Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCNFP41002 ZNF826P-207ENST00000622273 1910 ntBASIC3.91□□□□□ -1.78
CCNFP41002 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCNFP41002 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CCNFP41002 AL079305.1-201ENST00000623159 3008 ntBASIC3.9□□□□□ -1.78
CCNFP41002 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.9□□□□□ -1.79
CCNFP41002 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCNFP41002 Y_RNA.319-201ENST00000365138 92 ntBASIC3.9□□□□□ -1.79
CCNFP41002 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CCNFP41002 MIR487A-201ENST00000385009 80 ntBASIC3.9□□□□□ -1.79
CCNFP41002 AL603910.2-201ENST00000407268 136 ntBASIC3.9□□□□□ -1.79
CCNFP41002 MTHFD2P2-201ENST00000407725 247 ntBASIC3.9□□□□□ -1.79
CCNFP41002 RNA5SP38-201ENST00000410750 119 ntBASIC3.9□□□□□ -1.79
CCNFP41002 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.9□□□□□ -1.79
CCNFP41002 AC139712.2-201ENST00000424302 339 ntBASIC3.9□□□□□ -1.79
CCNFP41002 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.9□□□□□ -1.79
CCNFP41002 AC016632.1-201ENST00000503994 196 ntBASIC3.9□□□□□ -1.79
CCNFP41002 RNU5F-8P-201ENST00000515941 111 ntBASIC3.9□□□□□ -1.79
CCNFP41002 RNU6-1114P-201ENST00000516022 107 ntBASIC3.9□□□□□ -1.79
CCNFP41002 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.9□□□□□ -1.79
CCNFP41002 YPEL5P3-201ENST00000547227 352 ntBASIC3.9□□□□□ -1.79
CCNFP41002 UBL5P4-201ENST00000562584 236 ntBASIC3.9□□□□□ -1.79
CCNFP41002 AC120057.2-201ENST00000571520 271 ntBASIC3.9□□□□□ -1.79
CCNFP41002 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.9□□□□□ -1.79
CCNFP41002 MIR6867-201ENST00000610636 67 ntBASIC3.9□□□□□ -1.79
CCNFP41002 AC034229.5-201ENST00000624258 185 ntBASIC3.9□□□□□ -1.79
CCNFP41002 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCNFP41002 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CCNFP41002 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
CCNFP41002 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCNFP41002 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.89□□□□□ -1.79
CCNFP41002 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CCNFP41002 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CCNFP41002 Y_RNA.20-201ENST00000362479 113 ntBASIC3.89□□□□□ -1.79
CCNFP41002 RNA5SP515-201ENST00000364570 118 ntBASIC3.89□□□□□ -1.79
CCNFP41002 Y_RNA.277-201ENST00000364754 102 ntBASIC3.89□□□□□ -1.79
CCNFP41002 RNA5SP479-201ENST00000364858 117 ntBASIC3.89□□□□□ -1.79
CCNFP41002 RNU6-318P-201ENST00000384283 103 ntBASIC3.89□□□□□ -1.79
CCNFP41002 Y_RNA.518-201ENST00000384552 113 ntBASIC3.89□□□□□ -1.79
CCNFP41002 Y_RNA.541-201ENST00000384640 113 ntBASIC3.89□□□□□ -1.79
CCNFP41002 MRPL35P1-201ENST00000404272 572 ntBASIC3.89□□□□□ -1.79
CCNFP41002 RPL21P65-201ENST00000406094 466 ntBASIC3.89□□□□□ -1.79
CCNFP41002 SNORD12B-201ENST00000410433 91 ntBASIC3.89□□□□□ -1.79
CCNFP41002 AL691449.1-201ENST00000426570 421 ntBASIC3.89□□□□□ -1.79
CCNFP41002 RPL23AP95-201ENST00000426806 265 ntBASIC3.89□□□□□ -1.79
CCNFP41002 EIF1P2-201ENST00000428233 350 ntBASIC3.89□□□□□ -1.79
CCNFP41002 AL714022.1-201ENST00000439897 151 ntBASIC3.89□□□□□ -1.79
CCNFP41002 AC010099.1-201ENST00000455434 375 ntBASIC3.89□□□□□ -1.79
CCNFP41002 snoU13.6-201ENST00000458785 104 ntBASIC3.89□□□□□ -1.79
CCNFP41002 TRBV12-2-201ENST00000489763 344 ntBASIC3.89□□□□□ -1.79
CCNFP41002 RPL21P129-201ENST00000491732 478 ntBASIC3.89□□□□□ -1.79
CCNFP41002 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.89□□□□□ -1.79
CCNFP41002 RNU6-138P-201ENST00000515952 107 ntBASIC3.89□□□□□ -1.79
CCNFP41002 AC006199.1-201ENST00000548728 219 ntBASIC3.89□□□□□ -1.79
CCNFP41002 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.89□□□□□ -1.79
CCNFP41002 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CCNFP41002 AL359198.2-201ENST00000611836 194 ntBASIC3.89□□□□□ -1.79
CCNFP41002 MIR3529-201ENST00000637713 78 ntBASIC3.89□□□□□ -1.79
CCNFP41002 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.89□□□□□ -1.79
CCNFP41002 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.89□□□□□ -1.79
CCNFP41002 AP001486.2-201ENST00000561652 5113 ntBASIC3.89□□□□□ -1.79
CCNFP41002 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CCNFP41002 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCNFP41002 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.88□□□□□ -1.79
CCNFP41002 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCNFP41002 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CCNFP41002 MIR335-201ENST00000362173 94 ntBASIC3.88□□□□□ -1.79
CCNFP41002 SNORD81.1-201ENST00000363064 77 ntBASIC3.88□□□□□ -1.79
CCNFP41002 Y_RNA.462-201ENST00000384268 102 ntBASIC3.88□□□□□ -1.79
CCNFP41002 RNU1-13P-201ENST00000384499 162 ntBASIC3.88□□□□□ -1.79
CCNFP41002 AL590135.1-201ENST00000422215 156 ntBASIC3.88□□□□□ -1.79
CCNFP41002 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.88□□□□□ -1.79
CCNFP41002 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.88□□□□□ -1.79
CCNFP41002 RPL39P29-201ENST00000447779 157 ntBASIC3.88□□□□□ -1.79
CCNFP41002 SUMO1P2-201ENST00000452524 304 ntBASIC3.88□□□□□ -1.79
CCNFP41002 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.88□□□□□ -1.79
CCNFP41002 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.88□□□□□ -1.79
CCNFP41002 SNORA31.6-201ENST00000516241 130 ntBASIC3.88□□□□□ -1.79
CCNFP41002 ACA59.2-201ENST00000517061 156 ntBASIC3.88□□□□□ -1.79
CCNFP41002 AP000867.2-201ENST00000532468 320 ntBASIC3.88□□□□□ -1.79
CCNFP41002 AL356157.2-201ENST00000605122 111 ntBASIC3.88□□□□□ -1.79
CCNFP41002 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.88□□□□□ -1.79
CCNFP41002 AC137590.2-201ENST00000619709 240 ntBASIC3.88□□□□□ -1.79
CCNFP41002 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCNFP41002 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCNFP41002 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCNFP41002 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCNFP41002 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCNFP41002 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCNFP41002 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCNFP41002 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.87□□□□□ -1.79
CCNFP41002 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCNFP41002 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.87□□□□□ -1.79
CCNFP41002 RBBP8P1-201ENST00000449447 1844 ntBASIC3.87□□□□□ -1.79
CCNFP41002 SPRR2C-201ENST00000290702 219 ntBASIC3.87□□□□□ -1.79
CCNFP41002 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CCNFP41002 RNU6-1266P-201ENST00000362794 105 ntBASIC3.87□□□□□ -1.79
CCNFP41002 RNU6-1159P-201ENST00000362933 107 ntBASIC3.87□□□□□ -1.79
CCNFP41002 RNU5B-2P-201ENST00000363036 113 ntBASIC3.87□□□□□ -1.79
CCNFP41002 RNU6-1141P-201ENST00000364520 107 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms