Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RNA5SP59-201ENST00000410922 110 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.1□□□□□ -2.23
UBFD1O14562 OR6C66P-201ENST00000414917 930 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.1□□□□□ -2.23
UBFD1O14562 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.1□□□□□ -2.23
UBFD1O14562 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.1□□□□□ -2.23
UBFD1O14562 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 AL031313.1-201ENST00000448435 256 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 snoU109.3-201ENST00000459477 145 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 AC005908.1-201ENST00000468701 347 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 RPL30P12-201ENST00000474666 353 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 AC093852.1-201ENST00000503587 266 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 AC091951.3-201ENST00000504093 246 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.1□□□□□ -2.23
UBFD1O14562 Y_RNA.687-201ENST00000516558 91 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 RNU6-201P-201ENST00000517100 61 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 MTATP6P15-201ENST00000527233 835 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.1□□□□□ -2.23
UBFD1O14562 AP005136.1-201ENST00000579765 429 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 AC174048.1-201ENST00000603389 144 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.1□□□□□ -2.23
UBFD1O14562 AC144521.1-201ENST00000607148 956 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 AC018645.2-201ENST00000609151 472 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 AL607023.1-201ENST00000620045 248 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 AL133216.2-202ENST00000634512 349 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 HAUS6P2-201ENST00000433254 2404 ntBASIC1.1□□□□□ -2.23
UBFD1O14562 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.1□□□□□ -2.23
UBFD1O14562 AL445523.1-201ENST00000451184 1362 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 RNU6-212P-201ENST00000362642 104 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 Y_RNA.302-201ENST00000364997 102 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 RNU6-487P-201ENST00000365430 104 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
UBFD1O14562 RNU6-338P-201ENST00000383888 105 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 RNU6-83P-201ENST00000384568 112 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 MIR578-201ENST00000384828 96 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 RNU2-23P-201ENST00000410545 195 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
UBFD1O14562 MTCO2P21-201ENST00000419780 677 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 AL353777.1-201ENST00000425552 326 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 CALM2P2-201ENST00000428512 440 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 AL627311.1-201ENST00000431514 115 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 AL365400.1-201ENST00000431854 640 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 HMGN2P18-201ENST00000450680 270 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 AC012308.1-201ENST00000451232 178 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.09□□□□□ -2.23
UBFD1O14562 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.09□□□□□ -2.23
UBFD1O14562 COX6CP14-201ENST00000469580 174 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.09□□□□□ -2.23
UBFD1O14562 AC093259.1-201ENST00000509755 300 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 AC009646.1-201ENST00000510455 318 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 AC116347.2-201ENST00000514912 523 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 AC105185.1-201ENST00000518705 535 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 AC022616.6-201ENST00000520479 119 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.09□□□□□ -2.23
UBFD1O14562 AC008015.1-201ENST00000555505 465 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.09□□□□□ -2.23
UBFD1O14562 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.09□□□□□ -2.23
UBFD1O14562 AC010900.2-201ENST00000604508 210 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 AL158032.1-201ENST00000605401 106 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 AL022345.1-201ENST00000607292 135 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 FRG1KP-201ENST00000623592 341 ntBASIC1.09□□□□□ -2.23
UBFD1O14562 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.09□□□□□ -2.23
UBFD1O14562 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
UBFD1O14562 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
UBFD1O14562 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
UBFD1O14562 MIR412-201ENST00000362142 91 ntBASIC1.08□□□□□ -2.24
UBFD1O14562 RNU6-1210P-201ENST00000363775 107 ntBASIC1.08□□□□□ -2.24
UBFD1O14562 RNU6-931P-201ENST00000363850 107 ntBASIC1.08□□□□□ -2.24
UBFD1O14562 RNU6-809P-201ENST00000384461 107 ntBASIC1.08□□□□□ -2.24
UBFD1O14562 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.08□□□□□ -2.24
UBFD1O14562 SRIP3-201ENST00000413200 219 ntBASIC1.08□□□□□ -2.24
UBFD1O14562 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.08□□□□□ -2.24
UBFD1O14562 MTCYBP5-201ENST00000423752 1135 ntBASIC1.08□□□□□ -2.24
UBFD1O14562 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.08□□□□□ -2.24
UBFD1O14562 USP9YP18-201ENST00000425912 695 ntBASIC1.08□□□□□ -2.24
UBFD1O14562 KATNBL1P3-201ENST00000443475 909 ntBASIC1.08□□□□□ -2.24
UBFD1O14562 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.08□□□□□ -2.24
UBFD1O14562 RPS4XP11-201ENST00000446897 772 ntBASIC1.08□□□□□ -2.24
UBFD1O14562 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.08□□□□□ -2.24
UBFD1O14562 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.08□□□□□ -2.24
UBFD1O14562 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.08□□□□□ -2.24
UBFD1O14562 RNU2-10P-201ENST00000516375 211 ntBASIC1.08□□□□□ -2.24
UBFD1O14562 SNORA43.2-201ENST00000516652 128 ntBASIC1.08□□□□□ -2.24
UBFD1O14562 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
UBFD1O14562 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.07□□□□□ -2.24
UBFD1O14562 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
UBFD1O14562 MIR26B-201ENST00000362251 77 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 SNORD56.1-201ENST00000362913 68 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 SNORD114-6-201ENST00000364393 72 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 RNU6-660P-201ENST00000364566 109 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 RNU4-91P-201ENST00000364778 135 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
UBFD1O14562 RNU6-939P-201ENST00000384634 107 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 MIR30A-201ENST00000385092 71 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
UBFD1O14562 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 187.9 ms