Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 HMGB3P8-201ENST00000449709 577 ntBASIC4.73□□□□□ -1.65
PTCD1O75127 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.73□□□□□ -1.65
PTCD1O75127 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.73□□□□□ -1.65
PTCD1O75127 AC005000.2-201ENST00000605468 310 ntBASIC4.73□□□□□ -1.65
PTCD1O75127 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.73□□□□□ -1.65
PTCD1O75127 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.73□□□□□ -1.65
PTCD1O75127 MIR8058-201ENST00000615737 89 ntBASIC4.73□□□□□ -1.65
PTCD1O75127 AC240442.1-201ENST00000616055 283 ntBASIC4.73□□□□□ -1.65
PTCD1O75127 U2.21-201ENST00000637295 81 ntBASIC4.73□□□□□ -1.65
PTCD1O75127 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTCD1O75127 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PTCD1O75127 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.72□□□□□ -1.65
PTCD1O75127 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTCD1O75127 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.72□□□□□ -1.65
PTCD1O75127 RNU6-1301P-201ENST00000362724 104 ntBASIC4.72□□□□□ -1.65
PTCD1O75127 RNY4P28-201ENST00000365281 93 ntBASIC4.72□□□□□ -1.65
PTCD1O75127 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC4.72□□□□□ -1.65
PTCD1O75127 RNU6-926P-201ENST00000384075 107 ntBASIC4.72□□□□□ -1.65
PTCD1O75127 UBA52P6-201ENST00000399822 382 ntBASIC4.72□□□□□ -1.65
PTCD1O75127 AC011742.1-201ENST00000431448 434 ntBASIC4.72□□□□□ -1.65
PTCD1O75127 AL031659.1-201ENST00000447075 539 ntBASIC4.72□□□□□ -1.65
PTCD1O75127 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.72□□□□□ -1.65
PTCD1O75127 NDUFS5P3-201ENST00000450668 321 ntBASIC4.72□□□□□ -1.65
PTCD1O75127 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.72□□□□□ -1.65
PTCD1O75127 RPL21P10-201ENST00000463521 490 ntBASIC4.72□□□□□ -1.65
PTCD1O75127 SNRPGP7-201ENST00000469016 106 ntBASIC4.72□□□□□ -1.65
PTCD1O75127 RPS26P21-201ENST00000475397 348 ntBASIC4.72□□□□□ -1.65
PTCD1O75127 AC091874.1-201ENST00000511402 339 ntBASIC4.72□□□□□ -1.65
PTCD1O75127 RNU6-479P-201ENST00000516348 105 ntBASIC4.72□□□□□ -1.65
PTCD1O75127 RNA5SP468-201ENST00000516782 93 ntBASIC4.72□□□□□ -1.65
PTCD1O75127 RN7SKP289-201ENST00000517244 295 ntBASIC4.72□□□□□ -1.65
PTCD1O75127 RN7SKP57-201ENST00000517248 293 ntBASIC4.72□□□□□ -1.65
PTCD1O75127 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.72□□□□□ -1.65
PTCD1O75127 MIR4659A-201ENST00000580269 81 ntBASIC4.72□□□□□ -1.65
PTCD1O75127 AC011921.3-201ENST00000605540 361 ntBASIC4.72□□□□□ -1.65
PTCD1O75127 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
PTCD1O75127 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PTCD1O75127 BX322639.1-202ENST00000423987 2213 ntBASIC4.72□□□□□ -1.65
PTCD1O75127 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
PTCD1O75127 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PTCD1O75127 UBE3AP2-201ENST00000429033 2259 ntBASIC4.71□□□□□ -1.65
PTCD1O75127 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PTCD1O75127 FAM35BP-202ENST00000497389 3337 ntBASIC4.71□□□□□ -1.66
PTCD1O75127 SRP72P2-201ENST00000344851 1979 ntBASIC4.71□□□□□ -1.66
PTCD1O75127 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTCD1O75127 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PTCD1O75127 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTCD1O75127 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.71□□□□□ -1.66
PTCD1O75127 SNORD56.1-201ENST00000362913 68 ntBASIC4.71□□□□□ -1.66
PTCD1O75127 RNU6-942P-201ENST00000363002 107 ntBASIC4.71□□□□□ -1.66
PTCD1O75127 RNU6-879P-201ENST00000364328 108 ntBASIC4.71□□□□□ -1.66
PTCD1O75127 RNU1-140P-201ENST00000365040 165 ntBASIC4.71□□□□□ -1.66
PTCD1O75127 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.71□□□□□ -1.66
PTCD1O75127 RNU6-1286P-201ENST00000383871 107 ntBASIC4.71□□□□□ -1.66
PTCD1O75127 RNU6-937P-201ENST00000384325 106 ntBASIC4.71□□□□□ -1.66
PTCD1O75127 EIF1AXP1-201ENST00000419267 435 ntBASIC4.71□□□□□ -1.66
PTCD1O75127 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.71□□□□□ -1.66
PTCD1O75127 AC115115.1-201ENST00000449927 248 ntBASIC4.71□□□□□ -1.66
PTCD1O75127 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.71□□□□□ -1.66
PTCD1O75127 AC025518.1-201ENST00000479856 347 ntBASIC4.71□□□□□ -1.66
PTCD1O75127 RPL30P1-201ENST00000488676 339 ntBASIC4.71□□□□□ -1.66
PTCD1O75127 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.71□□□□□ -1.66
PTCD1O75127 AC074133.1-201ENST00000515696 183 ntBASIC4.71□□□□□ -1.66
PTCD1O75127 RNU6-1012P-201ENST00000516606 109 ntBASIC4.71□□□□□ -1.66
PTCD1O75127 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.71□□□□□ -1.66
PTCD1O75127 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.71□□□□□ -1.66
PTCD1O75127 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.71□□□□□ -1.66
PTCD1O75127 Z83818.1-201ENST00000603584 150 ntBASIC4.71□□□□□ -1.66
PTCD1O75127 RPL23AP88-201ENST00000605759 454 ntBASIC4.71□□□□□ -1.66
PTCD1O75127 AL365222.1-201ENST00000614661 98 ntBASIC4.71□□□□□ -1.66
PTCD1O75127 AC024581.2-201ENST00000619986 252 ntBASIC4.71□□□□□ -1.66
PTCD1O75127 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.71□□□□□ -1.66
PTCD1O75127 AP000553.6-201ENST00000641242 118 ntBASIC4.71□□□□□ -1.66
PTCD1O75127 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.71□□□□□ -1.66
PTCD1O75127 MAPK10-349ENST00000641767 3661 ntBASIC4.71□□□□□ -1.66
PTCD1O75127 AC068254.2-201ENST00000623938 3577 ntBASIC4.71□□□□□ -1.66
PTCD1O75127 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTCD1O75127 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTCD1O75127 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PTCD1O75127 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
PTCD1O75127 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.71□□□□□ -1.66
PTCD1O75127 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
PTCD1O75127 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTCD1O75127 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTCD1O75127 RNU6-1020P-201ENST00000363684 107 ntBASIC4.7□□□□□ -1.66
PTCD1O75127 RNU6-17P-201ENST00000384245 107 ntBASIC4.7□□□□□ -1.66
PTCD1O75127 RNU6-18P-201ENST00000384527 107 ntBASIC4.7□□□□□ -1.66
PTCD1O75127 SNORD20-201ENST00000384550 80 ntBASIC4.7□□□□□ -1.66
PTCD1O75127 RNU6-959P-201ENST00000384671 107 ntBASIC4.7□□□□□ -1.66
PTCD1O75127 RNU6-1154P-201ENST00000391001 104 ntBASIC4.7□□□□□ -1.66
PTCD1O75127 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.7□□□□□ -1.66
PTCD1O75127 NDUFB4P4-201ENST00000404822 243 ntBASIC4.7□□□□□ -1.66
PTCD1O75127 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.7□□□□□ -1.66
PTCD1O75127 NDUFB4P10-201ENST00000452541 359 ntBASIC4.7□□□□□ -1.66
PTCD1O75127 RN7SL601P-201ENST00000471221 293 ntBASIC4.7□□□□□ -1.66
PTCD1O75127 AC023141.12-201ENST00000512399 199 ntBASIC4.7□□□□□ -1.66
PTCD1O75127 Y_RNA.662-201ENST00000516028 97 ntBASIC4.7□□□□□ -1.66
PTCD1O75127 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.7□□□□□ -1.66
PTCD1O75127 RMST_6.1-201ENST00000611980 203 ntBASIC4.7□□□□□ -1.66
PTCD1O75127 AL133383.2-201ENST00000622958 2336 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms