Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PRPF40AO75400 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.28□□□□□ -1.72
PRPF40AO75400 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.28□□□□□ -1.72
PRPF40AO75400 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PRPF40AO75400 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PRPF40AO75400 AP001148.1-201ENST00000624124 2359 ntBASIC4.27□□□□□ -1.73
PRPF40AO75400 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.27□□□□□ -1.73
PRPF40AO75400 RNA5SP42-201ENST00000364278 115 ntBASIC4.27□□□□□ -1.73
PRPF40AO75400 Y_RNA.307-201ENST00000365022 117 ntBASIC4.27□□□□□ -1.73
PRPF40AO75400 RNU6-19P-201ENST00000384718 107 ntBASIC4.27□□□□□ -1.73
PRPF40AO75400 RNA5SP424-201ENST00000390988 115 ntBASIC4.27□□□□□ -1.73
PRPF40AO75400 AC245291.1-201ENST00000419501 328 ntBASIC4.27□□□□□ -1.73
PRPF40AO75400 PTGES3P4-201ENST00000426243 356 ntBASIC4.27□□□□□ -1.73
PRPF40AO75400 AL441985.1-201ENST00000457727 251 ntBASIC4.27□□□□□ -1.73
PRPF40AO75400 U8.22-201ENST00000459141 133 ntBASIC4.27□□□□□ -1.73
PRPF40AO75400 RPL30P12-201ENST00000474666 353 ntBASIC4.27□□□□□ -1.73
PRPF40AO75400 AP001025.1-201ENST00000486139 332 ntBASIC4.27□□□□□ -1.73
PRPF40AO75400 SNORD19.2-201ENST00000516978 73 ntBASIC4.27□□□□□ -1.73
PRPF40AO75400 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.27□□□□□ -1.73
PRPF40AO75400 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.27□□□□□ -1.73
PRPF40AO75400 RN7SL703P-201ENST00000578485 302 ntBASIC4.27□□□□□ -1.73
PRPF40AO75400 AC090897.2-201ENST00000581715 130 ntBASIC4.27□□□□□ -1.73
PRPF40AO75400 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PRPF40AO75400 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PRPF40AO75400 AC233263.6-201ENST00000631132 1963 ntBASIC4.27□□□□□ -1.73
PRPF40AO75400 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.27□□□□□ -1.73
PRPF40AO75400 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PRPF40AO75400 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PRPF40AO75400 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.26□□□□□ -1.73
PRPF40AO75400 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.26□□□□□ -1.73
PRPF40AO75400 AC092268.1-201ENST00000342691 405 ntBASIC4.26□□□□□ -1.73
PRPF40AO75400 RNA5SP97-201ENST00000365006 84 ntBASIC4.26□□□□□ -1.73
PRPF40AO75400 RNU6-806P-201ENST00000365147 105 ntBASIC4.26□□□□□ -1.73
PRPF40AO75400 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF40AO75400 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.26□□□□□ -1.73
PRPF40AO75400 RN7SKP202-201ENST00000410439 330 ntBASIC4.26□□□□□ -1.73
PRPF40AO75400 RN7SKP61-201ENST00000410642 295 ntBASIC4.26□□□□□ -1.73
PRPF40AO75400 RNU2-49P-201ENST00000410666 184 ntBASIC4.26□□□□□ -1.73
PRPF40AO75400 RN7SKP27-201ENST00000410684 333 ntBASIC4.26□□□□□ -1.73
PRPF40AO75400 AL159169.1-201ENST00000421119 127 ntBASIC4.26□□□□□ -1.73
PRPF40AO75400 AC006989.1-201ENST00000427212 131 ntBASIC4.26□□□□□ -1.73
PRPF40AO75400 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.26□□□□□ -1.73
PRPF40AO75400 AC244670.1-201ENST00000436879 112 ntBASIC4.26□□□□□ -1.73
PRPF40AO75400 AC010469.2-201ENST00000496412 480 ntBASIC4.26□□□□□ -1.73
PRPF40AO75400 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.26□□□□□ -1.73
PRPF40AO75400 AC067942.3-201ENST00000512025 362 ntBASIC4.26□□□□□ -1.73
PRPF40AO75400 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.26□□□□□ -1.73
PRPF40AO75400 RNU2-53P-201ENST00000516257 147 ntBASIC4.26□□□□□ -1.73
PRPF40AO75400 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
PRPF40AO75400 AC093023.1-201ENST00000547375 507 ntBASIC4.26□□□□□ -1.73
PRPF40AO75400 AC034105.4-201ENST00000568304 277 ntBASIC4.26□□□□□ -1.73
PRPF40AO75400 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.26□□□□□ -1.73
PRPF40AO75400 AL359198.2-201ENST00000611836 194 ntBASIC4.26□□□□□ -1.73
PRPF40AO75400 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.26□□□□□ -1.73
PRPF40AO75400 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF40AO75400 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF40AO75400 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PRPF40AO75400 AL021368.2-201ENST00000606125 5352 ntBASIC4.26□□□□□ -1.73
PRPF40AO75400 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
PRPF40AO75400 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PRPF40AO75400 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PRPF40AO75400 OTUD4P1-201ENST00000237841 3067 ntBASIC4.25□□□□□ -1.73
PRPF40AO75400 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PRPF40AO75400 Y_RNA.26-201ENST00000362539 101 ntBASIC4.25□□□□□ -1.73
PRPF40AO75400 RNA5SP295-201ENST00000362655 121 ntBASIC4.25□□□□□ -1.73
PRPF40AO75400 Y_RNA.376-201ENST00000365638 108 ntBASIC4.25□□□□□ -1.73
PRPF40AO75400 Y_RNA.439-201ENST00000384119 94 ntBASIC4.25□□□□□ -1.73
PRPF40AO75400 Y_RNA.458-201ENST00000384240 102 ntBASIC4.25□□□□□ -1.73
PRPF40AO75400 Y_RNA.489-201ENST00000384410 101 ntBASIC4.25□□□□□ -1.73
PRPF40AO75400 RNU6-130P-201ENST00000411112 103 ntBASIC4.25□□□□□ -1.73
PRPF40AO75400 AC023141.4-201ENST00000412031 328 ntBASIC4.25□□□□□ -1.73
PRPF40AO75400 AC078809.1-201ENST00000427601 140 ntBASIC4.25□□□□□ -1.73
PRPF40AO75400 AC017083.1-201ENST00000428093 483 ntBASIC4.25□□□□□ -1.73
PRPF40AO75400 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.25□□□□□ -1.73
PRPF40AO75400 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.25□□□□□ -1.73
PRPF40AO75400 RNU6-408P-201ENST00000515910 100 ntBASIC4.25□□□□□ -1.73
PRPF40AO75400 RNU6-794P-201ENST00000517261 64 ntBASIC4.25□□□□□ -1.73
PRPF40AO75400 AP003733.2-201ENST00000529409 171 ntBASIC4.25□□□□□ -1.73
PRPF40AO75400 AC021231.3-201ENST00000558497 370 ntBASIC4.25□□□□□ -1.73
PRPF40AO75400 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.25□□□□□ -1.73
PRPF40AO75400 AC096772.1-201ENST00000609146 564 ntBASIC4.25□□□□□ -1.73
PRPF40AO75400 AL391261.4-201ENST00000616012 481 ntBASIC4.25□□□□□ -1.73
PRPF40AO75400 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.25□□□□□ -1.73
PRPF40AO75400 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.25□□□□□ -1.73
PRPF40AO75400 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.25□□□□□ -1.73
PRPF40AO75400 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PRPF40AO75400 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.24□□□□□ -1.73
PRPF40AO75400 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PRPF40AO75400 MIR30E-201ENST00000362104 92 ntBASIC4.24□□□□□ -1.73
PRPF40AO75400 RNU5B-2P-201ENST00000363036 113 ntBASIC4.24□□□□□ -1.73
PRPF40AO75400 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.24□□□□□ -1.73
PRPF40AO75400 RNU6-472P-201ENST00000384299 107 ntBASIC4.24□□□□□ -1.73
PRPF40AO75400 SNORD78.2-201ENST00000391076 69 ntBASIC4.24□□□□□ -1.73
PRPF40AO75400 RNU6-847P-201ENST00000411115 108 ntBASIC4.24□□□□□ -1.73
PRPF40AO75400 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.24□□□□□ -1.73
PRPF40AO75400 LINC01399-202ENST00000458450 244 ntBASIC4.24□□□□□ -1.73
PRPF40AO75400 AP000870.1-201ENST00000472927 406 ntBASIC4.24□□□□□ -1.73
PRPF40AO75400 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC4.24□□□□□ -1.73
PRPF40AO75400 RNU6-570P-201ENST00000517051 105 ntBASIC4.24□□□□□ -1.73
PRPF40AO75400 AC023632.4-201ENST00000517783 191 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms