Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.31□□□□□ -2.2
UPK1AO00322 RMST_6.1-201ENST00000611980 203 ntBASIC1.31□□□□□ -2.2
UPK1AO00322 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.31□□□□□ -2.2
UPK1AO00322 AC027807.2-201ENST00000616099 408 ntBASIC1.31□□□□□ -2.2
UPK1AO00322 AC092140.2-201ENST00000618027 521 ntBASIC1.31□□□□□ -2.2
UPK1AO00322 AC009878.1-201ENST00000621819 340 ntBASIC1.31□□□□□ -2.2
UPK1AO00322 AC019226.2-201ENST00000625973 424 ntBASIC1.31□□□□□ -2.2
UPK1AO00322 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
UPK1AO00322 Y_RNA.99-201ENST00000363138 105 ntBASIC1.3□□□□□ -2.2
UPK1AO00322 RNU6-1164P-201ENST00000364428 107 ntBASIC1.3□□□□□ -2.2
UPK1AO00322 RNU5E-7P-201ENST00000365290 117 ntBASIC1.3□□□□□ -2.2
UPK1AO00322 CBX3P6-201ENST00000430257 527 ntBASIC1.3□□□□□ -2.2
UPK1AO00322 AL591043.1-201ENST00000432461 424 ntBASIC1.3□□□□□ -2.2
UPK1AO00322 RPS15AP10-201ENST00000432472 382 ntBASIC1.3□□□□□ -2.2
UPK1AO00322 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.3□□□□□ -2.2
UPK1AO00322 USP9YP12-201ENST00000450481 570 ntBASIC1.3□□□□□ -2.2
UPK1AO00322 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.3□□□□□ -2.2
UPK1AO00322 AC087884.1-201ENST00000469738 328 ntBASIC1.3□□□□□ -2.2
UPK1AO00322 RPL30P6-201ENST00000475925 342 ntBASIC1.3□□□□□ -2.2
UPK1AO00322 AC108210.2-201ENST00000503681 201 ntBASIC1.3□□□□□ -2.2
UPK1AO00322 RBBP4P6-201ENST00000508098 202 ntBASIC1.3□□□□□ -2.2
UPK1AO00322 RNU6-991P-201ENST00000516168 107 ntBASIC1.3□□□□□ -2.2
UPK1AO00322 SNORA44.1-201ENST00000517031 108 ntBASIC1.3□□□□□ -2.2
UPK1AO00322 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.3□□□□□ -2.2
UPK1AO00322 AC137800.2-201ENST00000574375 120 ntBASIC1.3□□□□□ -2.2
UPK1AO00322 AC091135.1-201ENST00000585943 307 ntBASIC1.3□□□□□ -2.2
UPK1AO00322 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.3□□□□□ -2.2
UPK1AO00322 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
UPK1AO00322 RNU6-179P-201ENST00000363350 107 ntBASIC1.29□□□□□ -2.2
UPK1AO00322 U8.10-201ENST00000384260 133 ntBASIC1.29□□□□□ -2.2
UPK1AO00322 MIR758-201ENST00000390227 88 ntBASIC1.29□□□□□ -2.2
UPK1AO00322 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.29□□□□□ -2.2
UPK1AO00322 RNU6-387P-201ENST00000411331 105 ntBASIC1.29□□□□□ -2.2
UPK1AO00322 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.29□□□□□ -2.2
UPK1AO00322 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.29□□□□□ -2.2
UPK1AO00322 HSPE1P24-201ENST00000450782 238 ntBASIC1.29□□□□□ -2.2
UPK1AO00322 MTND2P14-201ENST00000482139 351 ntBASIC1.29□□□□□ -2.2
UPK1AO00322 MTCYBP40-201ENST00000509390 1135 ntBASIC1.29□□□□□ -2.2
UPK1AO00322 AC093259.1-201ENST00000509755 300 ntBASIC1.29□□□□□ -2.2
UPK1AO00322 AC008834.1-201ENST00000511612 175 ntBASIC1.29□□□□□ -2.2
UPK1AO00322 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.29□□□□□ -2.2
UPK1AO00322 Y_RNA.672-201ENST00000516289 104 ntBASIC1.29□□□□□ -2.2
UPK1AO00322 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.29□□□□□ -2.2
UPK1AO00322 MTND2P7-201ENST00000521337 640 ntBASIC1.29□□□□□ -2.2
UPK1AO00322 AP002453.2-201ENST00000533503 320 ntBASIC1.29□□□□□ -2.2
UPK1AO00322 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
UPK1AO00322 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.29□□□□□ -2.2
UPK1AO00322 AC022254.1-201ENST00000567857 235 ntBASIC1.29□□□□□ -2.2
UPK1AO00322 MIR4298-201ENST00000584380 73 ntBASIC1.29□□□□□ -2.2
UPK1AO00322 AC008521.1-201ENST00000587471 187 ntBASIC1.29□□□□□ -2.2
UPK1AO00322 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.29□□□□□ -2.2
UPK1AO00322 AC025754.2-201ENST00000606491 432 ntBASIC1.29□□□□□ -2.2
UPK1AO00322 AC016597.2-201ENST00000613256 341 ntBASIC1.29□□□□□ -2.2
UPK1AO00322 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.29□□□□□ -2.2
UPK1AO00322 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.29□□□□□ -2.2
UPK1AO00322 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
UPK1AO00322 RNU6-500P-201ENST00000362349 107 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 RNU6-78P-201ENST00000362897 107 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 RNU6-371P-201ENST00000364283 108 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 RNU5E-5P-201ENST00000365379 116 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 RNU6-1245P-201ENST00000411130 106 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 EEF1A1P40-201ENST00000412883 573 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 AL031779.1-201ENST00000415663 330 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
UPK1AO00322 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.28□□□□□ -2.2
UPK1AO00322 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.28□□□□□ -2.2
UPK1AO00322 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.28□□□□□ -2.2
UPK1AO00322 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.28□□□□□ -2.2
UPK1AO00322 AL122001.1-201ENST00000457027 370 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.28□□□□□ -2.2
UPK1AO00322 MTCO3P9-201ENST00000506989 781 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.28□□□□□ -2.2
UPK1AO00322 RNU1-86P-201ENST00000516108 154 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 RNU1-107P-201ENST00000516617 154 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 AP005597.4-201ENST00000526762 229 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 MIR3198-2-201ENST00000577868 80 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 HMGN1P30-201ENST00000589286 268 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 WISP1-OT1-201ENST00000602893 642 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 AL136363.2-201ENST00000604173 851 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 AC112191.3-201ENST00000604371 277 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 AC138749.5-201ENST00000611461 208 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 AC116165.2-201ENST00000616705 206 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 AL159153.1-201ENST00000619688 317 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 AC022960.3-201ENST00000619794 441 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 AC130454.1-201ENST00000622948 401 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.28□□□□□ -2.2
UPK1AO00322 AL359740.1-201ENST00000624340 592 ntBASIC1.28□□□□□ -2.2
UPK1AO00322 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
UPK1AO00322 AC245060.5-201ENST00000610778 3293 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.27□□□□□ -2.21
UPK1AO00322 ZNF72P-201ENST00000425869 1908 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 RNU6-661P-201ENST00000362409 107 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 RNU6-23P-201ENST00000363283 107 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 RNU6-61P-201ENST00000365528 109 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 SNORA20.2-201ENST00000383922 131 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 RNU6-160P-201ENST00000384591 107 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 RPL23AP32-201ENST00000395315 459 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 AC009310.1-201ENST00000414414 451 ntBASIC1.27□□□□□ -2.21
UPK1AO00322 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.27□□□□□ -2.21
UPK1AO00322 MTCO3P46-201ENST00000425787 232 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms