Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.82□□□□□ -1.8
RFXAPO00287 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RFXAPO00287 RNU6-927P-201ENST00000516199 100 ntBASIC3.82□□□□□ -1.8
RFXAPO00287 Y_RNA.679-201ENST00000516416 91 ntBASIC3.82□□□□□ -1.8
RFXAPO00287 RN7SKP272-201ENST00000516988 232 ntBASIC3.82□□□□□ -1.8
RFXAPO00287 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.82□□□□□ -1.8
RFXAPO00287 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RFXAPO00287 AC090617.3-201ENST00000573670 475 ntBASIC3.82□□□□□ -1.8
RFXAPO00287 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.82□□□□□ -1.8
RFXAPO00287 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.82□□□□□ -1.8
RFXAPO00287 AL033523.1-201ENST00000605153 153 ntBASIC3.82□□□□□ -1.8
RFXAPO00287 AC005046.1-201ENST00000608515 625 ntBASIC3.82□□□□□ -1.8
RFXAPO00287 AP000553.6-201ENST00000641242 118 ntBASIC3.82□□□□□ -1.8
RFXAPO00287 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RFXAPO00287 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
RFXAPO00287 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
RFXAPO00287 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RFXAPO00287 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RFXAPO00287 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.81□□□□□ -1.8
RFXAPO00287 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.81□□□□□ -1.8
RFXAPO00287 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.81□□□□□ -1.8
RFXAPO00287 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RFXAPO00287 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RFXAPO00287 Y_RNA.82-201ENST00000363000 102 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 Y_RNA.92-201ENST00000363043 102 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 Y_RNA.235-201ENST00000364412 102 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 Y_RNA.306-201ENST00000365015 102 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 Y_RNA.308-201ENST00000365043 101 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 Y_RNA.312-201ENST00000365089 102 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 RNA5SP126-201ENST00000365092 109 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 Y_RNA.322-201ENST00000365151 102 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 RNU6-326P-201ENST00000365480 107 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 Y_RNA.446-201ENST00000384178 104 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 RN7SKP284-201ENST00000411002 343 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 BMS1P22-201ENST00000414726 313 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.81□□□□□ -1.8
RFXAPO00287 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 AC025750.2-201ENST00000442609 450 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 Z75741.1-201ENST00000446793 314 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.81□□□□□ -1.8
RFXAPO00287 Y_RNA.650-201ENST00000459002 102 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 Y_RNA.638-201ENST00000459374 113 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 RPS26P15-201ENST00000488067 348 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 AL049874.1-201ENST00000489560 388 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 AC091959.1-201ENST00000495857 238 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.81□□□□□ -1.8
RFXAPO00287 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.81□□□□□ -1.8
RFXAPO00287 RNA5SP272-201ENST00000516095 111 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 RNU6-479P-201ENST00000516348 105 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 Y_RNA.777-201ENST00000516982 102 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 IGKV2-26-201ENST00000518305 343 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.81□□□□□ -1.8
RFXAPO00287 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RFXAPO00287 AC027288.2-201ENST00000553028 243 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 Y_RNA.771-201ENST00000598668 102 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 AC008121.1-201ENST00000603244 268 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.81□□□□□ -1.8
RFXAPO00287 Y_RNA.789-201ENST00000622480 102 ntBASIC3.81□□□□□ -1.8
RFXAPO00287 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RFXAPO00287 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.81□□□□□ -1.8
RFXAPO00287 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RFXAPO00287 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RFXAPO00287 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RFXAPO00287 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.8□□□□□ -1.8
RFXAPO00287 AC018555.1-201ENST00000567548 1980 ntBASIC3.8□□□□□ -1.8
RFXAPO00287 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.8□□□□□ -1.8
RFXAPO00287 AL079305.1-201ENST00000623159 3008 ntBASIC3.8□□□□□ -1.8
RFXAPO00287 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.8□□□□□ -1.8
RFXAPO00287 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.8□□□□□ -1.8
RFXAPO00287 RNU6-1167P-201ENST00000363227 94 ntBASIC3.8□□□□□ -1.8
RFXAPO00287 SNORD63-201ENST00000384262 68 ntBASIC3.8□□□□□ -1.8
RFXAPO00287 MIR10A-201ENST00000385043 110 ntBASIC3.8□□□□□ -1.8
RFXAPO00287 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.8□□□□□ -1.8
RFXAPO00287 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.8□□□□□ -1.8
RFXAPO00287 PIGFP3-201ENST00000441918 722 ntBASIC3.8□□□□□ -1.8
RFXAPO00287 MRPS10P1-201ENST00000448483 130 ntBASIC3.8□□□□□ -1.8
RFXAPO00287 AL049830.2-201ENST00000480072 201 ntBASIC3.8□□□□□ -1.8
RFXAPO00287 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.8□□□□□ -1.8
RFXAPO00287 RNU7-175P-201ENST00000515915 61 ntBASIC3.8□□□□□ -1.8
RFXAPO00287 RNU6-313P-201ENST00000516317 112 ntBASIC3.8□□□□□ -1.8
RFXAPO00287 RN7SKP234-201ENST00000517173 224 ntBASIC3.8□□□□□ -1.8
RFXAPO00287 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.8□□□□□ -1.8
RFXAPO00287 AC020914.4-201ENST00000597690 277 ntBASIC3.8□□□□□ -1.8
RFXAPO00287 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.8□□□□□ -1.8
RFXAPO00287 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFXAPO00287 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.8□□□□□ -1.8
RFXAPO00287 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFXAPO00287 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFXAPO00287 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.8□□□□□ -1.8
RFXAPO00287 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.8□□□□□ -1.8
RFXAPO00287 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFXAPO00287 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.8□□□□□ -1.8
RFXAPO00287 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFXAPO00287 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.8□□□□□ -1.8
RFXAPO00287 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RFXAPO00287 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
RFXAPO00287 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RFXAPO00287 OR4G2P-202ENST00000641004 1759 ntBASIC3.79□□□□□ -1.8
RFXAPO00287 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms