Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 MTND3P12-201ENST00000559068 328 ntBASIC2□□□□□ -2.09
RFC4P35249 AC137800.2-201ENST00000574375 120 ntBASIC2□□□□□ -2.09
RFC4P35249 MIR4421-201ENST00000578133 69 ntBASIC2□□□□□ -2.09
RFC4P35249 AC008521.1-201ENST00000587471 187 ntBASIC2□□□□□ -2.09
RFC4P35249 NIFKP6-201ENST00000598115 845 ntBASIC2□□□□□ -2.09
RFC4P35249 AC090578.1-201ENST00000604955 591 ntBASIC2□□□□□ -2.09
RFC4P35249 AC087045.1-201ENST00000605856 382 ntBASIC2□□□□□ -2.09
RFC4P35249 AL139286.2-201ENST00000606838 396 ntBASIC2□□□□□ -2.09
RFC4P35249 RMST_6.1-201ENST00000611980 203 ntBASIC2□□□□□ -2.09
RFC4P35249 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2□□□□□ -2.09
RFC4P35249 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
RFC4P35249 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
RFC4P35249 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RFC4P35249 RNU6-61P-201ENST00000365528 109 ntBASIC1.99□□□□□ -2.09
RFC4P35249 RNY3P10-201ENST00000384764 102 ntBASIC1.99□□□□□ -2.09
RFC4P35249 MIR578-201ENST00000384828 96 ntBASIC1.99□□□□□ -2.09
RFC4P35249 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
RFC4P35249 SUMO2P12-201ENST00000405924 140 ntBASIC1.99□□□□□ -2.09
RFC4P35249 RNA5SP489-201ENST00000410986 109 ntBASIC1.99□□□□□ -2.09
RFC4P35249 Y_RNA.623-201ENST00000411128 95 ntBASIC1.99□□□□□ -2.09
RFC4P35249 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.99□□□□□ -2.09
RFC4P35249 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.99□□□□□ -2.09
RFC4P35249 CALM2P2-201ENST00000428512 440 ntBASIC1.99□□□□□ -2.09
RFC4P35249 AC073614.1-201ENST00000438690 650 ntBASIC1.99□□□□□ -2.09
RFC4P35249 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.99□□□□□ -2.09
RFC4P35249 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.99□□□□□ -2.09
RFC4P35249 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RFC4P35249 AL033528.1-201ENST00000453780 140 ntBASIC1.99□□□□□ -2.09
RFC4P35249 RPL23AP3-201ENST00000453844 468 ntBASIC1.99□□□□□ -2.09
RFC4P35249 MTCYBP1-201ENST00000454315 1119 ntBASIC1.99□□□□□ -2.09
RFC4P35249 HMGB1P35-201ENST00000503360 598 ntBASIC1.99□□□□□ -2.09
RFC4P35249 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RFC4P35249 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.99□□□□□ -2.09
RFC4P35249 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.99□□□□□ -2.09
RFC4P35249 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.99□□□□□ -2.09
RFC4P35249 PSMA3P-201ENST00000555485 635 ntBASIC1.99□□□□□ -2.09
RFC4P35249 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.99□□□□□ -2.09
RFC4P35249 CLIC4P2-201ENST00000601934 717 ntBASIC1.99□□□□□ -2.09
RFC4P35249 AL022154.1-201ENST00000604698 785 ntBASIC1.99□□□□□ -2.09
RFC4P35249 AL157834.3-201ENST00000615543 103 ntBASIC1.99□□□□□ -2.09
RFC4P35249 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.99□□□□□ -2.09
RFC4P35249 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
RFC4P35249 AC138393.1-203ENST00000327086 343 ntBASIC1.98□□□□□ -2.09
RFC4P35249 U3.4-201ENST00000363352 213 ntBASIC1.98□□□□□ -2.09
RFC4P35249 RNU6-1179P-201ENST00000384667 107 ntBASIC1.98□□□□□ -2.09
RFC4P35249 AL030996.1-201ENST00000411430 235 ntBASIC1.98□□□□□ -2.09
RFC4P35249 AL158823.1-201ENST00000418441 478 ntBASIC1.98□□□□□ -2.09
RFC4P35249 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.98□□□□□ -2.09
RFC4P35249 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.98□□□□□ -2.09
RFC4P35249 AL365338.1-201ENST00000422282 858 ntBASIC1.98□□□□□ -2.09
RFC4P35249 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.98□□□□□ -2.09
RFC4P35249 AC009961.2-201ENST00000435771 251 ntBASIC1.98□□□□□ -2.09
RFC4P35249 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.98□□□□□ -2.09
RFC4P35249 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.98□□□□□ -2.09
RFC4P35249 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.98□□□□□ -2.09
RFC4P35249 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.98□□□□□ -2.09
RFC4P35249 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.98□□□□□ -2.09
RFC4P35249 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.98□□□□□ -2.09
RFC4P35249 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.98□□□□□ -2.09
RFC4P35249 RNU2-44P-201ENST00000516795 194 ntBASIC1.98□□□□□ -2.09
RFC4P35249 RNA5SP364-201ENST00000516938 78 ntBASIC1.98□□□□□ -2.09
RFC4P35249 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.98□□□□□ -2.09
RFC4P35249 AC079598.5-201ENST00000547460 117 ntBASIC1.98□□□□□ -2.09
RFC4P35249 AC087883.1-201ENST00000551882 391 ntBASIC1.98□□□□□ -2.09
RFC4P35249 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RFC4P35249 AC093648.1-201ENST00000623546 606 ntBASIC1.98□□□□□ -2.09
RFC4P35249 AC138627.2-201ENST00000624202 601 ntBASIC1.98□□□□□ -2.09
RFC4P35249 AL359740.1-201ENST00000624340 592 ntBASIC1.98□□□□□ -2.09
RFC4P35249 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.98□□□□□ -2.09
RFC4P35249 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RFC4P35249 SNORA25B-201ENST00000365507 128 ntBASIC1.97□□□□□ -2.09
RFC4P35249 MIR10A-201ENST00000385043 110 ntBASIC1.97□□□□□ -2.09
RFC4P35249 MIR1323-201ENST00000408090 73 ntBASIC1.97□□□□□ -2.09
RFC4P35249 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.97□□□□□ -2.09
RFC4P35249 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.97□□□□□ -2.09
RFC4P35249 PGBD4P6-201ENST00000421501 610 ntBASIC1.97□□□□□ -2.09
RFC4P35249 AC096920.1-201ENST00000423991 241 ntBASIC1.97□□□□□ -2.09
RFC4P35249 RPL31P35-201ENST00000431058 377 ntBASIC1.97□□□□□ -2.09
RFC4P35249 RPS6P15-201ENST00000431996 751 ntBASIC1.97□□□□□ -2.09
RFC4P35249 AC003071.1-201ENST00000451219 789 ntBASIC1.97□□□□□ -2.09
RFC4P35249 snoU109.1-201ENST00000459339 135 ntBASIC1.97□□□□□ -2.09
RFC4P35249 AC116562.3-201ENST00000506136 177 ntBASIC1.97□□□□□ -2.09
RFC4P35249 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.97□□□□□ -2.09
RFC4P35249 SNORA48.11-201ENST00000517015 89 ntBASIC1.97□□□□□ -2.09
RFC4P35249 SNORA31.24-201ENST00000517232 57 ntBASIC1.97□□□□□ -2.09
RFC4P35249 AC090572.1-201ENST00000519251 160 ntBASIC1.97□□□□□ -2.09
RFC4P35249 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.97□□□□□ -2.09
RFC4P35249 AC068587.5-201ENST00000528506 175 ntBASIC1.97□□□□□ -2.09
RFC4P35249 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.97□□□□□ -2.09
RFC4P35249 MIR548AC-201ENST00000585049 88 ntBASIC1.97□□□□□ -2.09
RFC4P35249 AP001506.1-201ENST00000615444 211 ntBASIC1.97□□□□□ -2.09
RFC4P35249 U6.42-201ENST00000618440 107 ntBASIC1.97□□□□□ -2.09
RFC4P35249 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
RFC4P35249 MIR412-201ENST00000362142 91 ntBASIC1.96□□□□□ -2.1
RFC4P35249 RNU6-179P-201ENST00000363350 107 ntBASIC1.96□□□□□ -2.1
RFC4P35249 Y_RNA.191-201ENST00000363972 113 ntBASIC1.96□□□□□ -2.1
RFC4P35249 Y_RNA.576-201ENST00000384781 102 ntBASIC1.96□□□□□ -2.1
RFC4P35249 AL033519.2-201ENST00000403958 392 ntBASIC1.96□□□□□ -2.1
RFC4P35249 RPL21P90-201ENST00000415692 466 ntBASIC1.96□□□□□ -2.1
RFC4P35249 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 135.2 ms