Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 VN1R80P-201ENST00000597126 338 ntBASIC0.6□□□□□ -2.31
IFNA1P01562 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.6□□□□□ -2.31
IFNA1P01562 AC107304.1-201ENST00000604229 296 ntBASIC0.6□□□□□ -2.31
IFNA1P01562 AL355816.2-201ENST00000610049 647 ntBASIC0.6□□□□□ -2.31
IFNA1P01562 MIR6857-201ENST00000613267 93 ntBASIC0.6□□□□□ -2.31
IFNA1P01562 AC040896.1-201ENST00000613819 479 ntBASIC0.6□□□□□ -2.31
IFNA1P01562 AC104985.3-201ENST00000623479 597 ntBASIC0.6□□□□□ -2.31
IFNA1P01562 AL391987.6-201ENST00000305671 199 ntBASIC0.59□□□□□ -2.31
IFNA1P01562 RNU5A-8P-201ENST00000364102 114 ntBASIC0.59□□□□□ -2.31
IFNA1P01562 RNU6-1019P-201ENST00000364424 107 ntBASIC0.59□□□□□ -2.31
IFNA1P01562 MIR608-201ENST00000384820 100 ntBASIC0.59□□□□□ -2.31
IFNA1P01562 AC004965.1-201ENST00000413033 213 ntBASIC0.59□□□□□ -2.31
IFNA1P01562 AP1B1P2-201ENST00000416196 106 ntBASIC0.59□□□□□ -2.31
IFNA1P01562 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.59□□□□□ -2.31
IFNA1P01562 AL627311.1-201ENST00000431514 115 ntBASIC0.59□□□□□ -2.31
IFNA1P01562 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.59□□□□□ -2.31
IFNA1P01562 AL121890.1-201ENST00000435457 205 ntBASIC0.59□□□□□ -2.31
IFNA1P01562 AC099677.2-201ENST00000436385 175 ntBASIC0.59□□□□□ -2.31
IFNA1P01562 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.59□□□□□ -2.31
IFNA1P01562 AC108059.3-201ENST00000456388 214 ntBASIC0.59□□□□□ -2.31
IFNA1P01562 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.59□□□□□ -2.31
IFNA1P01562 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC0.59□□□□□ -2.31
IFNA1P01562 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.59□□□□□ -2.31
IFNA1P01562 AC087897.1-201ENST00000550134 156 ntBASIC0.59□□□□□ -2.31
IFNA1P01562 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.31
IFNA1P01562 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.59□□□□□ -2.31
IFNA1P01562 AC091135.1-201ENST00000585943 307 ntBASIC0.59□□□□□ -2.31
IFNA1P01562 AC130324.3-201ENST00000614165 542 ntBASIC0.59□□□□□ -2.31
IFNA1P01562 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.59□□□□□ -2.31
IFNA1P01562 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.59□□□□□ -2.31
IFNA1P01562 SCARNA4-202ENST00000625402 129 ntBASIC0.59□□□□□ -2.31
IFNA1P01562 OR4G2P-201ENST00000328113 903 ntBASIC0.58□□□□□ -2.32
IFNA1P01562 MIR340-201ENST00000362125 95 ntBASIC0.58□□□□□ -2.32
IFNA1P01562 SNORD114-24-201ENST00000365029 72 ntBASIC0.58□□□□□ -2.32
IFNA1P01562 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.58□□□□□ -2.32
IFNA1P01562 RNU6-1176P-201ENST00000390955 107 ntBASIC0.58□□□□□ -2.32
IFNA1P01562 RNA5SP213-201ENST00000391031 106 ntBASIC0.58□□□□□ -2.32
IFNA1P01562 SNORA17.3-201ENST00000391159 129 ntBASIC0.58□□□□□ -2.32
IFNA1P01562 AL356776.1-201ENST00000406574 447 ntBASIC0.58□□□□□ -2.32
IFNA1P01562 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.58□□□□□ -2.32
IFNA1P01562 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.58□□□□□ -2.32
IFNA1P01562 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.58□□□□□ -2.32
IFNA1P01562 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.58□□□□□ -2.32
IFNA1P01562 AC006026.2-201ENST00000457376 180 ntBASIC0.58□□□□□ -2.32
IFNA1P01562 snoU13.27-201ENST00000459278 104 ntBASIC0.58□□□□□ -2.32
IFNA1P01562 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.58□□□□□ -2.32
IFNA1P01562 PDCD5P2-201ENST00000507570 312 ntBASIC0.58□□□□□ -2.32
IFNA1P01562 AC099785.1-201ENST00000605697 437 ntBASIC0.58□□□□□ -2.32
IFNA1P01562 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.58□□□□□ -2.32
IFNA1P01562 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.58□□□□□ -2.32
IFNA1P01562 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
IFNA1P01562 MIR412-201ENST00000362142 91 ntBASIC0.57□□□□□ -2.32
IFNA1P01562 MIR378A-201ENST00000362177 66 ntBASIC0.57□□□□□ -2.32
IFNA1P01562 SNORD32B-201ENST00000364460 84 ntBASIC0.57□□□□□ -2.32
IFNA1P01562 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.57□□□□□ -2.32
IFNA1P01562 MIR1261-201ENST00000408659 82 ntBASIC0.57□□□□□ -2.32
IFNA1P01562 BTF3L4P1-201ENST00000413813 468 ntBASIC0.57□□□□□ -2.32
IFNA1P01562 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.57□□□□□ -2.32
IFNA1P01562 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.57□□□□□ -2.32
IFNA1P01562 AC093899.1-201ENST00000457984 376 ntBASIC0.57□□□□□ -2.32
IFNA1P01562 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.57□□□□□ -2.32
IFNA1P01562 TRBVA-201ENST00000498804 316 ntBASIC0.57□□□□□ -2.32
IFNA1P01562 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.57□□□□□ -2.32
IFNA1P01562 AC008751.2-201ENST00000597885 980 ntBASIC0.57□□□□□ -2.32
IFNA1P01562 AL136363.2-201ENST00000604173 851 ntBASIC0.57□□□□□ -2.32
IFNA1P01562 MIR3976-201ENST00000606807 139 ntBASIC0.57□□□□□ -2.32
IFNA1P01562 AL451064.1-201ENST00000607718 471 ntBASIC0.57□□□□□ -2.32
IFNA1P01562 AC091895.1-201ENST00000624494 256 ntBASIC0.57□□□□□ -2.32
IFNA1P01562 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.57□□□□□ -2.32
IFNA1P01562 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
IFNA1P01562 SNORD56.1-201ENST00000362913 68 ntBASIC0.56□□□□□ -2.32
IFNA1P01562 MIR10A-201ENST00000385043 110 ntBASIC0.56□□□□□ -2.32
IFNA1P01562 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.56□□□□□ -2.32
IFNA1P01562 MIR320C1-201ENST00000408566 88 ntBASIC0.56□□□□□ -2.32
IFNA1P01562 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.56□□□□□ -2.32
IFNA1P01562 AC114482.1-201ENST00000418010 247 ntBASIC0.56□□□□□ -2.32
IFNA1P01562 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.56□□□□□ -2.32
IFNA1P01562 RPS26P45-201ENST00000471748 340 ntBASIC0.56□□□□□ -2.32
IFNA1P01562 AC074344.1-201ENST00000512823 224 ntBASIC0.56□□□□□ -2.32
IFNA1P01562 RNU6-322P-201ENST00000516010 103 ntBASIC0.56□□□□□ -2.32
IFNA1P01562 RNU5F-2P-201ENST00000516066 82 ntBASIC0.56□□□□□ -2.32
IFNA1P01562 RNU6-334P-201ENST00000517072 102 ntBASIC0.56□□□□□ -2.32
IFNA1P01562 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.56□□□□□ -2.32
IFNA1P01562 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.56□□□□□ -2.32
IFNA1P01562 AC009977.1-201ENST00000586015 570 ntBASIC0.56□□□□□ -2.32
IFNA1P01562 BNIP3P8-201ENST00000597863 560 ntBASIC0.56□□□□□ -2.32
IFNA1P01562 MIR15A-201ENST00000607334 83 ntBASIC0.56□□□□□ -2.32
IFNA1P01562 AC124016.2-201ENST00000610058 665 ntBASIC0.56□□□□□ -2.32
IFNA1P01562 AL353997.5-201ENST00000618886 171 ntBASIC0.56□□□□□ -2.32
IFNA1P01562 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.55□□□□□ -2.32
IFNA1P01562 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
IFNA1P01562 SMIM11P1-201ENST00000369586 178 ntBASIC0.55□□□□□ -2.32
IFNA1P01562 RNU11-5P-201ENST00000391216 129 ntBASIC0.55□□□□□ -2.32
IFNA1P01562 MIR1284-201ENST00000408337 120 ntBASIC0.55□□□□□ -2.32
IFNA1P01562 RNU6-733P-201ENST00000410759 104 ntBASIC0.55□□□□□ -2.32
IFNA1P01562 MTCO3P41-201ENST00000414801 328 ntBASIC0.55□□□□□ -2.32
IFNA1P01562 AC108667.1-201ENST00000428618 249 ntBASIC0.55□□□□□ -2.32
IFNA1P01562 MTCO3P29-201ENST00000432119 779 ntBASIC0.55□□□□□ -2.32
IFNA1P01562 SNRPEP8-201ENST00000442866 260 ntBASIC0.55□□□□□ -2.32
IFNA1P01562 MTCO1P27-201ENST00000448269 226 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms