Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.27□□□□□ -1.73
USP11P51784 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.27□□□□□ -1.73
USP11P51784 AC090132.2-201ENST00000615881 347 ntBASIC4.27□□□□□ -1.73
USP11P51784 MAPK10-373ENST00000641983 6772 ntBASIC4.27□□□□□ -1.73
USP11P51784 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP11P51784 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USP11P51784 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP11P51784 AC009541.1-201ENST00000438279 2662 ntBASIC4.27□□□□□ -1.73
USP11P51784 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USP11P51784 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP11P51784 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.26□□□□□ -1.73
USP11P51784 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.26□□□□□ -1.73
USP11P51784 USP8P1-201ENST00000494673 3183 ntBASIC4.26□□□□□ -1.73
USP11P51784 UBE2WP1-201ENST00000362030 340 ntBASIC4.26□□□□□ -1.73
USP11P51784 RNU6-105P-201ENST00000363909 104 ntBASIC4.26□□□□□ -1.73
USP11P51784 RNU6-1117P-201ENST00000384525 104 ntBASIC4.26□□□□□ -1.73
USP11P51784 MIR32-201ENST00000384965 70 ntBASIC4.26□□□□□ -1.73
USP11P51784 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
USP11P51784 RNU1-139P-201ENST00000391307 165 ntBASIC4.26□□□□□ -1.73
USP11P51784 RNU5A-5P-201ENST00000411054 116 ntBASIC4.26□□□□□ -1.73
USP11P51784 TOMM22P1-201ENST00000418578 312 ntBASIC4.26□□□□□ -1.73
USP11P51784 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.26□□□□□ -1.73
USP11P51784 AL078601.1-201ENST00000444542 271 ntBASIC4.26□□□□□ -1.73
USP11P51784 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.26□□□□□ -1.73
USP11P51784 SNORD2.1-201ENST00000458762 69 ntBASIC4.26□□□□□ -1.73
USP11P51784 AC087477.1-201ENST00000465747 340 ntBASIC4.26□□□□□ -1.73
USP11P51784 TRBV12-2-201ENST00000489763 344 ntBASIC4.26□□□□□ -1.73
USP11P51784 AF186996.7-201ENST00000492781 209 ntBASIC4.26□□□□□ -1.73
USP11P51784 RNA5SP143-201ENST00000516936 115 ntBASIC4.26□□□□□ -1.73
USP11P51784 RMST_6.1-201ENST00000611980 203 ntBASIC4.26□□□□□ -1.73
USP11P51784 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.26□□□□□ -1.73
USP11P51784 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP11P51784 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
USP11P51784 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP11P51784 AL079305.1-201ENST00000623159 3008 ntBASIC4.26□□□□□ -1.73
USP11P51784 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP11P51784 SNORA25.1-201ENST00000362326 128 ntBASIC4.25□□□□□ -1.73
USP11P51784 SNORD115-32-201ENST00000364079 82 ntBASIC4.25□□□□□ -1.73
USP11P51784 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
USP11P51784 RNU6-968P-201ENST00000384076 107 ntBASIC4.25□□□□□ -1.73
USP11P51784 RNU6-72P-201ENST00000384285 79 ntBASIC4.25□□□□□ -1.73
USP11P51784 RNU6-1289P-201ENST00000384431 106 ntBASIC4.25□□□□□ -1.73
USP11P51784 MIR23A-201ENST00000385245 73 ntBASIC4.25□□□□□ -1.73
USP11P51784 MIR670-201ENST00000390142 98 ntBASIC4.25□□□□□ -1.73
USP11P51784 RNA5SP171-201ENST00000391071 115 ntBASIC4.25□□□□□ -1.73
USP11P51784 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP11P51784 Z98941.1-201ENST00000407764 100 ntBASIC4.25□□□□□ -1.73
USP11P51784 MTCO1P5-201ENST00000433573 344 ntBASIC4.25□□□□□ -1.73
USP11P51784 RNU7-170P-201ENST00000459303 61 ntBASIC4.25□□□□□ -1.73
USP11P51784 UBE2CP3-201ENST00000502715 450 ntBASIC4.25□□□□□ -1.73
USP11P51784 RNA5SP208-201ENST00000516156 78 ntBASIC4.25□□□□□ -1.73
USP11P51784 Vault.1-201ENST00000516474 102 ntBASIC4.25□□□□□ -1.73
USP11P51784 SNORA27.4-201ENST00000516650 95 ntBASIC4.25□□□□□ -1.73
USP11P51784 RNU7-110P-201ENST00000516891 62 ntBASIC4.25□□□□□ -1.73
USP11P51784 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.25□□□□□ -1.73
USP11P51784 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.25□□□□□ -1.73
USP11P51784 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.25□□□□□ -1.73
USP11P51784 AC108706.1-201ENST00000611053 297 ntBASIC4.25□□□□□ -1.73
USP11P51784 AC012531.5-201ENST00000611375 151 ntBASIC4.25□□□□□ -1.73
USP11P51784 AC241585.2-209ENST00000638217 143 ntBASIC4.25□□□□□ -1.73
USP11P51784 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.25□□□□□ -1.73
USP11P51784 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP11P51784 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
USP11P51784 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.25□□□□□ -1.73
USP11P51784 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
USP11P51784 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.25□□□□□ -1.73
USP11P51784 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP11P51784 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP11P51784 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
USP11P51784 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP11P51784 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP11P51784 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
USP11P51784 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
USP11P51784 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
USP11P51784 RNU6-173P-201ENST00000364215 104 ntBASIC4.24□□□□□ -1.73
USP11P51784 Y_RNA.435-201ENST00000384095 112 ntBASIC4.24□□□□□ -1.73
USP11P51784 Y_RNA.441-201ENST00000384123 112 ntBASIC4.24□□□□□ -1.73
USP11P51784 RNU6-1181P-201ENST00000384191 106 ntBASIC4.24□□□□□ -1.73
USP11P51784 RNU6-22P-201ENST00000384355 107 ntBASIC4.24□□□□□ -1.73
USP11P51784 RNU6-1035P-201ENST00000384477 107 ntBASIC4.24□□□□□ -1.73
USP11P51784 RNU6ATAC-201ENST00000408749 126 ntBASIC4.24□□□□□ -1.73
USP11P51784 RNU6-735P-201ENST00000410612 107 ntBASIC4.24□□□□□ -1.73
USP11P51784 RNU2-51P-201ENST00000410708 197 ntBASIC4.24□□□□□ -1.73
USP11P51784 BMS1P22-201ENST00000414726 313 ntBASIC4.24□□□□□ -1.73
USP11P51784 NDUFB4P7-201ENST00000423198 363 ntBASIC4.24□□□□□ -1.73
USP11P51784 AC007919.1-201ENST00000429380 217 ntBASIC4.24□□□□□ -1.73
USP11P51784 AL445584.1-201ENST00000431451 330 ntBASIC4.24□□□□□ -1.73
USP11P51784 AL031659.1-201ENST00000447075 539 ntBASIC4.24□□□□□ -1.73
USP11P51784 HMGN2P21-201ENST00000447764 270 ntBASIC4.24□□□□□ -1.73
USP11P51784 AL353705.4-201ENST00000449661 238 ntBASIC4.24□□□□□ -1.73
USP11P51784 SSXP4-201ENST00000451349 245 ntBASIC4.24□□□□□ -1.73
USP11P51784 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.24□□□□□ -1.73
USP11P51784 RN7SKP209-201ENST00000516888 304 ntBASIC4.24□□□□□ -1.73
USP11P51784 RNA5SP165-201ENST00000517142 115 ntBASIC4.24□□□□□ -1.73
USP11P51784 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.24□□□□□ -1.73
USP11P51784 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.24□□□□□ -1.73
USP11P51784 KLKP1-201ENST00000595979 403 ntBASIC4.24□□□□□ -1.73
USP11P51784 AC008749.1-201ENST00000597650 306 ntBASIC4.24□□□□□ -1.73
USP11P51784 AC037487.3-201ENST00000606668 112 ntBASIC4.24□□□□□ -1.73
USP11P51784 AL391261.4-201ENST00000616012 481 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms