Protein–RNA interactions for Protein: P49918

CDKN1C, Cyclin-dependent kinase inhibitor 1C, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1CP49918 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.37□□□□□ -1.87
CDKN1CP49918 MIR4429-201ENST00000580105 73 ntBASIC3.37□□□□□ -1.87
CDKN1CP49918 MIR4425-201ENST00000580572 84 ntBASIC3.37□□□□□ -1.87
CDKN1CP49918 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.37□□□□□ -1.87
CDKN1CP49918 AL034555.1-201ENST00000604816 211 ntBASIC3.37□□□□□ -1.87
CDKN1CP49918 AL133255.1-201ENST00000606374 441 ntBASIC3.37□□□□□ -1.87
CDKN1CP49918 U3.45-201ENST00000607547 219 ntBASIC3.37□□□□□ -1.87
CDKN1CP49918 AC084781.2-201ENST00000615568 161 ntBASIC3.37□□□□□ -1.87
CDKN1CP49918 HMGB1P24-202ENST00000615653 685 ntBASIC3.37□□□□□ -1.87
CDKN1CP49918 SCARNA4-201ENST00000629045 128 ntBASIC3.37□□□□□ -1.87
CDKN1CP49918 MTND4LP32-201ENST00000636111 270 ntBASIC3.37□□□□□ -1.87
CDKN1CP49918 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
CDKN1CP49918 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.37□□□□□ -1.87
CDKN1CP49918 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDKN1CP49918 AL161912.2-201ENST00000565707 3007 ntBASIC3.36□□□□□ -1.87
CDKN1CP49918 SNORA71.3-201ENST00000362582 128 ntBASIC3.36□□□□□ -1.87
CDKN1CP49918 RNU6-461P-201ENST00000364195 107 ntBASIC3.36□□□□□ -1.87
CDKN1CP49918 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.36□□□□□ -1.87
CDKN1CP49918 AP002088.1-201ENST00000382740 395 ntBASIC3.36□□□□□ -1.87
CDKN1CP49918 SNORD116-29-201ENST00000384516 83 ntBASIC3.36□□□□□ -1.87
CDKN1CP49918 RNU6-310P-201ENST00000384655 107 ntBASIC3.36□□□□□ -1.87
CDKN1CP49918 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.36□□□□□ -1.87
CDKN1CP49918 AL356968.1-201ENST00000416622 474 ntBASIC3.36□□□□□ -1.87
CDKN1CP49918 AL353705.4-201ENST00000449661 238 ntBASIC3.36□□□□□ -1.87
CDKN1CP49918 EEF1B2P7-201ENST00000451177 676 ntBASIC3.36□□□□□ -1.87
CDKN1CP49918 RPS3P1-201ENST00000456781 192 ntBASIC3.36□□□□□ -1.87
CDKN1CP49918 CYP2C59P-201ENST00000457790 269 ntBASIC3.36□□□□□ -1.87
CDKN1CP49918 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.36□□□□□ -1.87
CDKN1CP49918 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.36□□□□□ -1.87
CDKN1CP49918 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.36□□□□□ -1.87
CDKN1CP49918 RNVU1-4-201ENST00000612985 164 ntBASIC3.36□□□□□ -1.87
CDKN1CP49918 AC008121.3-201ENST00000618726 433 ntBASIC3.36□□□□□ -1.87
CDKN1CP49918 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.36□□□□□ -1.87
CDKN1CP49918 SNORA43.4-201ENST00000629559 138 ntBASIC3.36□□□□□ -1.87
CDKN1CP49918 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDKN1CP49918 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDKN1CP49918 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
CDKN1CP49918 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDKN1CP49918 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDKN1CP49918 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDKN1CP49918 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDKN1CP49918 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDKN1CP49918 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
CDKN1CP49918 Y_RNA.58-201ENST00000362807 102 ntBASIC3.35□□□□□ -1.87
CDKN1CP49918 RNU6-1159P-201ENST00000362933 107 ntBASIC3.35□□□□□ -1.87
CDKN1CP49918 Y_RNA.146-201ENST00000363549 102 ntBASIC3.35□□□□□ -1.87
CDKN1CP49918 Y_RNA.154-201ENST00000363624 102 ntBASIC3.35□□□□□ -1.87
CDKN1CP49918 RNU6-595P-201ENST00000363944 107 ntBASIC3.35□□□□□ -1.87
CDKN1CP49918 RNY3P1-201ENST00000365085 102 ntBASIC3.35□□□□□ -1.87
CDKN1CP49918 RNY3-201ENST00000365484 102 ntBASIC3.35□□□□□ -1.87
CDKN1CP49918 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDKN1CP49918 MIR184-201ENST00000384962 84 ntBASIC3.35□□□□□ -1.87
CDKN1CP49918 RNU6-1328P-201ENST00000410938 106 ntBASIC3.35□□□□□ -1.87
CDKN1CP49918 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.35□□□□□ -1.87
CDKN1CP49918 AL353705.1-201ENST00000433468 480 ntBASIC3.35□□□□□ -1.87
CDKN1CP49918 AC090525.1-201ENST00000479116 478 ntBASIC3.35□□□□□ -1.87
CDKN1CP49918 RPL30P10-201ENST00000488148 337 ntBASIC3.35□□□□□ -1.87
CDKN1CP49918 CYP4A27P-201ENST00000567218 190 ntBASIC3.35□□□□□ -1.87
CDKN1CP49918 MIR3923-201ENST00000579521 83 ntBASIC3.35□□□□□ -1.87
CDKN1CP49918 MIR4444-1-201ENST00000581696 74 ntBASIC3.35□□□□□ -1.87
CDKN1CP49918 MIR4444-2-201ENST00000584390 74 ntBASIC3.35□□□□□ -1.87
CDKN1CP49918 RPL30P11-203ENST00000598995 310 ntBASIC3.35□□□□□ -1.87
CDKN1CP49918 AL356280.1-201ENST00000603614 379 ntBASIC3.35□□□□□ -1.87
CDKN1CP49918 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.35□□□□□ -1.87
CDKN1CP49918 MIR5739-201ENST00000619803 80 ntBASIC3.35□□□□□ -1.87
CDKN1CP49918 AL160413.1-201ENST00000622780 310 ntBASIC3.35□□□□□ -1.87
CDKN1CP49918 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.35□□□□□ -1.87
CDKN1CP49918 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDKN1CP49918 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.34□□□□□ -1.87
CDKN1CP49918 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.34□□□□□ -1.87
CDKN1CP49918 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDKN1CP49918 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDKN1CP49918 RNA5SP50-201ENST00000363731 107 ntBASIC3.34□□□□□ -1.87
CDKN1CP49918 SNORD115-32-201ENST00000364079 82 ntBASIC3.34□□□□□ -1.87
CDKN1CP49918 RNA5SP240-201ENST00000365355 128 ntBASIC3.34□□□□□ -1.87
CDKN1CP49918 Y_RNA.404-201ENST00000383978 102 ntBASIC3.34□□□□□ -1.87
CDKN1CP49918 MIR670-201ENST00000390142 98 ntBASIC3.34□□□□□ -1.87
CDKN1CP49918 Y_RNA.646-201ENST00000410980 101 ntBASIC3.34□□□□□ -1.87
CDKN1CP49918 RPS26P42-201ENST00000413485 326 ntBASIC3.34□□□□□ -1.87
CDKN1CP49918 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.34□□□□□ -1.87
CDKN1CP49918 AC243428.1-201ENST00000421099 264 ntBASIC3.34□□□□□ -1.87
CDKN1CP49918 AC008267.5-201ENST00000424928 265 ntBASIC3.34□□□□□ -1.87
CDKN1CP49918 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CDKN1CP49918 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.34□□□□□ -1.87
CDKN1CP49918 FCF1P8-201ENST00000510322 597 ntBASIC3.34□□□□□ -1.87
CDKN1CP49918 AC091874.1-201ENST00000511402 339 ntBASIC3.34□□□□□ -1.87
CDKN1CP49918 SNORA25.11-201ENST00000515935 105 ntBASIC3.34□□□□□ -1.87
CDKN1CP49918 RN7SKP282-201ENST00000516824 299 ntBASIC3.34□□□□□ -1.87
CDKN1CP49918 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.34□□□□□ -1.87
CDKN1CP49918 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.34□□□□□ -1.87
CDKN1CP49918 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDKN1CP49918 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CDKN1CP49918 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
CDKN1CP49918 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.34□□□□□ -1.88
CDKN1CP49918 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.88
CDKN1CP49918 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.34□□□□□ -1.88
CDKN1CP49918 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.34□□□□□ -1.88
CDKN1CP49918 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.33□□□□□ -1.88
CDKN1CP49918 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDKN1CP49918 RNU1-70P-201ENST00000362618 164 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 259.3 ms