Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AP001004.1-201ENST00000582468 324 ntBASIC0.39□□□□□ -2.35
CKS2P33552 AC026741.1-201ENST00000605892 482 ntBASIC0.39□□□□□ -2.35
CKS2P33552 MIR3976-201ENST00000606807 139 ntBASIC0.39□□□□□ -2.35
CKS2P33552 AC023158.2-201ENST00000614876 543 ntBASIC0.39□□□□□ -2.35
CKS2P33552 MTND5P33-201ENST00000571250 1450 ntBASIC0.39□□□□□ -2.35
CKS2P33552 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.38□□□□□ -2.35
CKS2P33552 AC018630.2-201ENST00000534866 2403 ntBASIC0.38□□□□□ -2.35
CKS2P33552 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
CKS2P33552 Y_RNA.33-201ENST00000362591 102 ntBASIC0.38□□□□□ -2.35
CKS2P33552 RNA5SP361-201ENST00000362686 118 ntBASIC0.38□□□□□ -2.35
CKS2P33552 RNU6-289P-201ENST00000364093 107 ntBASIC0.38□□□□□ -2.35
CKS2P33552 RNU6-853P-201ENST00000364306 107 ntBASIC0.38□□□□□ -2.35
CKS2P33552 RNU6-1019P-201ENST00000364424 107 ntBASIC0.38□□□□□ -2.35
CKS2P33552 SNORD32B-201ENST00000364460 84 ntBASIC0.38□□□□□ -2.35
CKS2P33552 Y_RNA.327-201ENST00000365201 102 ntBASIC0.38□□□□□ -2.35
CKS2P33552 SNORD116-20-201ENST00000384529 92 ntBASIC0.38□□□□□ -2.35
CKS2P33552 MIR1261-201ENST00000408659 82 ntBASIC0.38□□□□□ -2.35
CKS2P33552 RPS3AP1-201ENST00000413190 320 ntBASIC0.38□□□□□ -2.35
CKS2P33552 AC063976.4-201ENST00000421971 163 ntBASIC0.38□□□□□ -2.35
CKS2P33552 MTCYBP5-201ENST00000423752 1135 ntBASIC0.38□□□□□ -2.35
CKS2P33552 AC013262.1-201ENST00000426710 252 ntBASIC0.38□□□□□ -2.35
CKS2P33552 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.38□□□□□ -2.35
CKS2P33552 AC002429.1-201ENST00000437672 148 ntBASIC0.38□□□□□ -2.35
CKS2P33552 AL008629.1-201ENST00000438615 184 ntBASIC0.38□□□□□ -2.35
CKS2P33552 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.38□□□□□ -2.35
CKS2P33552 RN7SKP265-201ENST00000516448 223 ntBASIC0.38□□□□□ -2.35
CKS2P33552 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.38□□□□□ -2.35
CKS2P33552 MIR1273C-201ENST00000578669 77 ntBASIC0.38□□□□□ -2.35
CKS2P33552 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.38□□□□□ -2.35
CKS2P33552 AC098483.2-201ENST00000603158 454 ntBASIC0.38□□□□□ -2.35
CKS2P33552 RPL21P136-201ENST00000605378 396 ntBASIC0.38□□□□□ -2.35
CKS2P33552 AC069545.1-201ENST00000605671 358 ntBASIC0.38□□□□□ -2.35
CKS2P33552 AC090186.1-201ENST00000605991 572 ntBASIC0.38□□□□□ -2.35
CKS2P33552 RNU6-87P-201ENST00000607561 108 ntBASIC0.38□□□□□ -2.35
CKS2P33552 AC009229.3-201ENST00000608056 282 ntBASIC0.38□□□□□ -2.35
CKS2P33552 AL355816.2-201ENST00000610049 647 ntBASIC0.38□□□□□ -2.35
CKS2P33552 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.38□□□□□ -2.35
CKS2P33552 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.38□□□□□ -2.35
CKS2P33552 AC007792.1-201ENST00000623023 402 ntBASIC0.38□□□□□ -2.35
CKS2P33552 AC097460.3-201ENST00000623099 442 ntBASIC0.38□□□□□ -2.35
CKS2P33552 PCMTD1P7-201ENST00000634506 357 ntBASIC0.38□□□□□ -2.35
CKS2P33552 MTND5P42-201ENST00000637720 498 ntBASIC0.38□□□□□ -2.35
CKS2P33552 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.37□□□□□ -2.35
CKS2P33552 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
CKS2P33552 RNU4-79P-201ENST00000362764 141 ntBASIC0.37□□□□□ -2.35
CKS2P33552 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.37□□□□□ -2.35
CKS2P33552 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.37□□□□□ -2.35
CKS2P33552 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.37□□□□□ -2.35
CKS2P33552 FO393414.1-201ENST00000428697 1184 ntBASIC0.37□□□□□ -2.35
CKS2P33552 CALM1P1-201ENST00000442082 433 ntBASIC0.37□□□□□ -2.35
CKS2P33552 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.37□□□□□ -2.35
CKS2P33552 snoU109.2-201ENST00000459316 135 ntBASIC0.37□□□□□ -2.35
CKS2P33552 AC005741.1-201ENST00000511094 432 ntBASIC0.37□□□□□ -2.35
CKS2P33552 RNU6-914P-201ENST00000516749 109 ntBASIC0.37□□□□□ -2.35
CKS2P33552 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.37□□□□□ -2.35
CKS2P33552 AP000907.2-201ENST00000530827 353 ntBASIC0.37□□□□□ -2.35
CKS2P33552 AL590705.4-201ENST00000532209 134 ntBASIC0.37□□□□□ -2.35
CKS2P33552 AC004812.1-201ENST00000540773 146 ntBASIC0.37□□□□□ -2.35
CKS2P33552 AL442163.3-201ENST00000554110 156 ntBASIC0.37□□□□□ -2.35
CKS2P33552 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.37□□□□□ -2.35
CKS2P33552 AC098848.2-201ENST00000588023 330 ntBASIC0.37□□□□□ -2.35
CKS2P33552 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.37□□□□□ -2.35
CKS2P33552 BNIP3P10-201ENST00000605360 577 ntBASIC0.37□□□□□ -2.35
CKS2P33552 AL353997.5-201ENST00000618886 171 ntBASIC0.37□□□□□ -2.35
CKS2P33552 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.37□□□□□ -2.35
CKS2P33552 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.36□□□□□ -2.35
CKS2P33552 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.36□□□□□ -2.35
CKS2P33552 RNU6-862P-201ENST00000362804 105 ntBASIC0.36□□□□□ -2.35
CKS2P33552 MIR520E-201ENST00000384867 87 ntBASIC0.36□□□□□ -2.35
CKS2P33552 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.36□□□□□ -2.35
CKS2P33552 RNU6-910P-201ENST00000390844 107 ntBASIC0.36□□□□□ -2.35
CKS2P33552 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.36□□□□□ -2.35
CKS2P33552 RAB28P5-201ENST00000427490 651 ntBASIC0.36□□□□□ -2.35
CKS2P33552 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.36□□□□□ -2.35
CKS2P33552 CETN4P-201ENST00000432407 469 ntBASIC0.36□□□□□ -2.35
CKS2P33552 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.36□□□□□ -2.35
CKS2P33552 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.36□□□□□ -2.35
CKS2P33552 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
CKS2P33552 RNU6-953P-201ENST00000459154 107 ntBASIC0.36□□□□□ -2.35
CKS2P33552 MTND1P16-201ENST00000465177 898 ntBASIC0.36□□□□□ -2.35
CKS2P33552 MTND1P3-201ENST00000484956 952 ntBASIC0.36□□□□□ -2.35
CKS2P33552 AC008837.2-201ENST00000513076 418 ntBASIC0.36□□□□□ -2.35
CKS2P33552 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.36□□□□□ -2.35
CKS2P33552 AL121579.1-201ENST00000555129 305 ntBASIC0.36□□□□□ -2.35
CKS2P33552 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.36□□□□□ -2.35
CKS2P33552 AC133485.1-201ENST00000567176 124 ntBASIC0.36□□□□□ -2.35
CKS2P33552 AC138907.6-201ENST00000568401 126 ntBASIC0.36□□□□□ -2.35
CKS2P33552 AL133216.2-202ENST00000634512 349 ntBASIC0.36□□□□□ -2.35
CKS2P33552 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.36□□□□□ -2.35
CKS2P33552 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.35□□□□□ -2.35
CKS2P33552 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.35□□□□□ -2.35
CKS2P33552 SNORD3E-201ENST00000362899 217 ntBASIC0.35□□□□□ -2.35
CKS2P33552 SNORD114-27-201ENST00000363766 70 ntBASIC0.35□□□□□ -2.35
CKS2P33552 RNU6-777P-201ENST00000364265 104 ntBASIC0.35□□□□□ -2.35
CKS2P33552 RNU6-354P-201ENST00000383862 107 ntBASIC0.35□□□□□ -2.35
CKS2P33552 RNU6-207P-201ENST00000384137 107 ntBASIC0.35□□□□□ -2.35
CKS2P33552 RNU6-610P-201ENST00000384264 107 ntBASIC0.35□□□□□ -2.35
CKS2P33552 MIR200A-201ENST00000384875 90 ntBASIC0.35□□□□□ -2.35
CKS2P33552 SNORD12-201ENST00000391002 90 ntBASIC0.35□□□□□ -2.35
CKS2P33552 HMGN1P14-201ENST00000412459 517 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms