Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.22□□□□□ -1.73
SOX1O00570 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SOX1O00570 DHX9P1-201ENST00000436565 3076 ntBASIC4.22□□□□□ -1.73
SOX1O00570 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.22□□□□□ -1.73
SOX1O00570 SNORD115-8-201ENST00000363856 82 ntBASIC4.22□□□□□ -1.73
SOX1O00570 SNORA80A-201ENST00000363922 136 ntBASIC4.22□□□□□ -1.73
SOX1O00570 RNU1-33P-201ENST00000364249 162 ntBASIC4.22□□□□□ -1.73
SOX1O00570 SNORD115-38-201ENST00000365037 82 ntBASIC4.22□□□□□ -1.73
SOX1O00570 Y_RNA.331-201ENST00000365267 102 ntBASIC4.22□□□□□ -1.73
SOX1O00570 U3.15-201ENST00000365398 212 ntBASIC4.22□□□□□ -1.73
SOX1O00570 RNU6-1197P-201ENST00000391183 107 ntBASIC4.22□□□□□ -1.73
SOX1O00570 RPL26P27-201ENST00000414397 437 ntBASIC4.22□□□□□ -1.73
SOX1O00570 AC074117.2-201ENST00000417130 397 ntBASIC4.22□□□□□ -1.73
SOX1O00570 COTL1P1-201ENST00000422309 375 ntBASIC4.22□□□□□ -1.73
SOX1O00570 AC017083.1-201ENST00000428093 483 ntBASIC4.22□□□□□ -1.73
SOX1O00570 SETP5-201ENST00000437270 562 ntBASIC4.22□□□□□ -1.73
SOX1O00570 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC4.22□□□□□ -1.73
SOX1O00570 RPL21P10-201ENST00000463521 490 ntBASIC4.22□□□□□ -1.73
SOX1O00570 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.22□□□□□ -1.73
SOX1O00570 RNU6-1073P-201ENST00000517182 106 ntBASIC4.22□□□□□ -1.73
SOX1O00570 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.22□□□□□ -1.73
SOX1O00570 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SOX1O00570 MIR5187-201ENST00000583479 76 ntBASIC4.22□□□□□ -1.73
SOX1O00570 AC020895.1-201ENST00000595362 272 ntBASIC4.22□□□□□ -1.73
SOX1O00570 KLKP1-201ENST00000595979 403 ntBASIC4.22□□□□□ -1.73
SOX1O00570 AC005176.2-201ENST00000596933 147 ntBASIC4.22□□□□□ -1.73
SOX1O00570 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.22□□□□□ -1.73
SOX1O00570 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.22□□□□□ -1.73
SOX1O00570 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SOX1O00570 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX1O00570 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX1O00570 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SOX1O00570 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX1O00570 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX1O00570 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SOX1O00570 AC092435.4-201ENST00000623012 4159 ntBASIC4.21□□□□□ -1.73
SOX1O00570 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.73
SOX1O00570 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
SOX1O00570 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX1O00570 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
SOX1O00570 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.21□□□□□ -1.74
SOX1O00570 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX1O00570 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
SOX1O00570 RNU1-108P-201ENST00000362556 161 ntBASIC4.21□□□□□ -1.74
SOX1O00570 SNORD56.1-201ENST00000362913 68 ntBASIC4.21□□□□□ -1.74
SOX1O00570 RNU6-778P-201ENST00000363269 103 ntBASIC4.21□□□□□ -1.74
SOX1O00570 Y_RNA.308-201ENST00000365043 101 ntBASIC4.21□□□□□ -1.74
SOX1O00570 Y_RNA.398-201ENST00000383952 99 ntBASIC4.21□□□□□ -1.74
SOX1O00570 RNU6-217P-201ENST00000384164 104 ntBASIC4.21□□□□□ -1.74
SOX1O00570 MIR1271-201ENST00000408537 86 ntBASIC4.21□□□□□ -1.74
SOX1O00570 RNU6-1135P-201ENST00000411083 103 ntBASIC4.21□□□□□ -1.74
SOX1O00570 ATP5A1P2-201ENST00000412323 255 ntBASIC4.21□□□□□ -1.74
SOX1O00570 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX1O00570 Z74021.1-201ENST00000423610 407 ntBASIC4.21□□□□□ -1.74
SOX1O00570 AC007969.2-201ENST00000441891 191 ntBASIC4.21□□□□□ -1.74
SOX1O00570 GPM6BP3-201ENST00000442797 145 ntBASIC4.21□□□□□ -1.74
SOX1O00570 MRPS10P1-201ENST00000448483 130 ntBASIC4.21□□□□□ -1.74
SOX1O00570 AC108751.2-201ENST00000469993 231 ntBASIC4.21□□□□□ -1.74
SOX1O00570 AC016632.1-201ENST00000503994 196 ntBASIC4.21□□□□□ -1.74
SOX1O00570 RNA5SP446-201ENST00000515955 82 ntBASIC4.21□□□□□ -1.74
SOX1O00570 RNY3P16-201ENST00000516338 101 ntBASIC4.21□□□□□ -1.74
SOX1O00570 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
SOX1O00570 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.21□□□□□ -1.74
SOX1O00570 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SOX1O00570 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX1O00570 RPL23AP97-201ENST00000568955 471 ntBASIC4.21□□□□□ -1.74
SOX1O00570 MIR4325-201ENST00000583049 90 ntBASIC4.21□□□□□ -1.74
SOX1O00570 AC019159.1-201ENST00000605094 187 ntBASIC4.21□□□□□ -1.74
SOX1O00570 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX1O00570 AC018529.3-201ENST00000624212 2254 ntBASIC4.21□□□□□ -1.74
SOX1O00570 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SOX1O00570 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SOX1O00570 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
SOX1O00570 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SOX1O00570 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.2□□□□□ -1.74
SOX1O00570 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.2□□□□□ -1.74
SOX1O00570 SNORD50B-201ENST00000364995 70 ntBASIC4.2□□□□□ -1.74
SOX1O00570 RNU1-73P-201ENST00000383971 164 ntBASIC4.2□□□□□ -1.74
SOX1O00570 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.2□□□□□ -1.74
SOX1O00570 HMGN2P21-201ENST00000447764 270 ntBASIC4.2□□□□□ -1.74
SOX1O00570 UQCRBP2-201ENST00000447827 297 ntBASIC4.2□□□□□ -1.74
SOX1O00570 AC125238.1-201ENST00000448842 249 ntBASIC4.2□□□□□ -1.74
SOX1O00570 RPL30P5-201ENST00000494923 336 ntBASIC4.2□□□□□ -1.74
SOX1O00570 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.2□□□□□ -1.74
SOX1O00570 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.2□□□□□ -1.74
SOX1O00570 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.2□□□□□ -1.74
SOX1O00570 AL451007.1-201ENST00000595491 289 ntBASIC4.2□□□□□ -1.74
SOX1O00570 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.2□□□□□ -1.74
SOX1O00570 MIR6134-201ENST00000617606 109 ntBASIC4.2□□□□□ -1.74
SOX1O00570 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.2□□□□□ -1.74
SOX1O00570 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SOX1O00570 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.2□□□□□ -1.74
SOX1O00570 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SOX1O00570 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SOX1O00570 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SOX1O00570 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SOX1O00570 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SOX1O00570 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.19□□□□□ -1.74
SOX1O00570 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SOX1O00570 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms