Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA12O60330 MTND4P27-201ENST00000450813 1354 ntBASIC3.38□□□□□ -1.87
PCDHGA12O60330 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA12O60330 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHGA12O60330 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA12O60330 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA12O60330 AC092268.1-201ENST00000342691 405 ntBASIC3.37□□□□□ -1.87
PCDHGA12O60330 RNA5SP374-201ENST00000362939 125 ntBASIC3.37□□□□□ -1.87
PCDHGA12O60330 Y_RNA.123-201ENST00000363338 102 ntBASIC3.37□□□□□ -1.87
PCDHGA12O60330 U3.6-201ENST00000363622 211 ntBASIC3.37□□□□□ -1.87
PCDHGA12O60330 RNU6-1083P-201ENST00000384022 107 ntBASIC3.37□□□□□ -1.87
PCDHGA12O60330 RNU6-331P-201ENST00000384724 107 ntBASIC3.37□□□□□ -1.87
PCDHGA12O60330 U3.26-201ENST00000391236 204 ntBASIC3.37□□□□□ -1.87
PCDHGA12O60330 MTCYBP2-201ENST00000407745 171 ntBASIC3.37□□□□□ -1.87
PCDHGA12O60330 RN7SKP61-201ENST00000410642 295 ntBASIC3.37□□□□□ -1.87
PCDHGA12O60330 AL354751.2-201ENST00000415471 210 ntBASIC3.37□□□□□ -1.87
PCDHGA12O60330 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA12O60330 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA12O60330 RPL23AP95-201ENST00000426806 265 ntBASIC3.37□□□□□ -1.87
PCDHGA12O60330 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA12O60330 AL513124.1-201ENST00000450410 614 ntBASIC3.37□□□□□ -1.87
PCDHGA12O60330 Y_RNA.631-201ENST00000459607 101 ntBASIC3.37□□□□□ -1.87
PCDHGA12O60330 S100A11P2-201ENST00000467589 312 ntBASIC3.37□□□□□ -1.87
PCDHGA12O60330 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHGA12O60330 RPL17P19-201ENST00000489069 552 ntBASIC3.37□□□□□ -1.87
PCDHGA12O60330 AC104564.1-201ENST00000493028 407 ntBASIC3.37□□□□□ -1.87
PCDHGA12O60330 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA12O60330 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.37□□□□□ -1.87
PCDHGA12O60330 RNA5SP384-201ENST00000516615 116 ntBASIC3.37□□□□□ -1.87
PCDHGA12O60330 TGIF1P1-201ENST00000558095 802 ntBASIC3.37□□□□□ -1.87
PCDHGA12O60330 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHGA12O60330 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA12O60330 AC009318.2-201ENST00000610917 651 ntBASIC3.37□□□□□ -1.87
PCDHGA12O60330 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PCDHGA12O60330 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
PCDHGA12O60330 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA12O60330 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA12O60330 AL035425.3-201ENST00000564206 4996 ntBASIC3.37□□□□□ -1.87
PCDHGA12O60330 AP003122.5-201ENST00000527668 3766 ntBASIC3.37□□□□□ -1.87
PCDHGA12O60330 AL353743.1-202ENST00000431724 1695 ntBASIC3.36□□□□□ -1.87
PCDHGA12O60330 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PCDHGA12O60330 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGA12O60330 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PCDHGA12O60330 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PCDHGA12O60330 RNU1-140P-201ENST00000365040 165 ntBASIC3.36□□□□□ -1.87
PCDHGA12O60330 AP002088.1-201ENST00000382740 395 ntBASIC3.36□□□□□ -1.87
PCDHGA12O60330 Y_RNA.473-201ENST00000384333 102 ntBASIC3.36□□□□□ -1.87
PCDHGA12O60330 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PCDHGA12O60330 AL512633.1-201ENST00000399931 655 ntBASIC3.36□□□□□ -1.87
PCDHGA12O60330 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.36□□□□□ -1.87
PCDHGA12O60330 RNU4-47P-201ENST00000410876 114 ntBASIC3.36□□□□□ -1.87
PCDHGA12O60330 CYCSP48-201ENST00000417124 323 ntBASIC3.36□□□□□ -1.87
PCDHGA12O60330 BX276092.3-201ENST00000424182 230 ntBASIC3.36□□□□□ -1.87
PCDHGA12O60330 AC009414.1-201ENST00000427200 443 ntBASIC3.36□□□□□ -1.87
PCDHGA12O60330 AC099799.1-201ENST00000439809 192 ntBASIC3.36□□□□□ -1.87
PCDHGA12O60330 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGA12O60330 RN7SKP210-201ENST00000459176 261 ntBASIC3.36□□□□□ -1.87
PCDHGA12O60330 RPL27AP5-201ENST00000469428 449 ntBASIC3.36□□□□□ -1.87
PCDHGA12O60330 AP006245.1-201ENST00000522549 120 ntBASIC3.36□□□□□ -1.87
PCDHGA12O60330 SNRPGP18-201ENST00000553000 214 ntBASIC3.36□□□□□ -1.87
PCDHGA12O60330 AC007375.1-201ENST00000554513 578 ntBASIC3.36□□□□□ -1.87
PCDHGA12O60330 SUB1P3-201ENST00000564581 315 ntBASIC3.36□□□□□ -1.87
PCDHGA12O60330 MIR4276-201ENST00000584832 70 ntBASIC3.36□□□□□ -1.87
PCDHGA12O60330 AC137590.2-201ENST00000619709 240 ntBASIC3.36□□□□□ -1.87
PCDHGA12O60330 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA12O60330 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA12O60330 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA12O60330 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
PCDHGA12O60330 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHGA12O60330 AL109809.4-201ENST00000603520 2185 ntBASIC3.35□□□□□ -1.87
PCDHGA12O60330 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHGA12O60330 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHGA12O60330 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
PCDHGA12O60330 MIR30E-201ENST00000362104 92 ntBASIC3.35□□□□□ -1.87
PCDHGA12O60330 Y_RNA.112-201ENST00000363250 102 ntBASIC3.35□□□□□ -1.87
PCDHGA12O60330 RNU6-595P-201ENST00000363944 107 ntBASIC3.35□□□□□ -1.87
PCDHGA12O60330 SNORD32A-201ENST00000364805 84 ntBASIC3.35□□□□□ -1.87
PCDHGA12O60330 Y_RNA.445-201ENST00000384168 102 ntBASIC3.35□□□□□ -1.87
PCDHGA12O60330 MIR559-201ENST00000385188 96 ntBASIC3.35□□□□□ -1.87
PCDHGA12O60330 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
PCDHGA12O60330 MIR548P-201ENST00000408336 84 ntBASIC3.35□□□□□ -1.87
PCDHGA12O60330 RNU2-23P-201ENST00000410545 195 ntBASIC3.35□□□□□ -1.87
PCDHGA12O60330 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA12O60330 NUP35P1-201ENST00000422734 947 ntBASIC3.35□□□□□ -1.87
PCDHGA12O60330 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.35□□□□□ -1.87
PCDHGA12O60330 AC004383.1-201ENST00000438135 289 ntBASIC3.35□□□□□ -1.87
PCDHGA12O60330 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA12O60330 Z75741.1-201ENST00000446793 314 ntBASIC3.35□□□□□ -1.87
PCDHGA12O60330 AL031659.1-201ENST00000447075 539 ntBASIC3.35□□□□□ -1.87
PCDHGA12O60330 AC010401.1-201ENST00000463867 348 ntBASIC3.35□□□□□ -1.87
PCDHGA12O60330 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA12O60330 AC022493.2-201ENST00000506122 481 ntBASIC3.35□□□□□ -1.87
PCDHGA12O60330 SEM1P1-201ENST00000506694 209 ntBASIC3.35□□□□□ -1.87
PCDHGA12O60330 SCARNA11.3-201ENST00000517276 130 ntBASIC3.35□□□□□ -1.87
PCDHGA12O60330 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA12O60330 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA12O60330 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.35□□□□□ -1.87
PCDHGA12O60330 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA12O60330 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA12O60330 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms