Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 RNU6-1154P-201ENST00000391001 104 ntBASIC4.32□□□□□ -1.72
RARAP10276 RPS26P42-201ENST00000413485 326 ntBASIC4.32□□□□□ -1.72
RARAP10276 AC078809.1-201ENST00000427601 140 ntBASIC4.32□□□□□ -1.72
RARAP10276 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.32□□□□□ -1.72
RARAP10276 AL162725.1-201ENST00000435405 301 ntBASIC4.32□□□□□ -1.72
RARAP10276 RNU6-625P-201ENST00000459412 107 ntBASIC4.32□□□□□ -1.72
RARAP10276 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC4.32□□□□□ -1.72
RARAP10276 MIR2114-201ENST00000516645 80 ntBASIC4.32□□□□□ -1.72
RARAP10276 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RARAP10276 AC021231.3-201ENST00000558497 370 ntBASIC4.32□□□□□ -1.72
RARAP10276 AC022655.2-201ENST00000577280 318 ntBASIC4.32□□□□□ -1.72
RARAP10276 AC091895.1-201ENST00000624494 256 ntBASIC4.32□□□□□ -1.72
RARAP10276 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.32□□□□□ -1.72
RARAP10276 BMS1P21-201ENST00000634565 365 ntBASIC4.32□□□□□ -1.72
RARAP10276 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
RARAP10276 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RARAP10276 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
RARAP10276 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RARAP10276 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.31□□□□□ -1.72
RARAP10276 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.31□□□□□ -1.72
RARAP10276 AC092268.1-201ENST00000342691 405 ntBASIC4.31□□□□□ -1.72
RARAP10276 RNU5F-3P-201ENST00000363767 117 ntBASIC4.31□□□□□ -1.72
RARAP10276 Y_RNA.488-201ENST00000384403 102 ntBASIC4.31□□□□□ -1.72
RARAP10276 RPS15AP5-201ENST00000436276 388 ntBASIC4.31□□□□□ -1.72
RARAP10276 RPL23AP46-201ENST00000438548 490 ntBASIC4.31□□□□□ -1.72
RARAP10276 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.31□□□□□ -1.72
RARAP10276 AC091167.1-201ENST00000492017 396 ntBASIC4.31□□□□□ -1.72
RARAP10276 RPL31P61-201ENST00000496160 376 ntBASIC4.31□□□□□ -1.72
RARAP10276 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.31□□□□□ -1.72
RARAP10276 AC099522.1-202ENST00000514718 367 ntBASIC4.31□□□□□ -1.72
RARAP10276 SCARNA13-201ENST00000516672 275 ntBASIC4.31□□□□□ -1.72
RARAP10276 SUMO2P18-201ENST00000518873 252 ntBASIC4.31□□□□□ -1.72
RARAP10276 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.31□□□□□ -1.72
RARAP10276 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.31□□□□□ -1.72
RARAP10276 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.31□□□□□ -1.72
RARAP10276 AC018448.1-201ENST00000552843 316 ntBASIC4.31□□□□□ -1.72
RARAP10276 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.31□□□□□ -1.72
RARAP10276 AL008718.3-201ENST00000610217 321 ntBASIC4.31□□□□□ -1.72
RARAP10276 AL359198.2-201ENST00000611836 194 ntBASIC4.31□□□□□ -1.72
RARAP10276 AL773545.4-201ENST00000637262 310 ntBASIC4.31□□□□□ -1.72
RARAP10276 AL513478.4-201ENST00000641636 310 ntBASIC4.31□□□□□ -1.72
RARAP10276 MTND5P35-201ENST00000557537 1720 ntBASIC4.31□□□□□ -1.72
RARAP10276 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
RARAP10276 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.31□□□□□ -1.72
RARAP10276 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.31□□□□□ -1.72
RARAP10276 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.31□□□□□ -1.72
RARAP10276 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
RARAP10276 AC092593.1-201ENST00000515413 1815 ntBASIC4.3□□□□□ -1.72
RARAP10276 AC073073.2-201ENST00000609827 2578 ntBASIC4.3□□□□□ -1.72
RARAP10276 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.3□□□□□ -1.72
RARAP10276 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.3□□□□□ -1.72
RARAP10276 Y_RNA.7-201ENST00000362352 102 ntBASIC4.3□□□□□ -1.72
RARAP10276 RNU6-312P-201ENST00000364629 107 ntBASIC4.3□□□□□ -1.72
RARAP10276 SNORA22C-201ENST00000384614 134 ntBASIC4.3□□□□□ -1.72
RARAP10276 MIR186-201ENST00000384988 86 ntBASIC4.3□□□□□ -1.72
RARAP10276 SNORA26.3-201ENST00000391119 136 ntBASIC4.3□□□□□ -1.72
RARAP10276 RPL21P66-201ENST00000426566 466 ntBASIC4.3□□□□□ -1.72
RARAP10276 AC244670.1-201ENST00000436879 112 ntBASIC4.3□□□□□ -1.72
RARAP10276 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.3□□□□□ -1.72
RARAP10276 AC006011.1-201ENST00000442758 349 ntBASIC4.3□□□□□ -1.72
RARAP10276 HMGB3P8-201ENST00000449709 577 ntBASIC4.3□□□□□ -1.72
RARAP10276 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.3□□□□□ -1.72
RARAP10276 RNA5SP246-201ENST00000458909 119 ntBASIC4.3□□□□□ -1.72
RARAP10276 AC146944.2-203ENST00000502493 354 ntBASIC4.3□□□□□ -1.72
RARAP10276 AC139495.1-202ENST00000513164 354 ntBASIC4.3□□□□□ -1.72
RARAP10276 CYCSP23-201ENST00000519781 313 ntBASIC4.3□□□□□ -1.72
RARAP10276 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RARAP10276 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.3□□□□□ -1.72
RARAP10276 MIR3653-201ENST00000625572 110 ntBASIC4.3□□□□□ -1.72
RARAP10276 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RARAP10276 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RARAP10276 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RARAP10276 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.3□□□□□ -1.72
RARAP10276 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RARAP10276 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RARAP10276 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RARAP10276 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RARAP10276 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.29□□□□□ -1.72
RARAP10276 AC022336.2-201ENST00000568966 2538 ntBASIC4.29□□□□□ -1.72
RARAP10276 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RARAP10276 RNU6-1272P-201ENST00000362776 107 ntBASIC4.29□□□□□ -1.72
RARAP10276 RNU6-1285P-201ENST00000363480 105 ntBASIC4.29□□□□□ -1.72
RARAP10276 RNU6-884P-201ENST00000363889 107 ntBASIC4.29□□□□□ -1.72
RARAP10276 Y_RNA.238-201ENST00000364441 102 ntBASIC4.29□□□□□ -1.72
RARAP10276 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.29□□□□□ -1.72
RARAP10276 RNU6-1168P-201ENST00000390831 104 ntBASIC4.29□□□□□ -1.72
RARAP10276 AL357075.1-201ENST00000404107 726 ntBASIC4.29□□□□□ -1.72
RARAP10276 RNU6-1199P-201ENST00000411249 104 ntBASIC4.29□□□□□ -1.72
RARAP10276 BTF3P11-201ENST00000426582 477 ntBASIC4.29□□□□□ -1.72
RARAP10276 RAB28P5-201ENST00000427490 651 ntBASIC4.29□□□□□ -1.72
RARAP10276 FTH1P6-201ENST00000430768 320 ntBASIC4.29□□□□□ -1.72
RARAP10276 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.29□□□□□ -1.72
RARAP10276 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.29□□□□□ -1.72
RARAP10276 AL121594.1-201ENST00000475906 575 ntBASIC4.29□□□□□ -1.72
RARAP10276 RNU7-143P-201ENST00000516781 65 ntBASIC4.29□□□□□ -1.72
RARAP10276 CKS1BP7-201ENST00000522230 235 ntBASIC4.29□□□□□ -1.72
RARAP10276 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.29□□□□□ -1.72
RARAP10276 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.29□□□□□ -1.72
RARAP10276 HSPE1P5-201ENST00000561489 272 ntBASIC4.29□□□□□ -1.72
RARAP10276 MIR3138-201ENST00000585238 82 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms