Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 MIR15A-201ENST00000607334 83 ntBASIC2.16□□□□□ -2.06
ATRXP46100 AC083806.3-201ENST00000614016 455 ntBASIC2.16□□□□□ -2.06
ATRXP46100 AC011155.2-201ENST00000623202 216 ntBASIC2.16□□□□□ -2.06
ATRXP46100 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
ATRXP46100 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.15□□□□□ -2.06
ATRXP46100 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
ATRXP46100 NACAP2-201ENST00000318548 624 ntBASIC2.15□□□□□ -2.06
ATRXP46100 RNU6-82P-201ENST00000363970 107 ntBASIC2.15□□□□□ -2.06
ATRXP46100 SNORA75B-201ENST00000384053 137 ntBASIC2.15□□□□□ -2.06
ATRXP46100 RNU6-38P-201ENST00000384085 107 ntBASIC2.15□□□□□ -2.06
ATRXP46100 RNU6-474P-201ENST00000384243 107 ntBASIC2.15□□□□□ -2.06
ATRXP46100 MIR559-201ENST00000385188 96 ntBASIC2.15□□□□□ -2.06
ATRXP46100 RNA5SP56-201ENST00000410277 118 ntBASIC2.15□□□□□ -2.06
ATRXP46100 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.15□□□□□ -2.06
ATRXP46100 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.15□□□□□ -2.06
ATRXP46100 AL360271.2-201ENST00000447710 161 ntBASIC2.15□□□□□ -2.06
ATRXP46100 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.15□□□□□ -2.06
ATRXP46100 BTF3P15-201ENST00000455606 336 ntBASIC2.15□□□□□ -2.06
ATRXP46100 RNU1-123P-201ENST00000458950 160 ntBASIC2.15□□□□□ -2.06
ATRXP46100 RNU6-333P-201ENST00000459117 107 ntBASIC2.15□□□□□ -2.06
ATRXP46100 RPS20P20-201ENST00000460498 340 ntBASIC2.15□□□□□ -2.06
ATRXP46100 RN7SL75P-201ENST00000461926 281 ntBASIC2.15□□□□□ -2.06
ATRXP46100 AC087884.1-201ENST00000469738 328 ntBASIC2.15□□□□□ -2.06
ATRXP46100 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.15□□□□□ -2.06
ATRXP46100 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.15□□□□□ -2.06
ATRXP46100 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.15□□□□□ -2.06
ATRXP46100 RNU6-914P-201ENST00000516749 109 ntBASIC2.15□□□□□ -2.06
ATRXP46100 MTCO3P23-201ENST00000561363 289 ntBASIC2.15□□□□□ -2.06
ATRXP46100 MIR3942-201ENST00000585264 109 ntBASIC2.15□□□□□ -2.06
ATRXP46100 BNIP3P25-201ENST00000596023 559 ntBASIC2.15□□□□□ -2.06
ATRXP46100 uc_338.34-201ENST00000617467 174 ntBASIC2.15□□□□□ -2.06
ATRXP46100 MIR219B-201ENST00000637023 88 ntBASIC2.15□□□□□ -2.06
ATRXP46100 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
ATRXP46100 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
ATRXP46100 MIR423-201ENST00000362201 94 ntBASIC2.15□□□□□ -2.07
ATRXP46100 RNU4-44P-201ENST00000363050 141 ntBASIC2.15□□□□□ -2.07
ATRXP46100 Y_RNA.187-201ENST00000363918 113 ntBASIC2.15□□□□□ -2.07
ATRXP46100 Y_RNA.428-201ENST00000384078 102 ntBASIC2.15□□□□□ -2.07
ATRXP46100 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.15□□□□□ -2.07
ATRXP46100 MTND4P19-201ENST00000446659 478 ntBASIC2.15□□□□□ -2.07
ATRXP46100 AL162388.1-201ENST00000450912 352 ntBASIC2.15□□□□□ -2.07
ATRXP46100 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.15□□□□□ -2.07
ATRXP46100 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.15□□□□□ -2.07
ATRXP46100 RNU6-840P-201ENST00000517275 65 ntBASIC2.15□□□□□ -2.07
ATRXP46100 AC087854.1-201ENST00000519706 414 ntBASIC2.15□□□□□ -2.07
ATRXP46100 AC090115.3-201ENST00000553218 849 ntBASIC2.15□□□□□ -2.07
ATRXP46100 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.15□□□□□ -2.07
ATRXP46100 AC005046.1-201ENST00000608515 625 ntBASIC2.15□□□□□ -2.07
ATRXP46100 AC103988.1-201ENST00000566382 2177 ntBASIC2.15□□□□□ -2.07
ATRXP46100 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.14□□□□□ -2.07
ATRXP46100 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ATRXP46100 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.14□□□□□ -2.07
ATRXP46100 MTND5P35-201ENST00000557537 1720 ntBASIC2.14□□□□□ -2.07
ATRXP46100 Y_RNA.324-201ENST00000365165 102 ntBASIC2.14□□□□□ -2.07
ATRXP46100 RNU6-692P-201ENST00000384496 107 ntBASIC2.14□□□□□ -2.07
ATRXP46100 MIR514A1-201ENST00000385133 98 ntBASIC2.14□□□□□ -2.07
ATRXP46100 MIR548K-201ENST00000408406 116 ntBASIC2.14□□□□□ -2.07
ATRXP46100 RNA5SP118-201ENST00000410385 109 ntBASIC2.14□□□□□ -2.07
ATRXP46100 MTND3P8-201ENST00000412909 339 ntBASIC2.14□□□□□ -2.07
ATRXP46100 AC104332.2-201ENST00000429959 156 ntBASIC2.14□□□□□ -2.07
ATRXP46100 VDAC1P3-201ENST00000434069 851 ntBASIC2.14□□□□□ -2.07
ATRXP46100 Z82210.1-201ENST00000440037 231 ntBASIC2.14□□□□□ -2.07
ATRXP46100 NEFMP1-201ENST00000443423 1006 ntBASIC2.14□□□□□ -2.07
ATRXP46100 SNORD5.1-201ENST00000458800 75 ntBASIC2.14□□□□□ -2.07
ATRXP46100 RNU7-63P-201ENST00000459054 62 ntBASIC2.14□□□□□ -2.07
ATRXP46100 AC010631.1-201ENST00000474150 156 ntBASIC2.14□□□□□ -2.07
ATRXP46100 HMGB1P22-201ENST00000505315 124 ntBASIC2.14□□□□□ -2.07
ATRXP46100 ATP5EP1-201ENST00000510257 156 ntBASIC2.14□□□□□ -2.07
ATRXP46100 MIR1273C-201ENST00000578669 77 ntBASIC2.14□□□□□ -2.07
ATRXP46100 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
ATRXP46100 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ATRXP46100 AC090229.1-201ENST00000590983 1609 ntBASIC2.14□□□□□ -2.07
ATRXP46100 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.14□□□□□ -2.07
ATRXP46100 MIR369-201ENST00000362155 70 ntBASIC2.14□□□□□ -2.07
ATRXP46100 Y_RNA.28-201ENST00000362554 111 ntBASIC2.14□□□□□ -2.07
ATRXP46100 SNORD3E-201ENST00000362899 217 ntBASIC2.14□□□□□ -2.07
ATRXP46100 RNU6-99P-201ENST00000364721 107 ntBASIC2.14□□□□□ -2.07
ATRXP46100 Y_RNA.327-201ENST00000365201 102 ntBASIC2.14□□□□□ -2.07
ATRXP46100 Y_RNA.393-201ENST00000383936 102 ntBASIC2.14□□□□□ -2.07
ATRXP46100 VN1R36P-201ENST00000414936 291 ntBASIC2.14□□□□□ -2.07
ATRXP46100 MTCO2P27-201ENST00000420740 428 ntBASIC2.14□□□□□ -2.07
ATRXP46100 HIGD1AP11-201ENST00000438361 280 ntBASIC2.14□□□□□ -2.07
ATRXP46100 MTND3P2-201ENST00000438452 342 ntBASIC2.14□□□□□ -2.07
ATRXP46100 AC003989.2-201ENST00000440224 169 ntBASIC2.14□□□□□ -2.07
ATRXP46100 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.14□□□□□ -2.07
ATRXP46100 RNU7-152P-201ENST00000458982 64 ntBASIC2.14□□□□□ -2.07
ATRXP46100 AP004217.1-201ENST00000480579 346 ntBASIC2.14□□□□□ -2.07
ATRXP46100 AF186996.7-201ENST00000492781 209 ntBASIC2.14□□□□□ -2.07
ATRXP46100 RNA5SP102-201ENST00000516865 106 ntBASIC2.14□□□□□ -2.07
ATRXP46100 AC090281.1-201ENST00000523019 276 ntBASIC2.14□□□□□ -2.07
ATRXP46100 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.14□□□□□ -2.07
ATRXP46100 AC113195.1-201ENST00000579952 141 ntBASIC2.14□□□□□ -2.07
ATRXP46100 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.14□□□□□ -2.07
ATRXP46100 AC019193.3-201ENST00000609144 554 ntBASIC2.14□□□□□ -2.07
ATRXP46100 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
ATRXP46100 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
ATRXP46100 RPL9P7-201ENST00000330965 580 ntBASIC2.13□□□□□ -2.07
ATRXP46100 SNORA63-201ENST00000363450 132 ntBASIC2.13□□□□□ -2.07
ATRXP46100 RNU6-188P-201ENST00000364207 107 ntBASIC2.13□□□□□ -2.07
ATRXP46100 AL133412.1-201ENST00000380194 2992 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms