Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 MIR2682-201ENST00000580305 110 ntBASIC2.96□□□□□ -1.94
SLC28A2O43868 MIR4506-201ENST00000584693 77 ntBASIC2.96□□□□□ -1.94
SLC28A2O43868 AL355598.1-201ENST00000604169 202 ntBASIC2.96□□□□□ -1.94
SLC28A2O43868 AC124312.5-201ENST00000604451 268 ntBASIC2.96□□□□□ -1.94
SLC28A2O43868 AC090425.1-201ENST00000610007 140 ntBASIC2.96□□□□□ -1.94
SLC28A2O43868 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.96□□□□□ -1.94
SLC28A2O43868 AC034102.8-201ENST00000615146 484 ntBASIC2.96□□□□□ -1.94
SLC28A2O43868 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.96□□□□□ -1.94
SLC28A2O43868 U4.1-201ENST00000620349 87 ntBASIC2.96□□□□□ -1.94
SLC28A2O43868 AC006111.3-201ENST00000622137 383 ntBASIC2.96□□□□□ -1.94
SLC28A2O43868 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
SLC28A2O43868 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SLC28A2O43868 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.96□□□□□ -1.94
SLC28A2O43868 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SLC28A2O43868 CDC27P3-201ENST00000635418 1910 ntBASIC2.95□□□□□ -1.94
SLC28A2O43868 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SLC28A2O43868 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SLC28A2O43868 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SLC28A2O43868 Y_RNA.149-201ENST00000363558 117 ntBASIC2.95□□□□□ -1.94
SLC28A2O43868 RNU6-842P-201ENST00000384269 107 ntBASIC2.95□□□□□ -1.94
SLC28A2O43868 RNU6-1197P-201ENST00000391183 107 ntBASIC2.95□□□□□ -1.94
SLC28A2O43868 BMS1P22-201ENST00000414726 313 ntBASIC2.95□□□□□ -1.94
SLC28A2O43868 AC080125.1-201ENST00000414888 684 ntBASIC2.95□□□□□ -1.94
SLC28A2O43868 USMG5P1-201ENST00000425964 177 ntBASIC2.95□□□□□ -1.94
SLC28A2O43868 AC096644.2-201ENST00000429278 159 ntBASIC2.95□□□□□ -1.94
SLC28A2O43868 AL645568.3-201ENST00000433683 316 ntBASIC2.95□□□□□ -1.94
SLC28A2O43868 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.95□□□□□ -1.94
SLC28A2O43868 AC009237.8-201ENST00000445492 379 ntBASIC2.95□□□□□ -1.94
SLC28A2O43868 RNU7-187P-201ENST00000458985 68 ntBASIC2.95□□□□□ -1.94
SLC28A2O43868 AC022493.2-201ENST00000506122 481 ntBASIC2.95□□□□□ -1.94
SLC28A2O43868 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC28A2O43868 MTND3P25-201ENST00000509243 135 ntBASIC2.95□□□□□ -1.94
SLC28A2O43868 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.95□□□□□ -1.94
SLC28A2O43868 RNA5SP367-201ENST00000516557 118 ntBASIC2.95□□□□□ -1.94
SLC28A2O43868 RNU6-914P-201ENST00000516749 109 ntBASIC2.95□□□□□ -1.94
SLC28A2O43868 SNORD59.2-201ENST00000516873 68 ntBASIC2.95□□□□□ -1.94
SLC28A2O43868 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SLC28A2O43868 CASP1P1-201ENST00000526345 212 ntBASIC2.95□□□□□ -1.94
SLC28A2O43868 AC023442.1-201ENST00000531247 422 ntBASIC2.95□□□□□ -1.94
SLC28A2O43868 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC28A2O43868 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.95□□□□□ -1.94
SLC28A2O43868 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SLC28A2O43868 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.95□□□□□ -1.94
SLC28A2O43868 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SLC28A2O43868 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.95□□□□□ -1.94
SLC28A2O43868 CUL1P1-201ENST00000509510 2425 ntBASIC2.95□□□□□ -1.94
SLC28A2O43868 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.95□□□□□ -1.94
SLC28A2O43868 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SLC28A2O43868 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.95□□□□□ -1.94
SLC28A2O43868 MTND5P7-201ENST00000413558 1798 ntBASIC2.95□□□□□ -1.94
SLC28A2O43868 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
SLC28A2O43868 Y_RNA.2-201ENST00000362330 96 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 Y_RNA.80-201ENST00000362996 102 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 Y_RNA.151-201ENST00000363566 112 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 Y_RNA.153-201ENST00000363615 91 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 SNORA71.1-201ENST00000364523 117 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 RNU6-1318P-201ENST00000365389 103 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 Y_RNA.455-201ENST00000384230 98 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 Y_RNA.480-201ENST00000384364 102 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 Y_RNA.485-201ENST00000384395 102 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 Y_RNA.534-201ENST00000384599 112 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 MIR578-201ENST00000384828 96 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 RNU1-101P-201ENST00000391171 127 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.94□□□□□ -1.94
SLC28A2O43868 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.94□□□□□ -1.94
SLC28A2O43868 AL360271.2-201ENST00000447710 161 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 UQCRHP3-201ENST00000451503 251 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 RPL37P6-201ENST00000460682 294 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.94□□□□□ -1.94
SLC28A2O43868 RPS26P21-201ENST00000475397 348 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 AC015911.1-201ENST00000495111 156 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 RNA5SP385-201ENST00000515947 110 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 RN7SKP272-201ENST00000516988 232 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 SNORA31.26-201ENST00000517250 137 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.94□□□□□ -1.94
SLC28A2O43868 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.94□□□□□ -1.94
SLC28A2O43868 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.94□□□□□ -1.94
SLC28A2O43868 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.94□□□□□ -1.94
SLC28A2O43868 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.94□□□□□ -1.94
SLC28A2O43868 MIR3668-201ENST00000582138 75 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 ELOCP5-201ENST00000604924 333 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SLC28A2O43868 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.94□□□□□ -1.94
SLC28A2O43868 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SLC28A2O43868 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SLC28A2O43868 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
SLC28A2O43868 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.94□□□□□ -1.94
SLC28A2O43868 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SLC28A2O43868 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.94□□□□□ -1.94
SLC28A2O43868 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.93□□□□□ -1.94
SLC28A2O43868 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SLC28A2O43868 Y_RNA.176-201ENST00000363815 109 ntBASIC2.93□□□□□ -1.94
SLC28A2O43868 RNU1-115P-201ENST00000365329 160 ntBASIC2.93□□□□□ -1.94
SLC28A2O43868 RNU6-1329P-201ENST00000365664 107 ntBASIC2.93□□□□□ -1.94
SLC28A2O43868 SET-203ENST00000372688 801 ntTSL 2 BASIC2.93□□□□□ -1.94
SLC28A2O43868 Y_RNA.428-201ENST00000384078 102 ntBASIC2.93□□□□□ -1.94
SLC28A2O43868 SNORA70B-201ENST00000384210 135 ntBASIC2.93□□□□□ -1.94
SLC28A2O43868 SNORA46-201ENST00000384762 135 ntBASIC2.93□□□□□ -1.94
SLC28A2O43868 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SLC28A2O43868 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms