Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC139712.2-201ENST00000424302 339 ntBASIC0.79□□□□□ -2.28
CTSDP07339 AL589872.1-201ENST00000426602 288 ntBASIC0.79□□□□□ -2.28
CTSDP07339 AL669831.1-202ENST00000428504 417 ntBASIC0.79□□□□□ -2.28
CTSDP07339 UBE2V1P8-201ENST00000437166 265 ntBASIC0.79□□□□□ -2.28
CTSDP07339 AL135790.2-201ENST00000437701 267 ntBASIC0.79□□□□□ -2.28
CTSDP07339 JTBP1-201ENST00000441314 247 ntBASIC0.79□□□□□ -2.28
CTSDP07339 AC244505.5-201ENST00000443639 207 ntBASIC0.79□□□□□ -2.28
CTSDP07339 USP9YP17-201ENST00000444617 696 ntBASIC0.79□□□□□ -2.28
CTSDP07339 MTND2P4-201ENST00000445034 1004 ntBASIC0.79□□□□□ -2.28
CTSDP07339 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.79□□□□□ -2.28
CTSDP07339 AC130509.1-201ENST00000464158 433 ntBASIC0.79□□□□□ -2.28
CTSDP07339 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CTSDP07339 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.79□□□□□ -2.28
CTSDP07339 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.79□□□□□ -2.28
CTSDP07339 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.79□□□□□ -2.28
CTSDP07339 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.79□□□□□ -2.28
CTSDP07339 AC012414.6-201ENST00000568241 401 ntBASIC0.79□□□□□ -2.28
CTSDP07339 AL353778.1-201ENST00000603149 408 ntBASIC0.79□□□□□ -2.28
CTSDP07339 AP000860.1-201ENST00000605250 559 ntBASIC0.79□□□□□ -2.28
CTSDP07339 AC091965.4-201ENST00000607691 587 ntBASIC0.79□□□□□ -2.28
CTSDP07339 AL355816.2-201ENST00000610049 647 ntBASIC0.79□□□□□ -2.28
CTSDP07339 MIR8063-201ENST00000621930 81 ntBASIC0.79□□□□□ -2.28
CTSDP07339 ICE2P2-201ENST00000483823 2787 ntBASIC0.79□□□□□ -2.28
CTSDP07339 LINC02555-201ENST00000563933 1951 ntBASIC0.78□□□□□ -2.28
CTSDP07339 RNU6-723P-201ENST00000383973 107 ntBASIC0.78□□□□□ -2.28
CTSDP07339 Y_RNA.465-201ENST00000384293 102 ntBASIC0.78□□□□□ -2.28
CTSDP07339 AL136310.1-201ENST00000404926 654 ntBASIC0.78□□□□□ -2.28
CTSDP07339 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.78□□□□□ -2.28
CTSDP07339 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.78□□□□□ -2.28
CTSDP07339 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.78□□□□□ -2.28
CTSDP07339 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.78□□□□□ -2.28
CTSDP07339 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.78□□□□□ -2.28
CTSDP07339 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.78□□□□□ -2.28
CTSDP07339 RNU1-131P-201ENST00000458943 161 ntBASIC0.78□□□□□ -2.28
CTSDP07339 RPL26P26-201ENST00000480251 434 ntBASIC0.78□□□□□ -2.28
CTSDP07339 HMGN1P7-201ENST00000491722 313 ntBASIC0.78□□□□□ -2.28
CTSDP07339 AC079140.2-201ENST00000506193 142 ntBASIC0.78□□□□□ -2.28
CTSDP07339 AC009646.1-201ENST00000510455 318 ntBASIC0.78□□□□□ -2.28
CTSDP07339 Y_RNA.689-201ENST00000516589 107 ntBASIC0.78□□□□□ -2.28
CTSDP07339 RAB11AP2-201ENST00000545905 639 ntBASIC0.78□□□□□ -2.28
CTSDP07339 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.78□□□□□ -2.28
CTSDP07339 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.78□□□□□ -2.28
CTSDP07339 MIR3146-201ENST00000580367 79 ntBASIC0.78□□□□□ -2.28
CTSDP07339 NIFKP6-201ENST00000598115 845 ntBASIC0.78□□□□□ -2.28
CTSDP07339 AC112220.3-201ENST00000605502 502 ntBASIC0.78□□□□□ -2.28
CTSDP07339 PART1_2.1-201ENST00000612397 250 ntBASIC0.78□□□□□ -2.28
CTSDP07339 AL078604.3-201ENST00000615580 211 ntBASIC0.78□□□□□ -2.28
CTSDP07339 AC006386.1-201ENST00000619436 415 ntBASIC0.78□□□□□ -2.28
CTSDP07339 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
CTSDP07339 SNORD33-201ENST00000362761 85 ntBASIC0.77□□□□□ -2.29
CTSDP07339 RNY1P10-201ENST00000363268 113 ntBASIC0.77□□□□□ -2.29
CTSDP07339 RNU6-960P-201ENST00000364056 120 ntBASIC0.77□□□□□ -2.29
CTSDP07339 RNU6-296P-201ENST00000384608 107 ntBASIC0.77□□□□□ -2.29
CTSDP07339 AC069282.1-201ENST00000411911 526 ntBASIC0.77□□□□□ -2.29
CTSDP07339 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.77□□□□□ -2.29
CTSDP07339 BTF3L4P1-201ENST00000413813 468 ntBASIC0.77□□□□□ -2.29
CTSDP07339 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.77□□□□□ -2.29
CTSDP07339 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.77□□□□□ -2.29
CTSDP07339 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.77□□□□□ -2.29
CTSDP07339 FTH1P12-201ENST00000432137 551 ntBASIC0.77□□□□□ -2.29
CTSDP07339 AC027119.1-201ENST00000440877 241 ntBASIC0.77□□□□□ -2.29
CTSDP07339 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.77□□□□□ -2.29
CTSDP07339 TOMM22P6-201ENST00000465035 409 ntBASIC0.77□□□□□ -2.29
CTSDP07339 AL133373.1-201ENST00000497098 94 ntBASIC0.77□□□□□ -2.29
CTSDP07339 MTND2P33-201ENST00000506452 1031 ntBASIC0.77□□□□□ -2.29
CTSDP07339 AC010587.2-201ENST00000511727 448 ntBASIC0.77□□□□□ -2.29
CTSDP07339 AC112206.3-201ENST00000514578 389 ntBASIC0.77□□□□□ -2.29
CTSDP07339 Y_RNA.687-201ENST00000516558 91 ntBASIC0.77□□□□□ -2.29
CTSDP07339 SNORA43.2-201ENST00000516652 128 ntBASIC0.77□□□□□ -2.29
CTSDP07339 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.77□□□□□ -2.29
CTSDP07339 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.77□□□□□ -2.29
CTSDP07339 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.77□□□□□ -2.29
CTSDP07339 MTND4LP25-201ENST00000570218 163 ntBASIC0.77□□□□□ -2.29
CTSDP07339 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.77□□□□□ -2.29
CTSDP07339 AC091135.1-201ENST00000585943 307 ntBASIC0.77□□□□□ -2.29
CTSDP07339 AL136363.2-201ENST00000604173 851 ntBASIC0.77□□□□□ -2.29
CTSDP07339 AL158211.2-201ENST00000607282 395 ntBASIC0.77□□□□□ -2.29
CTSDP07339 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.77□□□□□ -2.29
CTSDP07339 U6.42-201ENST00000618440 107 ntBASIC0.77□□□□□ -2.29
CTSDP07339 AC120349.3-201ENST00000624377 529 ntBASIC0.77□□□□□ -2.29
CTSDP07339 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.77□□□□□ -2.29
CTSDP07339 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
CTSDP07339 AC068205.3-201ENST00000636385 468 ntBASIC0.77□□□□□ -2.29
CTSDP07339 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.77□□□□□ -2.29
CTSDP07339 AC099786.3-201ENST00000565735 1410 ntBASIC0.76□□□□□ -2.29
CTSDP07339 RNY4P24-201ENST00000362735 96 ntBASIC0.76□□□□□ -2.29
CTSDP07339 RNU1-22P-201ENST00000363334 158 ntBASIC0.76□□□□□ -2.29
CTSDP07339 RNU6-1257P-201ENST00000384625 110 ntBASIC0.76□□□□□ -2.29
CTSDP07339 RNU4-22P-201ENST00000411058 166 ntBASIC0.76□□□□□ -2.29
CTSDP07339 RPL21P111-201ENST00000418453 477 ntBASIC0.76□□□□□ -2.29
CTSDP07339 CST2P1-201ENST00000425770 87 ntBASIC0.76□□□□□ -2.29
CTSDP07339 AL008629.1-201ENST00000438615 184 ntBASIC0.76□□□□□ -2.29
CTSDP07339 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.76□□□□□ -2.29
CTSDP07339 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.76□□□□□ -2.29
CTSDP07339 RNU2-10P-201ENST00000516375 211 ntBASIC0.76□□□□□ -2.29
CTSDP07339 RNA5SP490-201ENST00000517141 136 ntBASIC0.76□□□□□ -2.29
CTSDP07339 AC010376.1-201ENST00000522101 334 ntBASIC0.76□□□□□ -2.29
CTSDP07339 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.76□□□□□ -2.29
CTSDP07339 AC023050.2-201ENST00000544968 387 ntBASIC0.76□□□□□ -2.29
CTSDP07339 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms