Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.27□□□□□ -1.89
PEX1O43933 AC099506.2-201ENST00000623074 221 ntBASIC3.27□□□□□ -1.89
PEX1O43933 AC093831.2-201ENST00000624393 3427 ntBASIC3.27□□□□□ -1.89
PEX1O43933 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PEX1O43933 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
PEX1O43933 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PEX1O43933 ZNF299P-201ENST00000406845 1804 ntBASIC3.26□□□□□ -1.89
PEX1O43933 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.26□□□□□ -1.89
PEX1O43933 RNU6-874P-201ENST00000362390 105 ntBASIC3.26□□□□□ -1.89
PEX1O43933 RNU6-595P-201ENST00000363944 107 ntBASIC3.26□□□□□ -1.89
PEX1O43933 Y_RNA.188-201ENST00000363952 111 ntBASIC3.26□□□□□ -1.89
PEX1O43933 RNU6-336P-201ENST00000364891 107 ntBASIC3.26□□□□□ -1.89
PEX1O43933 Y_RNA.380-201ENST00000365663 111 ntBASIC3.26□□□□□ -1.89
PEX1O43933 Y_RNA.396-201ENST00000383949 103 ntBASIC3.26□□□□□ -1.89
PEX1O43933 RNU6-140P-201ENST00000384566 108 ntBASIC3.26□□□□□ -1.89
PEX1O43933 RNU6-1197P-201ENST00000391183 107 ntBASIC3.26□□□□□ -1.89
PEX1O43933 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PEX1O43933 RPL21P1-201ENST00000399532 476 ntBASIC3.26□□□□□ -1.89
PEX1O43933 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.26□□□□□ -1.89
PEX1O43933 AL590383.1-201ENST00000428602 75 ntBASIC3.26□□□□□ -1.89
PEX1O43933 AC244505.4-201ENST00000434905 287 ntBASIC3.26□□□□□ -1.89
PEX1O43933 SSXP5-201ENST00000443473 287 ntBASIC3.26□□□□□ -1.89
PEX1O43933 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.26□□□□□ -1.89
PEX1O43933 AC079354.2-201ENST00000453523 154 ntBASIC3.26□□□□□ -1.89
PEX1O43933 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.26□□□□□ -1.89
PEX1O43933 AC093663.1-201ENST00000497190 394 ntBASIC3.26□□□□□ -1.89
PEX1O43933 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.26□□□□□ -1.89
PEX1O43933 AC074250.1-201ENST00000511117 192 ntBASIC3.26□□□□□ -1.89
PEX1O43933 Y_RNA.668-201ENST00000516233 93 ntBASIC3.26□□□□□ -1.89
PEX1O43933 AC005476.1-201ENST00000554427 397 ntBASIC3.26□□□□□ -1.89
PEX1O43933 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.26□□□□□ -1.89
PEX1O43933 CYCSP39-201ENST00000565821 309 ntBASIC3.26□□□□□ -1.89
PEX1O43933 AC006600.1-201ENST00000572529 153 ntBASIC3.26□□□□□ -1.89
PEX1O43933 AC004852.3-201ENST00000614131 326 ntBASIC3.26□□□□□ -1.89
PEX1O43933 AP003355.3-201ENST00000623465 114 ntBASIC3.26□□□□□ -1.89
PEX1O43933 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.26□□□□□ -1.89
PEX1O43933 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PEX1O43933 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.26□□□□□ -1.89
PEX1O43933 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
PEX1O43933 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
PEX1O43933 AC002546.1-201ENST00000588041 2504 ntBASIC3.26□□□□□ -1.89
PEX1O43933 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.25□□□□□ -1.89
PEX1O43933 MTND5P9-201ENST00000503854 1755 ntBASIC3.25□□□□□ -1.89
PEX1O43933 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PEX1O43933 Y_RNA.26-201ENST00000362539 101 ntBASIC3.25□□□□□ -1.89
PEX1O43933 SNORA51.4-201ENST00000364993 124 ntBASIC3.25□□□□□ -1.89
PEX1O43933 DYNLT3P1-201ENST00000378574 347 ntBASIC3.25□□□□□ -1.89
PEX1O43933 RNU6-72P-201ENST00000384285 79 ntBASIC3.25□□□□□ -1.89
PEX1O43933 RNU6-784P-201ENST00000384330 106 ntBASIC3.25□□□□□ -1.89
PEX1O43933 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
PEX1O43933 Y_RNA.618-201ENST00000410949 107 ntBASIC3.25□□□□□ -1.89
PEX1O43933 RN7SKP53-201ENST00000411337 315 ntBASIC3.25□□□□□ -1.89
PEX1O43933 DBIP2-201ENST00000419076 262 ntBASIC3.25□□□□□ -1.89
PEX1O43933 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.25□□□□□ -1.89
PEX1O43933 EIF4EP2-201ENST00000422816 654 ntBASIC3.25□□□□□ -1.89
PEX1O43933 NDUFB4P6-201ENST00000436819 366 ntBASIC3.25□□□□□ -1.89
PEX1O43933 DYNLT3P2-201ENST00000442517 295 ntBASIC3.25□□□□□ -1.89
PEX1O43933 PCNPP5-201ENST00000452246 481 ntBASIC3.25□□□□□ -1.89
PEX1O43933 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.25□□□□□ -1.89
PEX1O43933 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.25□□□□□ -1.89
PEX1O43933 U8.21-201ENST00000459536 136 ntBASIC3.25□□□□□ -1.89
PEX1O43933 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.25□□□□□ -1.89
PEX1O43933 RNA5SP217-201ENST00000515959 91 ntBASIC3.25□□□□□ -1.89
PEX1O43933 RNU6-703P-201ENST00000516946 107 ntBASIC3.25□□□□□ -1.89
PEX1O43933 RNU6-1271P-201ENST00000517049 105 ntBASIC3.25□□□□□ -1.89
PEX1O43933 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.25□□□□□ -1.89
PEX1O43933 AC007458.1-201ENST00000542812 373 ntBASIC3.25□□□□□ -1.89
PEX1O43933 H3F3AP1-201ENST00000559984 334 ntBASIC3.25□□□□□ -1.89
PEX1O43933 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.25□□□□□ -1.89
PEX1O43933 MIR3668-201ENST00000582138 75 ntBASIC3.25□□□□□ -1.89
PEX1O43933 MIR4506-201ENST00000584693 77 ntBASIC3.25□□□□□ -1.89
PEX1O43933 AC016727.2-201ENST00000603988 621 ntBASIC3.25□□□□□ -1.89
PEX1O43933 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.25□□□□□ -1.89
PEX1O43933 AC009318.2-201ENST00000610917 651 ntBASIC3.25□□□□□ -1.89
PEX1O43933 U2.1-201ENST00000618978 145 ntBASIC3.25□□□□□ -1.89
PEX1O43933 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.25□□□□□ -1.89
PEX1O43933 U6.99-201ENST00000637524 83 ntBASIC3.25□□□□□ -1.89
PEX1O43933 U4.7-201ENST00000638126 106 ntBASIC3.25□□□□□ -1.89
PEX1O43933 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.25□□□□□ -1.89
PEX1O43933 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.25□□□□□ -1.89
PEX1O43933 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.25□□□□□ -1.89
PEX1O43933 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
PEX1O43933 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.24□□□□□ -1.89
PEX1O43933 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.24□□□□□ -1.89
PEX1O43933 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
PEX1O43933 AC093010.3-201ENST00000570269 15214 ntBASIC3.24□□□□□ -1.89
PEX1O43933 RNU6-78P-201ENST00000362897 107 ntBASIC3.24□□□□□ -1.89
PEX1O43933 Y_RNA.222-201ENST00000364264 102 ntBASIC3.24□□□□□ -1.89
PEX1O43933 RNU6-708P-201ENST00000384217 107 ntBASIC3.24□□□□□ -1.89
PEX1O43933 MIR490-201ENST00000384865 128 ntBASIC3.24□□□□□ -1.89
PEX1O43933 MIR34A-201ENST00000385130 110 ntBASIC3.24□□□□□ -1.89
PEX1O43933 MT-TR-201ENST00000387439 65 ntBASIC3.24□□□□□ -1.89
PEX1O43933 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.24□□□□□ -1.89
PEX1O43933 RNA5SP494-201ENST00000410653 129 ntBASIC3.24□□□□□ -1.89
PEX1O43933 ELOCP20-201ENST00000422460 345 ntBASIC3.24□□□□□ -1.89
PEX1O43933 TOMM20P4-201ENST00000427861 435 ntBASIC3.24□□□□□ -1.89
PEX1O43933 AC092423.1-201ENST00000430165 186 ntBASIC3.24□□□□□ -1.89
PEX1O43933 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.24□□□□□ -1.89
PEX1O43933 RBMY2UP-201ENST00000453474 324 ntBASIC3.24□□□□□ -1.89
PEX1O43933 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms