| CPA3 | P15088 | AC124916.1-201 | ENST00000444020 | 547 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AL592309.2-201 | ENST00000444647 | 607 nt | TSL 5 BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AP000431.2-201 | ENST00000450653 | 790 nt | TSL 2 BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | TH2LCRR-203 | ENST00000457489 | 439 nt | TSL 3 BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU6-717P-201 | ENST00000459076 | 104 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC087884.1-201 | ENST00000469738 | 328 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RPS27P21-201 | ENST00000486977 | 252 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC074124.1-201 | ENST00000502368 | 375 nt | TSL 3 BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU4-29P-201 | ENST00000515943 | 174 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | DEUP1-203 | ENST00000527307 | 767 nt | TSL 3 BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC022880.1-201 | ENST00000534017 | 973 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | EIF4BP1-201 | ENST00000554881 | 351 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | PSMA4-205 | ENST00000558281 | 773 nt | TSL 3 BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC233702.2-202 | ENST00000562547 | 291 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AL589765.7-201 | ENST00000601684 | 629 nt | TSL 3 BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC104073.3-201 | ENST00000610942 | 955 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | uc_338.20-201 | ENST00000621563 | 178 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | CLLU1-201 | ENST00000378485 | 3897 nt | APPRIS P1 TSL 1 (best) BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | LINC01938-201 | ENST00000521341 | 1864 nt | TSL 2 BASIC | 2.18 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AKAP7-209 | ENST00000541650 | 2008 nt | TSL 5 BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | HIF1A-201 | ENST00000323441 | 3555 nt | TSL 1 (best) BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU6-655P-201 | ENST00000362858 | 107 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU6-428P-201 | ENST00000362942 | 107 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | SNORA80A-201 | ENST00000363922 | 136 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | Y_RNA.255-201 | ENST00000364581 | 97 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | Y_RNA.409-201 | ENST00000383990 | 98 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | TRDJ2-201 | ENST00000390475 | 54 nt | APPRIS P1 BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC018816.1-203 | ENST00000441894 | 338 nt | TSL 3 BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | LINC00395-202 | ENST00000451570 | 415 nt | TSL 3 BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AL353752.1-201 | ENST00000454946 | 260 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU7-167P-201 | ENST00000459160 | 62 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | CKS1BP2-201 | ENST00000497342 | 240 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | LIAS-206 | ENST00000513731 | 826 nt | TSL 5 BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AP003469.3-201 | ENST00000518090 | 473 nt | TSL 3 BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AP003034.1-201 | ENST00000534621 | 422 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | PARPBP-209 | ENST00000537257 | 976 nt | TSL 1 (best) BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC090115.3-201 | ENST00000553218 | 849 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AL138976.2-201 | ENST00000563989 | 694 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AL136363.2-201 | ENST00000604173 | 851 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC080013.6-201 | ENST00000606185 | 215 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC139792.3-201 | ENST00000623525 | 224 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC002543.1-201 | ENST00000299783 | 1954 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | PLOD2-204 | ENST00000461497 | 3043 nt | TSL 2 BASIC | 2.17 | □□□□□ -2.06 | | |
| CPA3 | P15088 | CUL2-206 | ENST00000421317 | 2376 nt | TSL 2 BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | KPNA2P1-201 | ENST00000458289 | 1591 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | ZBBX-205 | ENST00000455345 | 3185 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU6-212P-201 | ENST00000362642 | 104 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU6-527P-201 | ENST00000363425 | 104 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | SNORA5B-201 | ENST00000363786 | 132 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU6-336P-201 | ENST00000364891 | 107 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU6-1274P-201 | ENST00000384557 | 107 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | CBX3P9-201 | ENST00000402326 | 552 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AL355497.1-201 | ENST00000406262 | 551 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RN7SKP158-201 | ENST00000410453 | 326 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU2-48P-201 | ENST00000410694 | 191 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AL109924.3-201 | ENST00000413324 | 393 nt | TSL 2 BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AL589987.2-201 | ENST00000417426 | 582 nt | TSL 2 BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AL117339.3-201 | ENST00000418733 | 162 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC243964.1-201 | ENST00000441814 | 261 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC009238.1-201 | ENST00000442165 | 424 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC009237.6-201 | ENST00000446969 | 424 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | PLS1-AS1-201 | ENST00000485338 | 346 nt | TSL 3 BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC010255.2-201 | ENST00000505209 | 428 nt | TSL 3 BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU7-193P-201 | ENST00000516723 | 65 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | RNU6-586P-201 | ENST00000517265 | 104 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC011257.1-201 | ENST00000519048 | 281 nt | TSL 3 BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | COPS8P3-201 | ENST00000526024 | 482 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AP003392.2-201 | ENST00000527269 | 208 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC104383.1-201 | ENST00000530297 | 370 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AL139193.1-201 | ENST00000554967 | 539 nt | TSL 4 BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | CERS3-AS1-201 | ENST00000560643 | 372 nt | TSL 3 BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC018554.1-202 | ENST00000565133 | 444 nt | TSL 3 BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | MIR5002-201 | ENST00000584713 | 97 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | HULC.1-201 | ENST00000612720 | 240 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | AC022202.1-201 | ENST00000613515 | 211 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | uc_338.34-201 | ENST00000617467 | 174 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| CPA3 | P15088 | DYNC2H1-203 | ENST00000398093 | 12945 nt | APPRIS P3 TSL 5 BASIC | 2.15 | □□□□□ -2.06 | | |
| CPA3 | P15088 | TLK1-206 | ENST00000434911 | 2156 nt | TSL 2 BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | SNORA25B-201 | ENST00000365507 | 128 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | MIR544A-201 | ENST00000384855 | 91 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | MIR221-201 | ENST00000385135 | 110 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | RNU2-16P-201 | ENST00000410712 | 136 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | AC009963.1-201 | ENST00000417265 | 157 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | AL356277.2-201 | ENST00000421318 | 441 nt | TSL 2 BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | AL591043.1-201 | ENST00000432461 | 424 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | AC025428.1-201 | ENST00000444137 | 403 nt | TSL 3 BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | RPL39P29-201 | ENST00000447779 | 157 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | MCHR2-AS1-203 | ENST00000451220 | 429 nt | TSL 3 BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | AL122001.1-201 | ENST00000457027 | 370 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | RPL30P1-201 | ENST00000488676 | 339 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | AC034226.1-201 | ENST00000506429 | 487 nt | TSL 2 BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | NAF1-205 | ENST00000509434 | 385 nt | TSL 3 BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | AC016556.1-201 | ENST00000510004 | 935 nt | TSL 2 BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | RNU6-377P-201 | ENST00000515965 | 102 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | AC145141.2-201 | ENST00000518473 | 501 nt | TSL 3 BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | AC139497.1-201 | ENST00000524042 | 501 nt | TSL 5 BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | AC090124.2-201 | ENST00000527727 | 563 nt | TSL 4 BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | AC118273.2-201 | ENST00000532092 | 465 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | MDM2-233 | ENST00000545204 | 398 nt | TSL 5 BASIC | 2.15 | □□□□□ -2.07 | | |
| CPA3 | P15088 | AC024909.2-201 | ENST00000553035 | 286 nt | BASIC | 2.15 | □□□□□ -2.07 | | |