLCNKAP51800 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.72□□□□□ -1.97
CLCNKAP51800 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.72□□□□□ -1.97
CLCNKAP51800 AL355877.2-201ENST00000603670 358 ntBASIC2.72□□□□□ -1.97
CLCNKAP51800 AL359198.2-201ENST00000611836 194 ntBASIC2.72□□□□□ -1.97
CLCNKAP51800 SCARNA4-202ENST00000625402 129 ntBASIC2.72□□□□□ -1.97
CLCNKAP51800 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLCNKAP51800 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.97
CLCNKAP51800 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.71□□□□□ -1.98
CLCNKAP51800 RNU6-78P-201ENST00000362897 107 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 RNU6-797P-201ENST00000363101 109 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 RNU4-73P-201ENST00000363164 141 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 RNU6-1280P-201ENST00000365211 107 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 RNU5E-7P-201ENST00000365290 117 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 Y_RNA.339-201ENST00000365325 102 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 RNU6-827P-201ENST00000365553 106 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 Y_RNA.474-201ENST00000384341 102 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 AL590004.2-201ENST00000404787 371 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 RNA5SP184-201ENST00000411071 108 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 AC063976.3-201ENST00000426849 329 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 MTND3P23-201ENST00000431980 347 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.71□□□□□ -1.98
CLCNKAP51800 HIGD1AP2-201ENST00000446367 280 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 MTND1P17-201ENST00000448961 204 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 AC130509.1-201ENST00000464158 433 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 AC026801.1-201ENST00000497178 464 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 MTND5P5-201ENST00000503764 376 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.71□□□□□ -1.98
CLCNKAP51800 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.71□□□□□ -1.98
CLCNKAP51800 RNU6-277P-201ENST00000516272 106 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 AC022634.1-201ENST00000520765 532 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.71□□□□□ -1.98
CLCNKAP51800 AP004607.1-201ENST00000524456 203 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 MIR3162-201ENST00000581818 82 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 C8orf59P2-201ENST00000603441 271 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.71□□□□□ -1.98
CLCNKAP51800 AC009233.1-201ENST00000616477 371 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 MIR3199-2-201ENST00000636243 86 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 MIR1302-1-201ENST00000637932 143 ntBASIC2.71□□□□□ -1.98
CLCNKAP51800 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLCNKAP51800 AC135776.4-201ENST00000624300 1904 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLCNKAP51800 RNU6-428P-201ENST00000362942 107 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 RNU6-942P-201ENST00000363002 107 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 RNU1-112P-201ENST00000364401 164 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLCNKAP51800 MT-TD-201ENST00000387419 68 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 FTH1P15-201ENST00000406984 280 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 RNU4-14P-201ENST00000410858 122 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 AL117339.3-201ENST00000418733 162 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.7□□□□□ -1.98
CLCNKAP51800 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.7□□□□□ -1.98
CLCNKAP51800 RPS3AP52-201ENST00000435639 297 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CLCNKAP51800 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.7□□□□□ -1.98
CLCNKAP51800 RNU7-187P-201ENST00000458985 68 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 AC003982.1-202ENST00000469928 248 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 RPL23AP70-201ENST00000483361 460 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.7□□□□□ -1.98
CLCNKAP51800 AC116655.1-201ENST00000508324 901 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 AC096745.1-201ENST00000509945 370 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 RPL39P5-202ENST00000512505 151 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.7□□□□□ -1.98
CLCNKAP51800 COX6CP5-201ENST00000527162 228 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.7□□□□□ -1.98
CLCNKAP51800 AC103996.1-201ENST00000555468 102 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.7□□□□□ -1.98
CLCNKAP51800 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.7□□□□□ -1.98
CLCNKAP51800 AC100830.2-201ENST00000581636 240 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 MIR3605-201ENST00000583214 100 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 MIR3616-201ENST00000584070 92 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 AC023043.3-201ENST00000593113 385 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 AL359697.1-201ENST00000624879 587 ntBASIC2.7□□□□□ -1.98
CLCNKAP51800 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
CLCNKAP51800 AL161431.1-201ENST00000618966 4205 ntBASIC2.69□□□□□ -1.98
CLCNKAP51800 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.69□□□□□ -1.98
CLCNKAP51800 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLCNKAP51800 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLCNKAP51800 AC062016.1-201ENST00000355719 319 ntBASIC2.69□□□□□ -1.98
CLCNKAP51800 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLCNKAP51800 HMGN2P35-201ENST00000412164 270 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms