Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.26□□□□□ -1.89
RHOP08100 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.26□□□□□ -1.89
RHOP08100 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.26□□□□□ -1.89
RHOP08100 HIGD1AP2-201ENST00000446367 280 ntBASIC3.26□□□□□ -1.89
RHOP08100 AC133134.1-201ENST00000466800 359 ntBASIC3.26□□□□□ -1.89
RHOP08100 Y_RNA.687-201ENST00000516558 91 ntBASIC3.26□□□□□ -1.89
RHOP08100 RNU4-77P-201ENST00000516692 156 ntBASIC3.26□□□□□ -1.89
RHOP08100 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.26□□□□□ -1.89
RHOP08100 CYCSP39-201ENST00000565821 309 ntBASIC3.26□□□□□ -1.89
RHOP08100 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.26□□□□□ -1.89
RHOP08100 MIR3976-201ENST00000606807 139 ntBASIC3.26□□□□□ -1.89
RHOP08100 MIR8076-201ENST00000611401 83 ntBASIC3.26□□□□□ -1.89
RHOP08100 AL606534.2-204ENST00000635008 178 ntBASIC3.26□□□□□ -1.89
RHOP08100 U4.7-201ENST00000638126 106 ntBASIC3.26□□□□□ -1.89
RHOP08100 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
RHOP08100 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
RHOP08100 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
RHOP08100 AC000403.1-201ENST00000613696 3585 ntBASIC3.26□□□□□ -1.89
RHOP08100 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
RHOP08100 SRP72P2-201ENST00000344851 1979 ntBASIC3.25□□□□□ -1.89
RHOP08100 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RHOP08100 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RHOP08100 RNU6-778P-201ENST00000363269 103 ntBASIC3.25□□□□□ -1.89
RHOP08100 Y_RNA.455-201ENST00000384230 98 ntBASIC3.25□□□□□ -1.89
RHOP08100 Y_RNA.527-201ENST00000384573 102 ntBASIC3.25□□□□□ -1.89
RHOP08100 SNORA1.3-201ENST00000384676 136 ntBASIC3.25□□□□□ -1.89
RHOP08100 Y_RNA.645-201ENST00000391229 102 ntBASIC3.25□□□□□ -1.89
RHOP08100 RNU2-23P-201ENST00000410545 195 ntBASIC3.25□□□□□ -1.89
RHOP08100 RNA5SP31-201ENST00000411144 127 ntBASIC3.25□□□□□ -1.89
RHOP08100 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.25□□□□□ -1.89
RHOP08100 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RHOP08100 MTCYBP9-201ENST00000431021 303 ntBASIC3.25□□□□□ -1.89
RHOP08100 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.25□□□□□ -1.89
RHOP08100 AC112492.4-201ENST00000456549 352 ntBASIC3.25□□□□□ -1.89
RHOP08100 HMGN2P13-201ENST00000476476 274 ntBASIC3.25□□□□□ -1.89
RHOP08100 AC021205.2-201ENST00000480069 347 ntBASIC3.25□□□□□ -1.89
RHOP08100 AC114801.2-201ENST00000503825 781 ntBASIC3.25□□□□□ -1.89
RHOP08100 MTCO2P24-201ENST00000515611 426 ntBASIC3.25□□□□□ -1.89
RHOP08100 AC103996.1-201ENST00000555468 102 ntBASIC3.25□□□□□ -1.89
RHOP08100 TGIF1P1-201ENST00000558095 802 ntBASIC3.25□□□□□ -1.89
RHOP08100 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.25□□□□□ -1.89
RHOP08100 MIR4782-201ENST00000577987 79 ntBASIC3.25□□□□□ -1.89
RHOP08100 MIR3671-201ENST00000580455 88 ntBASIC3.25□□□□□ -1.89
RHOP08100 MIR4273-201ENST00000582824 84 ntBASIC3.25□□□□□ -1.89
RHOP08100 VN1R107P-201ENST00000601784 209 ntBASIC3.25□□□□□ -1.89
RHOP08100 RMST_8.1-201ENST00000610287 165 ntBASIC3.25□□□□□ -1.89
RHOP08100 AL132822.1-201ENST00000617063 513 ntBASIC3.25□□□□□ -1.89
RHOP08100 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.25□□□□□ -1.89
RHOP08100 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.25□□□□□ -1.89
RHOP08100 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RHOP08100 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.25□□□□□ -1.89
RHOP08100 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.25□□□□□ -1.89
RHOP08100 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
RHOP08100 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RHOP08100 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RHOP08100 AC093010.3-201ENST00000570269 15214 ntBASIC3.25□□□□□ -1.89
RHOP08100 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RHOP08100 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.24□□□□□ -1.89
RHOP08100 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RHOP08100 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RHOP08100 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.24□□□□□ -1.89
RHOP08100 Y_RNA.39-201ENST00000362620 98 ntBASIC3.24□□□□□ -1.89
RHOP08100 RNU6-78P-201ENST00000362897 107 ntBASIC3.24□□□□□ -1.89
RHOP08100 RNY1P16-201ENST00000363063 111 ntBASIC3.24□□□□□ -1.89
RHOP08100 RNU5E-7P-201ENST00000365290 117 ntBASIC3.24□□□□□ -1.89
RHOP08100 Z98749.2-208ENST00000381646 500 ntBASIC3.24□□□□□ -1.89
RHOP08100 RNU6-196P-201ENST00000384315 107 ntBASIC3.24□□□□□ -1.89
RHOP08100 EI24P2-201ENST00000397776 1076 ntBASIC3.24□□□□□ -1.89
RHOP08100 RPS4XP3-201ENST00000398541 413 ntBASIC3.24□□□□□ -1.89
RHOP08100 MIR888-201ENST00000401186 77 ntBASIC3.24□□□□□ -1.89
RHOP08100 RNU6-1077P-201ENST00000410506 102 ntBASIC3.24□□□□□ -1.89
RHOP08100 HMGB3P2-201ENST00000411913 584 ntBASIC3.24□□□□□ -1.89
RHOP08100 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.24□□□□□ -1.89
RHOP08100 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.24□□□□□ -1.89
RHOP08100 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.24□□□□□ -1.89
RHOP08100 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.24□□□□□ -1.89
RHOP08100 AC010265.1-201ENST00000513509 211 ntBASIC3.24□□□□□ -1.89
RHOP08100 RN7SKP272-201ENST00000516988 232 ntBASIC3.24□□□□□ -1.89
RHOP08100 RNU6-1183P-201ENST00000517054 60 ntBASIC3.24□□□□□ -1.89
RHOP08100 Y_RNA.721-201ENST00000517207 102 ntBASIC3.24□□□□□ -1.89
RHOP08100 AP005902.1-201ENST00000521358 186 ntBASIC3.24□□□□□ -1.89
RHOP08100 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.24□□□□□ -1.89
RHOP08100 AMZ2P1-203ENST00000565833 850 ntBASIC3.24□□□□□ -1.89
RHOP08100 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.24□□□□□ -1.89
RHOP08100 MIR5696-201ENST00000578474 85 ntBASIC3.24□□□□□ -1.89
RHOP08100 MIR5701-3-201ENST00000578890 82 ntBASIC3.24□□□□□ -1.89
RHOP08100 AC113195.1-201ENST00000579952 141 ntBASIC3.24□□□□□ -1.89
RHOP08100 MIR5701-1-201ENST00000585138 82 ntBASIC3.24□□□□□ -1.89
RHOP08100 AL158827.2-201ENST00000602494 330 ntBASIC3.24□□□□□ -1.89
RHOP08100 AC104695.3-201ENST00000604052 296 ntBASIC3.24□□□□□ -1.89
RHOP08100 SNORD58B-201ENST00000607313 66 ntBASIC3.24□□□□□ -1.89
RHOP08100 MIR5701-2-201ENST00000615634 82 ntBASIC3.24□□□□□ -1.89
RHOP08100 AC087588.2-201ENST00000617667 426 ntBASIC3.24□□□□□ -1.89
RHOP08100 AL138825.1-201ENST00000618587 192 ntBASIC3.24□□□□□ -1.89
RHOP08100 AL691447.3-201ENST00000635020 330 ntBASIC3.24□□□□□ -1.89
RHOP08100 U6.99-201ENST00000637524 83 ntBASIC3.24□□□□□ -1.89
RHOP08100 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RHOP08100 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
RHOP08100 ZNF826P-207ENST00000622273 1910 ntBASIC3.24□□□□□ -1.89
RHOP08100 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms