Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 MIR5571-201ENST00000577998 113 ntBASIC2.33□□□□□ -2.04
SNX3O60493 CTHRC1P1-201ENST00000605383 469 ntBASIC2.33□□□□□ -2.04
SNX3O60493 AC104458.1-201ENST00000608243 463 ntBASIC2.33□□□□□ -2.04
SNX3O60493 AC007014.2-201ENST00000615581 479 ntBASIC2.33□□□□□ -2.04
SNX3O60493 MIR8057-201ENST00000620957 69 ntBASIC2.33□□□□□ -2.04
SNX3O60493 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.33□□□□□ -2.04
SNX3O60493 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SNX3O60493 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.33□□□□□ -2.04
SNX3O60493 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SNX3O60493 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SNX3O60493 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SNX3O60493 Y_RNA.40-201ENST00000362645 93 ntBASIC2.32□□□□□ -2.04
SNX3O60493 U3.12-201ENST00000364498 214 ntBASIC2.32□□□□□ -2.04
SNX3O60493 RNU1-140P-201ENST00000365040 165 ntBASIC2.32□□□□□ -2.04
SNX3O60493 RNU6-1072P-201ENST00000384703 107 ntBASIC2.32□□□□□ -2.04
SNX3O60493 RNU6-443P-201ENST00000384780 107 ntBASIC2.32□□□□□ -2.04
SNX3O60493 MIR23B-201ENST00000384832 97 ntBASIC2.32□□□□□ -2.04
SNX3O60493 MIR544A-201ENST00000384855 91 ntBASIC2.32□□□□□ -2.04
SNX3O60493 MIR186-201ENST00000384988 86 ntBASIC2.32□□□□□ -2.04
SNX3O60493 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.32□□□□□ -2.04
SNX3O60493 AL135938.1-201ENST00000443141 297 ntBASIC2.32□□□□□ -2.04
SNX3O60493 RPS29P25-201ENST00000481709 171 ntBASIC2.32□□□□□ -2.04
SNX3O60493 AC097462.2-201ENST00000504623 481 ntBASIC2.32□□□□□ -2.04
SNX3O60493 AK3P2-201ENST00000507976 429 ntBASIC2.32□□□□□ -2.04
SNX3O60493 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.32□□□□□ -2.04
SNX3O60493 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.32□□□□□ -2.04
SNX3O60493 RPPH1-2P-201ENST00000516688 293 ntBASIC2.32□□□□□ -2.04
SNX3O60493 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.32□□□□□ -2.04
SNX3O60493 AC109329.1-201ENST00000518744 317 ntBASIC2.32□□□□□ -2.04
SNX3O60493 AC087854.1-201ENST00000519706 414 ntBASIC2.32□□□□□ -2.04
SNX3O60493 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.32□□□□□ -2.04
SNX3O60493 AC025423.5-201ENST00000550230 219 ntBASIC2.32□□□□□ -2.04
SNX3O60493 AL133241.1-201ENST00000556832 487 ntBASIC2.32□□□□□ -2.04
SNX3O60493 AC023824.2-201ENST00000566185 400 ntBASIC2.32□□□□□ -2.04
SNX3O60493 AP003465.2-201ENST00000602571 373 ntBASIC2.32□□□□□ -2.04
SNX3O60493 AC073410.2-201ENST00000603240 332 ntBASIC2.32□□□□□ -2.04
SNX3O60493 AP000907.4-201ENST00000604143 237 ntBASIC2.32□□□□□ -2.04
SNX3O60493 AC107304.1-201ENST00000604229 296 ntBASIC2.32□□□□□ -2.04
SNX3O60493 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
SNX3O60493 uc_338.15-201ENST00000615470 191 ntBASIC2.32□□□□□ -2.04
SNX3O60493 MIR3662-201ENST00000637030 95 ntBASIC2.32□□□□□ -2.04
SNX3O60493 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.32□□□□□ -2.04
SNX3O60493 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.31□□□□□ -2.04
SNX3O60493 AC135776.4-201ENST00000624300 1904 ntBASIC2.31□□□□□ -2.04
SNX3O60493 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
SNX3O60493 RNA5SP125-201ENST00000364843 120 ntBASIC2.31□□□□□ -2.04
SNX3O60493 RNA5SP37-201ENST00000365420 130 ntBASIC2.31□□□□□ -2.04
SNX3O60493 RNU6-692P-201ENST00000384496 107 ntBASIC2.31□□□□□ -2.04
SNX3O60493 MIR27B-201ENST00000385129 97 ntBASIC2.31□□□□□ -2.04
SNX3O60493 AL360182.1-201ENST00000397433 468 ntBASIC2.31□□□□□ -2.04
SNX3O60493 RPS29P13-201ENST00000402041 169 ntBASIC2.31□□□□□ -2.04
SNX3O60493 MIR1277-201ENST00000408536 78 ntBASIC2.31□□□□□ -2.04
SNX3O60493 RNU2-23P-201ENST00000410545 195 ntBASIC2.31□□□□□ -2.04
SNX3O60493 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.31□□□□□ -2.04
SNX3O60493 RPS3AP44-201ENST00000425466 790 ntBASIC2.31□□□□□ -2.04
SNX3O60493 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SNX3O60493 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.31□□□□□ -2.04
SNX3O60493 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.31□□□□□ -2.04
SNX3O60493 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.31□□□□□ -2.04
SNX3O60493 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SNX3O60493 RNU7-26P-201ENST00000458980 63 ntBASIC2.31□□□□□ -2.04
SNX3O60493 AC090255.1-201ENST00000495779 349 ntBASIC2.31□□□□□ -2.04
SNX3O60493 MTCYBP18-201ENST00000501056 747 ntBASIC2.31□□□□□ -2.04
SNX3O60493 MTND4LP26-201ENST00000518144 282 ntBASIC2.31□□□□□ -2.04
SNX3O60493 AP000763.2-201ENST00000540641 163 ntBASIC2.31□□□□□ -2.04
SNX3O60493 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.31□□□□□ -2.04
SNX3O60493 AC007179.3-201ENST00000604976 235 ntBASIC2.31□□□□□ -2.04
SNX3O60493 FAM157A-202ENST00000615155 405 ntBASIC2.31□□□□□ -2.04
SNX3O60493 AC009233.1-201ENST00000616477 371 ntBASIC2.31□□□□□ -2.04
SNX3O60493 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
SNX3O60493 AC016717.2-201ENST00000609089 5141 ntBASIC2.31□□□□□ -2.04
SNX3O60493 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
SNX3O60493 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
SNX3O60493 RNU6-212P-201ENST00000362642 104 ntBASIC2.3□□□□□ -2.04
SNX3O60493 RNU6-301P-201ENST00000384277 107 ntBASIC2.3□□□□□ -2.04
SNX3O60493 RNU6-373P-201ENST00000411247 98 ntBASIC2.3□□□□□ -2.04
SNX3O60493 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.3□□□□□ -2.04
SNX3O60493 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.3□□□□□ -2.04
SNX3O60493 RPL39P29-201ENST00000447779 157 ntBASIC2.3□□□□□ -2.04
SNX3O60493 AC008526.1-201ENST00000509149 338 ntBASIC2.3□□□□□ -2.04
SNX3O60493 AC096725.1-201ENST00000514266 313 ntBASIC2.3□□□□□ -2.04
SNX3O60493 RNU2-53P-201ENST00000516257 147 ntBASIC2.3□□□□□ -2.04
SNX3O60493 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.3□□□□□ -2.04
SNX3O60493 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.3□□□□□ -2.04
SNX3O60493 AC104576.1-201ENST00000524225 88 ntBASIC2.3□□□□□ -2.04
SNX3O60493 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SNX3O60493 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.3□□□□□ -2.04
SNX3O60493 BNIP3P16-201ENST00000589779 534 ntBASIC2.3□□□□□ -2.04
SNX3O60493 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
SNX3O60493 AC064836.2-201ENST00000609491 462 ntBASIC2.3□□□□□ -2.04
SNX3O60493 AC092794.1-201ENST00000612734 582 ntBASIC2.3□□□□□ -2.04
SNX3O60493 AL159153.1-201ENST00000619688 317 ntBASIC2.3□□□□□ -2.04
SNX3O60493 AC007792.1-201ENST00000623023 402 ntBASIC2.3□□□□□ -2.04
SNX3O60493 AC090617.10-201ENST00000624308 134 ntBASIC2.3□□□□□ -2.04
SNX3O60493 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.3□□□□□ -2.04
SNX3O60493 AC241585.2-209ENST00000638217 143 ntBASIC2.3□□□□□ -2.04
SNX3O60493 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SNX3O60493 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.29□□□□□ -2.04
SNX3O60493 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SNX3O60493 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms