Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RNU6-685P-201ENST00000517088 95 ntBASIC1.76□□□□□ -2.13
SSR1P43307 BNIP3P8-201ENST00000597863 560 ntBASIC1.76□□□□□ -2.13
SSR1P43307 AC091304.6-201ENST00000619761 202 ntBASIC1.76□□□□□ -2.13
SSR1P43307 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SSR1P43307 FARSBP1-201ENST00000435808 1778 ntBASIC1.75□□□□□ -2.13
SSR1P43307 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
SSR1P43307 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
SSR1P43307 MIR1-2-201ENST00000384961 85 ntBASIC1.75□□□□□ -2.13
SSR1P43307 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SSR1P43307 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SSR1P43307 CBX3P9-201ENST00000402326 552 ntBASIC1.75□□□□□ -2.13
SSR1P43307 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.75□□□□□ -2.13
SSR1P43307 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.75□□□□□ -2.13
SSR1P43307 MTND1P30-201ENST00000441241 901 ntBASIC1.75□□□□□ -2.13
SSR1P43307 RPL39P29-201ENST00000447779 157 ntBASIC1.75□□□□□ -2.13
SSR1P43307 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.75□□□□□ -2.13
SSR1P43307 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.75□□□□□ -2.13
SSR1P43307 RNA5SP57-201ENST00000459463 123 ntBASIC1.75□□□□□ -2.13
SSR1P43307 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.75□□□□□ -2.13
SSR1P43307 AC114801.2-201ENST00000503825 781 ntBASIC1.75□□□□□ -2.13
SSR1P43307 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC1.75□□□□□ -2.13
SSR1P43307 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.75□□□□□ -2.13
SSR1P43307 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.75□□□□□ -2.13
SSR1P43307 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.75□□□□□ -2.13
SSR1P43307 PTP4A1P4-201ENST00000512479 322 ntBASIC1.75□□□□□ -2.13
SSR1P43307 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.75□□□□□ -2.13
SSR1P43307 AC109329.1-201ENST00000518744 317 ntBASIC1.75□□□□□ -2.13
SSR1P43307 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.75□□□□□ -2.13
SSR1P43307 AC002400.1-201ENST00000569310 726 ntBASIC1.75□□□□□ -2.13
SSR1P43307 Z84480.1-201ENST00000605131 311 ntBASIC1.75□□□□□ -2.13
SSR1P43307 AC092354.1-201ENST00000606057 376 ntBASIC1.75□□□□□ -2.13
SSR1P43307 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.75□□□□□ -2.13
SSR1P43307 AC011155.2-201ENST00000623202 216 ntBASIC1.75□□□□□ -2.13
SSR1P43307 AL603839.4-201ENST00000624658 1005 ntBASIC1.75□□□□□ -2.13
SSR1P43307 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SSR1P43307 RNU6-37P-201ENST00000362692 107 ntBASIC1.74□□□□□ -2.13
SSR1P43307 RNU6-11P-201ENST00000364234 107 ntBASIC1.74□□□□□ -2.13
SSR1P43307 RNU6-487P-201ENST00000365430 104 ntBASIC1.74□□□□□ -2.13
SSR1P43307 RNU6-25P-201ENST00000383873 107 ntBASIC1.74□□□□□ -2.13
SSR1P43307 RNU6-338P-201ENST00000383888 105 ntBASIC1.74□□□□□ -2.13
SSR1P43307 RNU6-1-201ENST00000383898 107 ntBASIC1.74□□□□□ -2.13
SSR1P43307 RNU6-48P-201ENST00000384161 107 ntBASIC1.74□□□□□ -2.13
SSR1P43307 RNU6-36P-201ENST00000384172 107 ntBASIC1.74□□□□□ -2.13
SSR1P43307 RNU6-4P-201ENST00000384205 107 ntBASIC1.74□□□□□ -2.13
SSR1P43307 RNU6-5P-201ENST00000384238 107 ntBASIC1.74□□□□□ -2.13
SSR1P43307 RNU6-3P-201ENST00000384314 107 ntBASIC1.74□□□□□ -2.13
SSR1P43307 RNU6-16P-201ENST00000384385 107 ntBASIC1.74□□□□□ -2.13
SSR1P43307 RNU6-15P-201ENST00000384534 107 ntBASIC1.74□□□□□ -2.13
SSR1P43307 RNU6-2-201ENST00000384627 107 ntBASIC1.74□□□□□ -2.13
SSR1P43307 RNU6-29P-201ENST00000384637 107 ntBASIC1.74□□□□□ -2.13
SSR1P43307 RNU6-9-201ENST00000384776 107 ntBASIC1.74□□□□□ -2.13
SSR1P43307 RNU6-33P-201ENST00000384793 107 ntBASIC1.74□□□□□ -2.13
SSR1P43307 AL031577.2-201ENST00000404133 280 ntBASIC1.74□□□□□ -2.13
SSR1P43307 AL365400.1-201ENST00000431854 640 ntBASIC1.74□□□□□ -2.13
SSR1P43307 AC073614.1-201ENST00000438690 650 ntBASIC1.74□□□□□ -2.13
SSR1P43307 AC007969.2-201ENST00000441891 191 ntBASIC1.74□□□□□ -2.13
SSR1P43307 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.74□□□□□ -2.13
SSR1P43307 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.74□□□□□ -2.13
SSR1P43307 RPS29P23-201ENST00000458635 123 ntBASIC1.74□□□□□ -2.13
SSR1P43307 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.74□□□□□ -2.13
SSR1P43307 MTCYBP40-201ENST00000509390 1135 ntBASIC1.74□□□□□ -2.13
SSR1P43307 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.74□□□□□ -2.13
SSR1P43307 RNU6-1178P-201ENST00000516674 107 ntBASIC1.74□□□□□ -2.13
SSR1P43307 Vault.3-201ENST00000516676 95 ntBASIC1.74□□□□□ -2.13
SSR1P43307 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.74□□□□□ -2.13
SSR1P43307 AC106038.2-201ENST00000520706 568 ntBASIC1.74□□□□□ -2.13
SSR1P43307 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SSR1P43307 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.74□□□□□ -2.13
SSR1P43307 MIR3915-201ENST00000578518 97 ntBASIC1.74□□□□□ -2.13
SSR1P43307 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.74□□□□□ -2.13
SSR1P43307 AC098848.2-201ENST00000588023 330 ntBASIC1.74□□□□□ -2.13
SSR1P43307 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SSR1P43307 AC093424.1-201ENST00000604999 338 ntBASIC1.74□□□□□ -2.13
SSR1P43307 AC123912.5-201ENST00000605470 343 ntBASIC1.74□□□□□ -2.13
SSR1P43307 MIR502-201ENST00000606349 86 ntBASIC1.74□□□□□ -2.13
SSR1P43307 AC025754.2-201ENST00000606491 432 ntBASIC1.74□□□□□ -2.13
SSR1P43307 RNU6-6P-201ENST00000606623 107 ntBASIC1.74□□□□□ -2.13
SSR1P43307 AL391262.2-201ENST00000622466 494 ntBASIC1.74□□□□□ -2.13
SSR1P43307 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.74□□□□□ -2.13
SSR1P43307 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SSR1P43307 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
SSR1P43307 MTND4P4-201ENST00000439033 1366 ntBASIC1.73□□□□□ -2.13
SSR1P43307 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
SSR1P43307 RNU6-527P-201ENST00000363425 104 ntBASIC1.73□□□□□ -2.13
SSR1P43307 RNU5E-7P-201ENST00000365290 117 ntBASIC1.73□□□□□ -2.13
SSR1P43307 SNORD14D-201ENST00000384390 87 ntBASIC1.73□□□□□ -2.13
SSR1P43307 RNU6-297P-201ENST00000384636 107 ntBASIC1.73□□□□□ -2.13
SSR1P43307 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.73□□□□□ -2.13
SSR1P43307 SNORA40.3-201ENST00000390964 122 ntBASIC1.73□□□□□ -2.13
SSR1P43307 RNU6-550P-201ENST00000391057 101 ntBASIC1.73□□□□□ -2.13
SSR1P43307 RNA5SP501-201ENST00000410990 112 ntBASIC1.73□□□□□ -2.13
SSR1P43307 OR6C66P-201ENST00000414917 930 ntBASIC1.73□□□□□ -2.13
SSR1P43307 MTCO3P46-201ENST00000425787 232 ntBASIC1.73□□□□□ -2.13
SSR1P43307 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.73□□□□□ -2.13
SSR1P43307 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.73□□□□□ -2.13
SSR1P43307 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.73□□□□□ -2.13
SSR1P43307 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.73□□□□□ -2.13
SSR1P43307 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.73□□□□□ -2.13
SSR1P43307 GAPDHP17-201ENST00000449858 1001 ntBASIC1.73□□□□□ -2.13
SSR1P43307 RPS29P15-201ENST00000458329 171 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms