Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC090543.2-201ENST00000483963 348 ntBASIC4.28□□□□□ -1.72
GRIN3BO60391 AC004057.1-201ENST00000485827 348 ntBASIC4.28□□□□□ -1.72
GRIN3BO60391 RNA5SP468-201ENST00000516782 93 ntBASIC4.28□□□□□ -1.72
GRIN3BO60391 AC091144.1-201ENST00000519573 138 ntBASIC4.28□□□□□ -1.72
GRIN3BO60391 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.28□□□□□ -1.72
GRIN3BO60391 CYCSP39-201ENST00000565821 309 ntBASIC4.28□□□□□ -1.72
GRIN3BO60391 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.28□□□□□ -1.72
GRIN3BO60391 AC104581.2-201ENST00000572227 430 ntBASIC4.28□□□□□ -1.72
GRIN3BO60391 FTX_3.1-201ENST00000610451 147 ntBASIC4.28□□□□□ -1.72
GRIN3BO60391 AC018692.3-201ENST00000623929 123 ntBASIC4.28□□□□□ -1.72
GRIN3BO60391 U2.21-201ENST00000637295 81 ntBASIC4.28□□□□□ -1.72
GRIN3BO60391 U6.104-201ENST00000637979 90 ntBASIC4.28□□□□□ -1.72
GRIN3BO60391 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
GRIN3BO60391 Y_RNA.150-201ENST00000363562 102 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 RNU6-200P-201ENST00000364743 107 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 SNORA54-201ENST00000384281 123 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 Y_RNA.483-201ENST00000384380 101 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 Y_RNA.518-201ENST00000384552 113 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 Y_RNA.562-201ENST00000384695 113 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 MIR493-201ENST00000385254 89 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 PCNPP3-201ENST00000393579 471 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 MIR1302-6-201ENST00000408466 90 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 U3.37-201ENST00000408528 213 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 RNA5SP293-201ENST00000410527 113 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 RNU2-38P-201ENST00000410856 79 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 AL590135.1-201ENST00000422215 156 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 AL512844.2-201ENST00000433990 593 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 AL356535.1-201ENST00000440335 398 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 AC006026.2-201ENST00000457376 180 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 AC109925.1-201ENST00000478069 331 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
GRIN3BO60391 RNA5SP356-201ENST00000515972 94 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 RNU6-1023P-201ENST00000516137 106 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 SNORA40.15-201ENST00000516884 107 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 AC010186.2-204ENST00000537668 439 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.27□□□□□ -1.73
GRIN3BO60391 ZNF192P1-203ENST00000565888 810 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 AC090517.1-201ENST00000569307 266 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 AC090617.7-201ENST00000623952 126 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 U6.99-201ENST00000637524 83 ntBASIC4.27□□□□□ -1.73
GRIN3BO60391 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
GRIN3BO60391 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
GRIN3BO60391 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
GRIN3BO60391 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
GRIN3BO60391 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
GRIN3BO60391 AC008725.1-201ENST00000605123 2263 ntBASIC4.26□□□□□ -1.73
GRIN3BO60391 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
GRIN3BO60391 RNU6-600P-201ENST00000362524 99 ntBASIC4.26□□□□□ -1.73
GRIN3BO60391 RNU6-105P-201ENST00000363909 104 ntBASIC4.26□□□□□ -1.73
GRIN3BO60391 RNU6-611P-201ENST00000384276 104 ntBASIC4.26□□□□□ -1.73
GRIN3BO60391 MIR325-201ENST00000385260 98 ntBASIC4.26□□□□□ -1.73
GRIN3BO60391 RNU2-71P-201ENST00000411395 189 ntBASIC4.26□□□□□ -1.73
GRIN3BO60391 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.26□□□□□ -1.73
GRIN3BO60391 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.26□□□□□ -1.73
GRIN3BO60391 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.26□□□□□ -1.73
GRIN3BO60391 RNU6-1183P-201ENST00000517054 60 ntBASIC4.26□□□□□ -1.73
GRIN3BO60391 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.26□□□□□ -1.73
GRIN3BO60391 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.26□□□□□ -1.73
GRIN3BO60391 MIR3133-201ENST00000583157 78 ntBASIC4.26□□□□□ -1.73
GRIN3BO60391 AC078899.3-201ENST00000599065 212 ntBASIC4.26□□□□□ -1.73
GRIN3BO60391 AC024153.1-201ENST00000603103 365 ntBASIC4.26□□□□□ -1.73
GRIN3BO60391 MIR4727-201ENST00000622232 55 ntBASIC4.26□□□□□ -1.73
GRIN3BO60391 AC010615.1-201ENST00000594254 1764 ntBASIC4.26□□□□□ -1.73
GRIN3BO60391 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
GRIN3BO60391 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
GRIN3BO60391 AC090740.1-201ENST00000623193 2262 ntBASIC4.25□□□□□ -1.73
GRIN3BO60391 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
GRIN3BO60391 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
GRIN3BO60391 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.25□□□□□ -1.73
GRIN3BO60391 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
GRIN3BO60391 RNU1-76P-201ENST00000362903 159 ntBASIC4.25□□□□□ -1.73
GRIN3BO60391 Y_RNA.222-201ENST00000364264 102 ntBASIC4.25□□□□□ -1.73
GRIN3BO60391 Y_RNA.785-201ENST00000384290 109 ntBASIC4.25□□□□□ -1.73
GRIN3BO60391 Y_RNA.477-201ENST00000384352 108 ntBASIC4.25□□□□□ -1.73
GRIN3BO60391 MIR190B-201ENST00000401119 79 ntBASIC4.25□□□□□ -1.73
GRIN3BO60391 RPL26P27-201ENST00000414397 437 ntBASIC4.25□□□□□ -1.73
GRIN3BO60391 AC069285.2-201ENST00000440210 275 ntBASIC4.25□□□□□ -1.73
GRIN3BO60391 AC104332.1-201ENST00000440471 797 ntBASIC4.25□□□□□ -1.73
GRIN3BO60391 AC124916.1-201ENST00000444020 547 ntBASIC4.25□□□□□ -1.73
GRIN3BO60391 snoU109.2-201ENST00000459316 135 ntBASIC4.25□□□□□ -1.73
GRIN3BO60391 SNORA31.18-201ENST00000517043 134 ntBASIC4.25□□□□□ -1.73
GRIN3BO60391 RNU6-897P-201ENST00000517135 105 ntBASIC4.25□□□□□ -1.73
GRIN3BO60391 AC090281.1-201ENST00000523019 276 ntBASIC4.25□□□□□ -1.73
GRIN3BO60391 AP004607.1-201ENST00000524456 203 ntBASIC4.25□□□□□ -1.73
GRIN3BO60391 AC090877.1-201ENST00000561418 344 ntBASIC4.25□□□□□ -1.73
GRIN3BO60391 AC006557.5-201ENST00000603126 811 ntBASIC4.25□□□□□ -1.73
GRIN3BO60391 AC103858.2-201ENST00000621471 543 ntBASIC4.25□□□□□ -1.73
GRIN3BO60391 AC130454.1-201ENST00000622948 401 ntBASIC4.25□□□□□ -1.73
GRIN3BO60391 IGHVIII-44-202ENST00000636235 289 ntBASIC4.25□□□□□ -1.73
GRIN3BO60391 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
GRIN3BO60391 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
GRIN3BO60391 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
GRIN3BO60391 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.25□□□□□ -1.73
GRIN3BO60391 AL356274.2-201ENST00000624379 3752 ntBASIC4.25□□□□□ -1.73
GRIN3BO60391 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
GRIN3BO60391 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
GRIN3BO60391 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.24□□□□□ -1.73
GRIN3BO60391 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
GRIN3BO60391 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
GRIN3BO60391 AC018555.1-201ENST00000567548 1980 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms