Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CACNA1FO60840 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
CACNA1FO60840 RNY4P36-201ENST00000391116 96 ntBASIC2.59□□□□□ -2
CACNA1FO60840 AL592114.1-201ENST00000403842 483 ntBASIC2.59□□□□□ -2
CACNA1FO60840 AL359634.1-202ENST00000404721 284 ntBASIC2.59□□□□□ -2
CACNA1FO60840 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.59□□□□□ -2
CACNA1FO60840 snoU13.4-201ENST00000458916 104 ntBASIC2.59□□□□□ -2
CACNA1FO60840 Y_RNA.653-201ENST00000459091 95 ntBASIC2.59□□□□□ -2
CACNA1FO60840 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.59□□□□□ -2
CACNA1FO60840 AC108078.2-201ENST00000510750 236 ntBASIC2.59□□□□□ -2
CACNA1FO60840 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.59□□□□□ -2
CACNA1FO60840 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.59□□□□□ -2
CACNA1FO60840 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.59□□□□□ -2
CACNA1FO60840 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.59□□□□□ -2
CACNA1FO60840 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.59□□□□□ -2
CACNA1FO60840 AC174048.1-201ENST00000603389 144 ntBASIC2.59□□□□□ -2
CACNA1FO60840 AC008962.1-201ENST00000605729 304 ntBASIC2.59□□□□□ -2
CACNA1FO60840 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.59□□□□□ -2
CACNA1FO60840 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
CACNA1FO60840 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
CACNA1FO60840 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.58□□□□□ -2
CACNA1FO60840 Y_RNA.384-201ENST00000383909 102 ntBASIC2.58□□□□□ -2
CACNA1FO60840 Y_RNA.530-201ENST00000384587 101 ntBASIC2.58□□□□□ -2
CACNA1FO60840 BTF3L4P3-201ENST00000418879 476 ntBASIC2.58□□□□□ -2
CACNA1FO60840 BX276092.3-201ENST00000424182 230 ntBASIC2.58□□□□□ -2
CACNA1FO60840 AC093106.2-201ENST00000428212 385 ntBASIC2.58□□□□□ -2
CACNA1FO60840 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.58□□□□□ -2
CACNA1FO60840 PRPS1P1-201ENST00000445305 876 ntBASIC2.58□□□□□ -2
CACNA1FO60840 BTF3P15-201ENST00000455606 336 ntBASIC2.58□□□□□ -2
CACNA1FO60840 AC010631.1-201ENST00000474150 156 ntBASIC2.58□□□□□ -2
CACNA1FO60840 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.58□□□□□ -2
CACNA1FO60840 AL137161.1-201ENST00000532231 390 ntBASIC2.58□□□□□ -2
CACNA1FO60840 SCOCP1-201ENST00000554676 349 ntBASIC2.58□□□□□ -2
CACNA1FO60840 AL138889.2-201ENST00000603883 242 ntBASIC2.58□□□□□ -2
CACNA1FO60840 CYP2C61P-201ENST00000604072 290 ntBASIC2.58□□□□□ -2
CACNA1FO60840 AL121917.1-203ENST00000605534 577 ntBASIC2.58□□□□□ -2
CACNA1FO60840 U2.17-201ENST00000611454 95 ntBASIC2.58□□□□□ -2
CACNA1FO60840 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.58□□□□□ -2
CACNA1FO60840 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
CACNA1FO60840 RNA5SP37-201ENST00000365420 130 ntBASIC2.58□□□□□ -2
CACNA1FO60840 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CACNA1FO60840 MIR514A2-201ENST00000385131 88 ntBASIC2.58□□□□□ -2
CACNA1FO60840 MIR514A3-201ENST00000385132 88 ntBASIC2.58□□□□□ -2
CACNA1FO60840 CISD1P1-201ENST00000393907 327 ntBASIC2.58□□□□□ -2
CACNA1FO60840 MIR548F5-201ENST00000408421 86 ntBASIC2.58□□□□□ -2
CACNA1FO60840 MTCO2P12-201ENST00000427426 682 ntBASIC2.58□□□□□ -2
CACNA1FO60840 Z82205.1-201ENST00000428456 297 ntBASIC2.58□□□□□ -2
CACNA1FO60840 RNU7-180P-201ENST00000459240 63 ntBASIC2.58□□□□□ -2
CACNA1FO60840 AC073901.1-201ENST00000462471 408 ntBASIC2.58□□□□□ -2
CACNA1FO60840 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.58□□□□□ -2
CACNA1FO60840 RNA5SP503-201ENST00000517047 117 ntBASIC2.58□□□□□ -2
CACNA1FO60840 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.58□□□□□ -2
CACNA1FO60840 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.58□□□□□ -2
CACNA1FO60840 RPL23AP78-201ENST00000599928 470 ntBASIC2.58□□□□□ -2
CACNA1FO60840 AC005336.3-201ENST00000623833 2679 ntBASIC2.58□□□□□ -2
CACNA1FO60840 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CACNA1FO60840 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CACNA1FO60840 AC121333.1-201ENST00000567488 2709 ntBASIC2.57□□□□□ -2
CACNA1FO60840 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.57□□□□□ -2
CACNA1FO60840 HSPA8P4-201ENST00000511877 1920 ntBASIC2.57□□□□□ -2
CACNA1FO60840 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
CACNA1FO60840 SNORA1.3-201ENST00000384676 136 ntBASIC2.57□□□□□ -2
CACNA1FO60840 RNU6-550P-201ENST00000391057 101 ntBASIC2.57□□□□□ -2
CACNA1FO60840 RNU4-78P-201ENST00000410940 126 ntBASIC2.57□□□□□ -2
CACNA1FO60840 AL139396.1-201ENST00000421137 167 ntBASIC2.57□□□□□ -2
CACNA1FO60840 GPM6BP2-201ENST00000432046 144 ntBASIC2.57□□□□□ -2
CACNA1FO60840 RPS3AP52-201ENST00000435639 297 ntBASIC2.57□□□□□ -2
CACNA1FO60840 HIGD1AP11-201ENST00000438361 280 ntBASIC2.57□□□□□ -2
CACNA1FO60840 MTCYBP6-201ENST00000441810 138 ntBASIC2.57□□□□□ -2
CACNA1FO60840 GPM6BP1-201ENST00000446387 144 ntBASIC2.57□□□□□ -2
CACNA1FO60840 SNORD19B-201ENST00000459623 84 ntBASIC2.57□□□□□ -2
CACNA1FO60840 SNORA31.26-201ENST00000517250 137 ntBASIC2.57□□□□□ -2
CACNA1FO60840 FRG2DP-202ENST00000566967 323 ntBASIC2.57□□□□□ -2
CACNA1FO60840 XIAPP1-201ENST00000603162 600 ntBASIC2.57□□□□□ -2
CACNA1FO60840 APOOP1-201ENST00000604695 592 ntBASIC2.57□□□□□ -2
CACNA1FO60840 AC124303.1-201ENST00000605703 360 ntBASIC2.57□□□□□ -2
CACNA1FO60840 MIR6845-201ENST00000613182 61 ntBASIC2.57□□□□□ -2
CACNA1FO60840 MTND4LP32-201ENST00000636111 270 ntBASIC2.57□□□□□ -2
CACNA1FO60840 MTND5P10-201ENST00000603719 1809 ntBASIC2.57□□□□□ -2
CACNA1FO60840 TPTE2P4-201ENST00000258589 1605 ntBASIC2.56□□□□□ -2
CACNA1FO60840 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.56□□□□□ -2
CACNA1FO60840 Y_RNA.112-201ENST00000363250 102 ntBASIC2.56□□□□□ -2
CACNA1FO60840 RNU6-254P-201ENST00000363377 107 ntBASIC2.56□□□□□ -2
CACNA1FO60840 RNU6-960P-201ENST00000364056 120 ntBASIC2.56□□□□□ -2
CACNA1FO60840 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CACNA1FO60840 SNORA22B-201ENST00000383876 138 ntBASIC2.56□□□□□ -2
CACNA1FO60840 SNORA24.1-201ENST00000384401 135 ntBASIC2.56□□□□□ -2
CACNA1FO60840 RNU6-601P-201ENST00000384540 107 ntBASIC2.56□□□□□ -2
CACNA1FO60840 Y_RNA.579-201ENST00000390939 94 ntBASIC2.56□□□□□ -2
CACNA1FO60840 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.56□□□□□ -2
CACNA1FO60840 MIR548P-201ENST00000408336 84 ntBASIC2.56□□□□□ -2
CACNA1FO60840 SSXP9-201ENST00000417503 292 ntBASIC2.56□□□□□ -2
CACNA1FO60840 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.56□□□□□ -2
CACNA1FO60840 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.56□□□□□ -2
CACNA1FO60840 HMGB1P27-201ENST00000431429 603 ntBASIC2.56□□□□□ -2
CACNA1FO60840 AC107399.1-201ENST00000451226 265 ntBASIC2.56□□□□□ -2
CACNA1FO60840 TRBVA-201ENST00000498804 316 ntBASIC2.56□□□□□ -2
CACNA1FO60840 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.56□□□□□ -2
CACNA1FO60840 SNORA14.1-201ENST00000516113 141 ntBASIC2.56□□□□□ -2
CACNA1FO60840 AC105029.1-201ENST00000520250 669 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms