Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.16□□□□□ -1.9
PHGDHO43175 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.16□□□□□ -1.9
PHGDHO43175 AC146507.2-201ENST00000460608 476 ntBASIC3.16□□□□□ -1.9
PHGDHO43175 AC112771.1-201ENST00000463581 102 ntBASIC3.16□□□□□ -1.9
PHGDHO43175 RPL36AP48-201ENST00000485521 314 ntBASIC3.16□□□□□ -1.9
PHGDHO43175 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.16□□□□□ -1.9
PHGDHO43175 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.16□□□□□ -1.9
PHGDHO43175 MIR4429-201ENST00000580105 73 ntBASIC3.16□□□□□ -1.9
PHGDHO43175 AL356157.2-201ENST00000605122 111 ntBASIC3.16□□□□□ -1.9
PHGDHO43175 uc_338.25-201ENST00000613756 156 ntBASIC3.16□□□□□ -1.9
PHGDHO43175 AC007792.1-201ENST00000623023 402 ntBASIC3.16□□□□□ -1.9
PHGDHO43175 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
PHGDHO43175 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
PHGDHO43175 MTND5P10-201ENST00000603719 1809 ntBASIC3.16□□□□□ -1.9
PHGDHO43175 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PHGDHO43175 AL109809.4-201ENST00000603520 2185 ntBASIC3.15□□□□□ -1.9
PHGDHO43175 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
PHGDHO43175 AC002543.1-201ENST00000299783 1954 ntBASIC3.15□□□□□ -1.91
PHGDHO43175 MIR369-201ENST00000362155 70 ntBASIC3.15□□□□□ -1.91
PHGDHO43175 SNORD32A-201ENST00000364805 84 ntBASIC3.15□□□□□ -1.91
PHGDHO43175 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PHGDHO43175 RNU6-1083P-201ENST00000384022 107 ntBASIC3.15□□□□□ -1.91
PHGDHO43175 RNU6-784P-201ENST00000384330 106 ntBASIC3.15□□□□□ -1.91
PHGDHO43175 SNORA75.6-201ENST00000391318 127 ntBASIC3.15□□□□□ -1.91
PHGDHO43175 SNORA11-201ENST00000408789 128 ntBASIC3.15□□□□□ -1.91
PHGDHO43175 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.15□□□□□ -1.91
PHGDHO43175 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.15□□□□□ -1.91
PHGDHO43175 Z98742.2-201ENST00000431564 187 ntBASIC3.15□□□□□ -1.91
PHGDHO43175 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.15□□□□□ -1.91
PHGDHO43175 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.15□□□□□ -1.91
PHGDHO43175 RPL27AP5-201ENST00000469428 449 ntBASIC3.15□□□□□ -1.91
PHGDHO43175 AC091874.1-201ENST00000511402 339 ntBASIC3.15□□□□□ -1.91
PHGDHO43175 HSPE1P4-201ENST00000550617 308 ntBASIC3.15□□□□□ -1.91
PHGDHO43175 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.15□□□□□ -1.91
PHGDHO43175 BNIP3P22-201ENST00000593399 556 ntBASIC3.15□□□□□ -1.91
PHGDHO43175 AC069200.1-201ENST00000609511 323 ntBASIC3.15□□□□□ -1.91
PHGDHO43175 AC019176.2-201ENST00000611579 315 ntBASIC3.15□□□□□ -1.91
PHGDHO43175 AC090971.5-201ENST00000621102 293 ntBASIC3.15□□□□□ -1.91
PHGDHO43175 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
PHGDHO43175 MTND5P9-201ENST00000503854 1755 ntBASIC3.15□□□□□ -1.91
PHGDHO43175 AP003122.5-201ENST00000527668 3766 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PHGDHO43175 AC008264.2-201ENST00000610193 3731 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PHGDHO43175 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PHGDHO43175 AL359854.1-201ENST00000614203 1594 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 RNU6-212P-201ENST00000362642 104 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 Y_RNA.48-201ENST00000362710 103 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 SNORD50.1-201ENST00000362987 71 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 RNU6-1141P-201ENST00000364520 107 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 U3.13-201ENST00000364804 214 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 XGY1-201ENST00000381172 446 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 RNU6-474P-201ENST00000384243 107 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 Y_RNA.533-201ENST00000384596 114 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 MIR670-201ENST00000390142 98 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 RNU2-23P-201ENST00000410545 195 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 NUP35P1-201ENST00000422734 947 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 RPL23AP95-201ENST00000426806 265 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
PHGDHO43175 RPL21P10-201ENST00000463521 490 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 RPS26P21-201ENST00000475397 348 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 SEM1P1-201ENST00000506694 209 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 SNORA25.11-201ENST00000515935 105 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 IGHV3-76-201ENST00000522465 295 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 CBX3P8-201ENST00000532412 525 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 AC007375.1-201ENST00000554513 578 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.14□□□□□ -1.91
PHGDHO43175 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.14□□□□□ -1.91
PHGDHO43175 MIR4765-201ENST00000585007 77 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 AC073657.2-201ENST00000605661 303 ntBASIC3.14□□□□□ -1.91
PHGDHO43175 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PHGDHO43175 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
PHGDHO43175 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.13□□□□□ -1.91
PHGDHO43175 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.13□□□□□ -1.91
PHGDHO43175 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.13□□□□□ -1.91
PHGDHO43175 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.13□□□□□ -1.91
PHGDHO43175 RNU6-1010P-201ENST00000362757 107 ntBASIC3.13□□□□□ -1.91
PHGDHO43175 RNU1-33P-201ENST00000364249 162 ntBASIC3.13□□□□□ -1.91
PHGDHO43175 DYNLT3P1-201ENST00000378574 347 ntBASIC3.13□□□□□ -1.91
PHGDHO43175 RNU6-1227P-201ENST00000383981 107 ntBASIC3.13□□□□□ -1.91
PHGDHO43175 SNORA46-201ENST00000384762 135 ntBASIC3.13□□□□□ -1.91
PHGDHO43175 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PHGDHO43175 SNORA48.8-201ENST00000391324 134 ntBASIC3.13□□□□□ -1.91
PHGDHO43175 AC096664.2-201ENST00000411843 406 ntBASIC3.13□□□□□ -1.91
PHGDHO43175 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.13□□□□□ -1.91
PHGDHO43175 EIF1AXP1-201ENST00000419267 435 ntBASIC3.13□□□□□ -1.91
PHGDHO43175 AC244505.4-201ENST00000434905 287 ntBASIC3.13□□□□□ -1.91
PHGDHO43175 SSXP5-201ENST00000443473 287 ntBASIC3.13□□□□□ -1.91
PHGDHO43175 MIR2053-201ENST00000459295 91 ntBASIC3.13□□□□□ -1.91
PHGDHO43175 RN7SL75P-201ENST00000461926 281 ntBASIC3.13□□□□□ -1.91
PHGDHO43175 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.13□□□□□ -1.91
PHGDHO43175 RNU6-120P-201ENST00000516077 103 ntBASIC3.13□□□□□ -1.91
PHGDHO43175 SCARNA11.3-201ENST00000517276 130 ntBASIC3.13□□□□□ -1.91
PHGDHO43175 MIR92B-201ENST00000607575 96 ntBASIC3.13□□□□□ -1.91
PHGDHO43175 AC009318.2-201ENST00000610917 651 ntBASIC3.13□□□□□ -1.91
PHGDHO43175 SNORA50A-202ENST00000629536 136 ntBASIC3.13□□□□□ -1.91
PHGDHO43175 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PHGDHO43175 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PHGDHO43175 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms