Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RNA5SP450-201ENST00000411206 102 ntBASIC1.54□□□□□ -2.16
CD74P04233 AL445685.2-201ENST00000422551 342 ntBASIC1.54□□□□□ -2.16
CD74P04233 MTCYBP5-201ENST00000423752 1135 ntBASIC1.54□□□□□ -2.16
CD74P04233 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.54□□□□□ -2.16
CD74P04233 CETN4P-201ENST00000432407 469 ntBASIC1.54□□□□□ -2.16
CD74P04233 MTND2P29-201ENST00000438595 412 ntBASIC1.54□□□□□ -2.16
CD74P04233 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.54□□□□□ -2.16
CD74P04233 KATNBL1P3-201ENST00000443475 909 ntBASIC1.54□□□□□ -2.16
CD74P04233 AC079448.1-201ENST00000449377 373 ntBASIC1.54□□□□□ -2.16
CD74P04233 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.54□□□□□ -2.16
CD74P04233 AC027575.1-201ENST00000481064 460 ntBASIC1.54□□□□□ -2.16
CD74P04233 HMGB1P35-201ENST00000503360 598 ntBASIC1.54□□□□□ -2.16
CD74P04233 AC107393.1-201ENST00000512403 346 ntBASIC1.54□□□□□ -2.16
CD74P04233 RNU6-1178P-201ENST00000516674 107 ntBASIC1.54□□□□□ -2.16
CD74P04233 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.54□□□□□ -2.16
CD74P04233 AC107953.1-201ENST00000522216 297 ntBASIC1.54□□□□□ -2.16
CD74P04233 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CD74P04233 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.54□□□□□ -2.16
CD74P04233 BNIP3P6-201ENST00000549284 499 ntBASIC1.54□□□□□ -2.16
CD74P04233 AC007375.1-201ENST00000554513 578 ntBASIC1.54□□□□□ -2.16
CD74P04233 PSMA3P-201ENST00000555485 635 ntBASIC1.54□□□□□ -2.16
CD74P04233 AC136619.2-201ENST00000563361 631 ntBASIC1.54□□□□□ -2.16
CD74P04233 MIR3618-201ENST00000580330 88 ntBASIC1.54□□□□□ -2.16
CD74P04233 AC010928.2-201ENST00000588017 287 ntBASIC1.54□□□□□ -2.16
CD74P04233 RPL30P11-203ENST00000598995 310 ntBASIC1.54□□□□□ -2.16
CD74P04233 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.54□□□□□ -2.16
CD74P04233 NDUFA8P1-201ENST00000605525 367 ntBASIC1.54□□□□□ -2.16
CD74P04233 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.54□□□□□ -2.16
CD74P04233 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.54□□□□□ -2.16
CD74P04233 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.54□□□□□ -2.16
CD74P04233 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CD74P04233 OR4G2P-201ENST00000328113 903 ntBASIC1.53□□□□□ -2.16
CD74P04233 SNORD56.1-201ENST00000362913 68 ntBASIC1.53□□□□□ -2.16
CD74P04233 RNU6-181P-201ENST00000363225 107 ntBASIC1.53□□□□□ -2.16
CD74P04233 RNU6-1029P-201ENST00000384109 107 ntBASIC1.53□□□□□ -2.16
CD74P04233 RNU6-843P-201ENST00000384454 104 ntBASIC1.53□□□□□ -2.16
CD74P04233 RNU1-57P-201ENST00000384491 166 ntBASIC1.53□□□□□ -2.16
CD74P04233 MIR454-201ENST00000390180 115 ntBASIC1.53□□□□□ -2.16
CD74P04233 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CD74P04233 RNU2-9P-201ENST00000410194 145 ntBASIC1.53□□□□□ -2.16
CD74P04233 AC008267.5-201ENST00000424928 265 ntBASIC1.53□□□□□ -2.16
CD74P04233 AC133104.1-201ENST00000429100 218 ntBASIC1.53□□□□□ -2.16
CD74P04233 HSPE1P21-201ENST00000438283 308 ntBASIC1.53□□□□□ -2.16
CD74P04233 AL031667.1-201ENST00000440222 725 ntBASIC1.53□□□□□ -2.16
CD74P04233 snoU13.23-201ENST00000458863 104 ntBASIC1.53□□□□□ -2.16
CD74P04233 RPL30P12-201ENST00000474666 353 ntBASIC1.53□□□□□ -2.16
CD74P04233 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.53□□□□□ -2.16
CD74P04233 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.53□□□□□ -2.16
CD74P04233 RNU2-53P-201ENST00000516257 147 ntBASIC1.53□□□□□ -2.16
CD74P04233 SNORA43.2-201ENST00000516652 128 ntBASIC1.53□□□□□ -2.16
CD74P04233 Y_RNA.695-201ENST00000516715 107 ntBASIC1.53□□□□□ -2.16
CD74P04233 RNU6-445P-201ENST00000516949 107 ntBASIC1.53□□□□□ -2.16
CD74P04233 RNA5SP503-201ENST00000517047 117 ntBASIC1.53□□□□□ -2.16
CD74P04233 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.53□□□□□ -2.16
CD74P04233 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.53□□□□□ -2.16
CD74P04233 AL713866.2-201ENST00000603579 219 ntBASIC1.53□□□□□ -2.16
CD74P04233 AC006566.1-201ENST00000608943 513 ntBASIC1.53□□□□□ -2.16
CD74P04233 AC022202.1-201ENST00000613515 211 ntBASIC1.53□□□□□ -2.16
CD74P04233 AC090517.3-201ENST00000625170 141 ntBASIC1.53□□□□□ -2.16
CD74P04233 SCARNA4-202ENST00000625402 129 ntBASIC1.53□□□□□ -2.16
CD74P04233 SEPT14P19-203ENST00000633205 211 ntBASIC1.53□□□□□ -2.16
CD74P04233 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
CD74P04233 AL390237.1-201ENST00000404226 1415 ntBASIC1.52□□□□□ -2.17
CD74P04233 RNU6-529P-201ENST00000363383 104 ntBASIC1.52□□□□□ -2.17
CD74P04233 RNU6-1097P-201ENST00000363586 107 ntBASIC1.52□□□□□ -2.17
CD74P04233 RNU6-715P-201ENST00000365204 103 ntBASIC1.52□□□□□ -2.17
CD74P04233 RNU6-108P-201ENST00000365558 107 ntBASIC1.52□□□□□ -2.17
CD74P04233 SNORD116-8-201ENST00000384365 95 ntBASIC1.52□□□□□ -2.17
CD74P04233 RNU6-45P-201ENST00000384471 107 ntBASIC1.52□□□□□ -2.17
CD74P04233 SNORA64-201ENST00000384674 134 ntBASIC1.52□□□□□ -2.17
CD74P04233 MIR186-201ENST00000384988 86 ntBASIC1.52□□□□□ -2.17
CD74P04233 AL591034.2-201ENST00000402839 359 ntBASIC1.52□□□□□ -2.17
CD74P04233 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.52□□□□□ -2.17
CD74P04233 RPS20P15-201ENST00000412792 311 ntBASIC1.52□□□□□ -2.17
CD74P04233 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.52□□□□□ -2.17
CD74P04233 MTATP6P17-201ENST00000431030 672 ntBASIC1.52□□□□□ -2.17
CD74P04233 AL365400.1-201ENST00000431854 640 ntBASIC1.52□□□□□ -2.17
CD74P04233 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.52□□□□□ -2.17
CD74P04233 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.52□□□□□ -2.17
CD74P04233 HMGN2P3-201ENST00000433603 273 ntBASIC1.52□□□□□ -2.17
CD74P04233 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.52□□□□□ -2.17
CD74P04233 IFNA20P-201ENST00000436840 528 ntBASIC1.52□□□□□ -2.17
CD74P04233 HMGN2P5-201ENST00000436882 273 ntBASIC1.52□□□□□ -2.17
CD74P04233 USP9YP29-201ENST00000445112 563 ntBASIC1.52□□□□□ -2.17
CD74P04233 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.52□□□□□ -2.17
CD74P04233 RNU7-182P-201ENST00000459009 62 ntBASIC1.52□□□□□ -2.17
CD74P04233 AP001025.1-201ENST00000486139 332 ntBASIC1.52□□□□□ -2.17
CD74P04233 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.52□□□□□ -2.17
CD74P04233 SNORA4.4-201ENST00000515921 135 ntBASIC1.52□□□□□ -2.17
CD74P04233 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.52□□□□□ -2.17
CD74P04233 CR383656.8-201ENST00000549046 145 ntBASIC1.52□□□□□ -2.17
CD74P04233 SUB1P2-201ENST00000556401 297 ntBASIC1.52□□□□□ -2.17
CD74P04233 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.52□□□□□ -2.17
CD74P04233 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.52□□□□□ -2.17
CD74P04233 AC093249.1-201ENST00000567049 203 ntBASIC1.52□□□□□ -2.17
CD74P04233 DEFB122-202ENST00000569013 197 ntBASIC1.52□□□□□ -2.17
CD74P04233 MIR4775-201ENST00000581168 75 ntBASIC1.52□□□□□ -2.17
CD74P04233 MIR4524B-201ENST00000581569 115 ntBASIC1.52□□□□□ -2.17
CD74P04233 SNRPGP17-201ENST00000603780 214 ntBASIC1.52□□□□□ -2.17
CD74P04233 AL158063.1-201ENST00000615349 536 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms