Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RNU6-150P-201ENST00000516237 95 ntBASIC0.65□□□□□ -2.3
FREM3P0C091 CYCSP23-201ENST00000519781 313 ntBASIC0.65□□□□□ -2.3
FREM3P0C091 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.65□□□□□ -2.3
FREM3P0C091 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.65□□□□□ -2.3
FREM3P0C091 AP003122.4-201ENST00000530980 758 ntBASIC0.65□□□□□ -2.3
FREM3P0C091 HMGB1P33-201ENST00000563485 527 ntBASIC0.65□□□□□ -2.3
FREM3P0C091 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.65□□□□□ -2.3
FREM3P0C091 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.65□□□□□ -2.3
FREM3P0C091 AC008751.2-201ENST00000597885 980 ntBASIC0.65□□□□□ -2.3
FREM3P0C091 AL365434.2-201ENST00000607979 234 ntBASIC0.65□□□□□ -2.3
FREM3P0C091 AL590240.4-201ENST00000616908 390 ntBASIC0.65□□□□□ -2.3
FREM3P0C091 MIR6513-201ENST00000621188 64 ntBASIC0.65□□□□□ -2.3
FREM3P0C091 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.65□□□□□ -2.3
FREM3P0C091 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.65□□□□□ -2.3
FREM3P0C091 MIR330-201ENST00000362196 94 ntBASIC0.65□□□□□ -2.31
FREM3P0C091 RNU6-439P-201ENST00000384188 106 ntBASIC0.65□□□□□ -2.31
FREM3P0C091 MIR146A-201ENST00000385201 99 ntBASIC0.65□□□□□ -2.31
FREM3P0C091 Y_RNA.597-201ENST00000410463 100 ntBASIC0.65□□□□□ -2.31
FREM3P0C091 RNU6-733P-201ENST00000410759 104 ntBASIC0.65□□□□□ -2.31
FREM3P0C091 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.65□□□□□ -2.31
FREM3P0C091 AC132479.1-201ENST00000449160 144 ntBASIC0.65□□□□□ -2.31
FREM3P0C091 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.65□□□□□ -2.31
FREM3P0C091 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.65□□□□□ -2.31
FREM3P0C091 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.65□□□□□ -2.31
FREM3P0C091 SCARNA4-202ENST00000625402 129 ntBASIC0.65□□□□□ -2.31
FREM3P0C091 AL391516.1-201ENST00000554380 2449 ntBASIC0.65□□□□□ -2.31
FREM3P0C091 RNU6-1245P-201ENST00000411130 106 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.64□□□□□ -2.31
FREM3P0C091 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.64□□□□□ -2.31
FREM3P0C091 MTND2P3-201ENST00000452458 470 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 AC087477.1-201ENST00000465747 340 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 AL163195.1-201ENST00000496941 348 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.64□□□□□ -2.31
FREM3P0C091 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.64□□□□□ -2.31
FREM3P0C091 RNA5SP216-201ENST00000516111 123 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 RNU6-229P-201ENST00000516614 102 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 DEFB108A-201ENST00000530110 222 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.64□□□□□ -2.31
FREM3P0C091 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.64□□□□□ -2.31
FREM3P0C091 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.64□□□□□ -2.31
FREM3P0C091 CYP3A52P-201ENST00000563326 91 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 AC136932.1-201ENST00000574771 208 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 MIR5094-201ENST00000578766 85 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.64□□□□□ -2.31
FREM3P0C091 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
FREM3P0C091 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
FREM3P0C091 RNA5SP457-201ENST00000363657 124 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 SNORD114-6-201ENST00000364393 72 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 RNU6-395P-201ENST00000365662 106 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.64□□□□□ -2.31
FREM3P0C091 USP9YP21-201ENST00000420603 432 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.64□□□□□ -2.31
FREM3P0C091 AL596276.1-201ENST00000434465 418 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 GTF2IP13-201ENST00000438487 386 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 JTBP1-201ENST00000441314 247 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 RPS23P4-201ENST00000487908 423 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 RNVU1-2-201ENST00000516326 135 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 AP003484.1-201ENST00000530974 250 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.64□□□□□ -2.31
FREM3P0C091 AC005786.1-201ENST00000588553 154 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.64□□□□□ -2.31
FREM3P0C091 NIFKP6-201ENST00000598115 845 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 AP000860.1-201ENST00000605250 559 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 AL355472.4-201ENST00000610233 626 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 AC008993.2-201ENST00000631744 806 ntBASIC0.64□□□□□ -2.31
FREM3P0C091 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.63□□□□□ -2.31
FREM3P0C091 Y_RNA.178-201ENST00000363832 102 ntBASIC0.63□□□□□ -2.31
FREM3P0C091 RNU1-124P-201ENST00000363861 145 ntBASIC0.63□□□□□ -2.31
FREM3P0C091 Y_RNA.311-201ENST00000365068 96 ntBASIC0.63□□□□□ -2.31
FREM3P0C091 RNU6-438P-201ENST00000365561 103 ntBASIC0.63□□□□□ -2.31
FREM3P0C091 USP9YP33-201ENST00000412220 421 ntBASIC0.63□□□□□ -2.31
FREM3P0C091 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.63□□□□□ -2.31
FREM3P0C091 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.63□□□□□ -2.31
FREM3P0C091 AL627311.1-201ENST00000431514 115 ntBASIC0.63□□□□□ -2.31
FREM3P0C091 FTH1P12-201ENST00000432137 551 ntBASIC0.63□□□□□ -2.31
FREM3P0C091 RPL39P28-201ENST00000465655 155 ntBASIC0.63□□□□□ -2.31
FREM3P0C091 HMGB1P28-201ENST00000507778 552 ntBASIC0.63□□□□□ -2.31
FREM3P0C091 MIR3169-201ENST00000578032 83 ntBASIC0.63□□□□□ -2.31
FREM3P0C091 AP001542.1-201ENST00000591314 200 ntBASIC0.63□□□□□ -2.31
FREM3P0C091 AC022022.2-201ENST00000602989 360 ntBASIC0.63□□□□□ -2.31
FREM3P0C091 AP001981.2-201ENST00000603241 418 ntBASIC0.63□□□□□ -2.31
FREM3P0C091 AC112191.3-201ENST00000604371 277 ntBASIC0.63□□□□□ -2.31
FREM3P0C091 AC123767.1-202ENST00000620407 817 ntBASIC0.63□□□□□ -2.31
FREM3P0C091 AL138955.1-201ENST00000622881 1040 ntBASIC0.63□□□□□ -2.31
FREM3P0C091 AC093875.1-201ENST00000623688 504 ntBASIC0.63□□□□□ -2.31
FREM3P0C091 AC009033.1-201ENST00000624279 431 ntBASIC0.63□□□□□ -2.31
FREM3P0C091 MIR6866-201ENST00000638146 69 ntBASIC0.63□□□□□ -2.31
FREM3P0C091 snoZ40.1-201ENST00000364540 72 ntBASIC0.62□□□□□ -2.31
FREM3P0C091 AL590556.1-201ENST00000423231 483 ntBASIC0.62□□□□□ -2.31
FREM3P0C091 MTCO1P27-201ENST00000448269 226 ntBASIC0.62□□□□□ -2.31
FREM3P0C091 HSPE1P13-201ENST00000451143 297 ntBASIC0.62□□□□□ -2.31
FREM3P0C091 AC021146.8-201ENST00000507455 733 ntBASIC0.62□□□□□ -2.31
FREM3P0C091 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
FREM3P0C091 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.62□□□□□ -2.31
FREM3P0C091 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.62□□□□□ -2.31
FREM3P0C091 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
FREM3P0C091 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.62□□□□□ -2.31
FREM3P0C091 AC006270.3-201ENST00000605967 1036 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms