Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SLC28A1O00337 AL353193.1-201ENST00000421444 268 ntBASIC2.09□□□□□ -2.07
SLC28A1O00337 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
SLC28A1O00337 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.09□□□□□ -2.07
SLC28A1O00337 RNU7-180P-201ENST00000459240 63 ntBASIC2.09□□□□□ -2.07
SLC28A1O00337 AL163973.1-201ENST00000484753 577 ntBASIC2.09□□□□□ -2.07
SLC28A1O00337 RPL30P1-201ENST00000488676 339 ntBASIC2.09□□□□□ -2.07
SLC28A1O00337 AC090255.1-201ENST00000495779 349 ntBASIC2.09□□□□□ -2.07
SLC28A1O00337 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.09□□□□□ -2.07
SLC28A1O00337 MTND2P33-201ENST00000506452 1031 ntBASIC2.09□□□□□ -2.07
SLC28A1O00337 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.09□□□□□ -2.07
SLC28A1O00337 RN7SKP256-201ENST00000517201 314 ntBASIC2.09□□□□□ -2.07
SLC28A1O00337 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.09□□□□□ -2.07
SLC28A1O00337 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.09□□□□□ -2.07
SLC28A1O00337 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.09□□□□□ -2.07
SLC28A1O00337 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.09□□□□□ -2.07
SLC28A1O00337 AP000763.2-201ENST00000540641 163 ntBASIC2.09□□□□□ -2.07
SLC28A1O00337 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.09□□□□□ -2.07
SLC28A1O00337 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.09□□□□□ -2.07
SLC28A1O00337 AC009063.1-201ENST00000563342 702 ntBASIC2.09□□□□□ -2.07
SLC28A1O00337 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.09□□□□□ -2.07
SLC28A1O00337 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.09□□□□□ -2.07
SLC28A1O00337 MTND1P15-201ENST00000579262 949 ntBASIC2.09□□□□□ -2.07
SLC28A1O00337 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.09□□□□□ -2.07
SLC28A1O00337 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.09□□□□□ -2.07
SLC28A1O00337 MIR6840-201ENST00000611937 71 ntBASIC2.09□□□□□ -2.07
SLC28A1O00337 uc_338.34-201ENST00000617467 174 ntBASIC2.09□□□□□ -2.07
SLC28A1O00337 MIR203B-201ENST00000636080 86 ntBASIC2.09□□□□□ -2.07
SLC28A1O00337 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SLC28A1O00337 AP006437.1-201ENST00000641440 3685 ntBASIC2.08□□□□□ -2.08
SLC28A1O00337 AL663109.1-201ENST00000411498 844 ntBASIC2.08□□□□□ -2.08
SLC28A1O00337 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.08□□□□□ -2.08
SLC28A1O00337 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.08□□□□□ -2.08
SLC28A1O00337 MTND2P22-201ENST00000444325 1033 ntBASIC2.08□□□□□ -2.08
SLC28A1O00337 Z83846.1-201ENST00000446798 265 ntBASIC2.08□□□□□ -2.08
SLC28A1O00337 AL031274.1-201ENST00000450334 232 ntBASIC2.08□□□□□ -2.08
SLC28A1O00337 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.08□□□□□ -2.08
SLC28A1O00337 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.08□□□□□ -2.08
SLC28A1O00337 AL353752.1-201ENST00000454946 260 ntBASIC2.08□□□□□ -2.08
SLC28A1O00337 AL122001.1-201ENST00000457027 370 ntBASIC2.08□□□□□ -2.08
SLC28A1O00337 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.08□□□□□ -2.08
SLC28A1O00337 RNU6-405P-201ENST00000516637 110 ntBASIC2.08□□□□□ -2.08
SLC28A1O00337 RNA5SP137-201ENST00000516833 135 ntBASIC2.08□□□□□ -2.08
SLC28A1O00337 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.08□□□□□ -2.08
SLC28A1O00337 MTND4P7-201ENST00000523876 130 ntBASIC2.08□□□□□ -2.08
SLC28A1O00337 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.08□□□□□ -2.08
SLC28A1O00337 AP003392.2-201ENST00000527269 208 ntBASIC2.08□□□□□ -2.08
SLC28A1O00337 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.08□□□□□ -2.08
SLC28A1O00337 AC087683.1-201ENST00000591187 441 ntBASIC2.08□□□□□ -2.08
SLC28A1O00337 AL031274.2-201ENST00000599419 203 ntBASIC2.08□□□□□ -2.08
SLC28A1O00337 APOOP1-201ENST00000604695 592 ntBASIC2.08□□□□□ -2.08
SLC28A1O00337 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SLC28A1O00337 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.08□□□□□ -2.08
SLC28A1O00337 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.07□□□□□ -2.08
SLC28A1O00337 snoU2_19.1-201ENST00000362361 80 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 RNU6-428P-201ENST00000362942 107 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 Y_RNA.255-201ENST00000364581 97 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 RNU6-336P-201ENST00000364891 107 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 Y_RNA.381-201ENST00000365666 102 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
SLC28A1O00337 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SLC28A1O00337 RNU4-52P-201ENST00000384209 138 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 AL606923.1-201ENST00000406616 190 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 RNU2-32P-201ENST00000411193 191 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 RNU6-293P-201ENST00000411259 106 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SLC28A1O00337 USP9YP18-201ENST00000425912 695 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.07□□□□□ -2.08
SLC28A1O00337 AL606489.2-201ENST00000433886 234 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 MTCO2P18-201ENST00000457151 658 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 AL049873.1-201ENST00000480540 376 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.07□□□□□ -2.08
SLC28A1O00337 SNORA40.12-201ENST00000516329 111 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 RNU1-40P-201ENST00000516816 164 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 RNU1-97P-201ENST00000516872 164 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 SNORA31.25-201ENST00000517242 134 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 AC115990.1-201ENST00000526957 301 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 AP003034.1-201ENST00000534621 422 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 NDUFA5P6-201ENST00000542110 379 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.07□□□□□ -2.08
SLC28A1O00337 AC026271.5-201ENST00000577873 130 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 MIR5002-201ENST00000584713 97 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 BNIP3P16-201ENST00000589779 534 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 AC107304.1-201ENST00000604229 296 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 AC022202.1-201ENST00000613515 211 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 AC243829.7-201ENST00000633081 225 ntBASIC2.07□□□□□ -2.08
SLC28A1O00337 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.07□□□□□ -2.08
SLC28A1O00337 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
SLC28A1O00337 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SLC28A1O00337 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
SLC28A1O00337 RNU6-546P-201ENST00000383991 107 ntBASIC2.06□□□□□ -2.08
SLC28A1O00337 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
SLC28A1O00337 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.06□□□□□ -2.08
SLC28A1O00337 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.06□□□□□ -2.08
SLC28A1O00337 AL590556.1-201ENST00000423231 483 ntBASIC2.06□□□□□ -2.08
SLC28A1O00337 HMGN2P38-201ENST00000423806 265 ntBASIC2.06□□□□□ -2.08
SLC28A1O00337 VN1R108P-201ENST00000431580 830 ntBASIC2.06□□□□□ -2.08
SLC28A1O00337 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.06□□□□□ -2.08
SLC28A1O00337 AC243964.1-201ENST00000441814 261 ntBASIC2.06□□□□□ -2.08
SLC28A1O00337 MTND1P29-201ENST00000448112 647 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms