Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC188H7C350 WARS2P1-201ENST00000429678 537 ntBASIC2.37□□□□□ -2.03
CCDC188H7C350 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC188H7C350 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC188H7C350 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC188H7C350 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC188H7C350 AC117503.1-201ENST00000472241 394 ntBASIC2.37□□□□□ -2.03
CCDC188H7C350 MTCYBP40-201ENST00000509390 1135 ntBASIC2.37□□□□□ -2.03
CCDC188H7C350 RNA5SP24-201ENST00000516478 95 ntBASIC2.37□□□□□ -2.03
CCDC188H7C350 RNA5SP82-201ENST00000516707 92 ntBASIC2.37□□□□□ -2.03
CCDC188H7C350 AC021269.2-201ENST00000532318 330 ntBASIC2.37□□□□□ -2.03
CCDC188H7C350 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC188H7C350 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC188H7C350 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC188H7C350 RNU6-85P-201ENST00000605989 107 ntBASIC2.37□□□□□ -2.03
CCDC188H7C350 SNORD14A-201ENST00000606526 91 ntBASIC2.37□□□□□ -2.03
CCDC188H7C350 AC004492.1-201ENST00000607036 742 ntBASIC2.37□□□□□ -2.03
CCDC188H7C350 AP001330.5-201ENST00000607176 411 ntBASIC2.37□□□□□ -2.03
CCDC188H7C350 AC017083.3-201ENST00000609955 700 ntBASIC2.37□□□□□ -2.03
CCDC188H7C350 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC188H7C350 AL136360.1-201ENST00000503377 1900 ntBASIC2.36□□□□□ -2.03
CCDC188H7C350 RNU1-72P-201ENST00000362976 153 ntBASIC2.36□□□□□ -2.03
CCDC188H7C350 SNORA69-201ENST00000383895 132 ntBASIC2.36□□□□□ -2.03
CCDC188H7C350 Y_RNA.399-201ENST00000383955 105 ntBASIC2.36□□□□□ -2.03
CCDC188H7C350 RNU6-293P-201ENST00000411259 106 ntBASIC2.36□□□□□ -2.03
CCDC188H7C350 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC188H7C350 SNORD56-201ENST00000413522 71 ntBASIC2.36□□□□□ -2.03
CCDC188H7C350 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC188H7C350 DLGAP5P1-201ENST00000430307 464 ntBASIC2.36□□□□□ -2.03
CCDC188H7C350 RPL32P28-201ENST00000443577 397 ntBASIC2.36□□□□□ -2.03
CCDC188H7C350 MTND1P1-201ENST00000445453 368 ntBASIC2.36□□□□□ -2.03
CCDC188H7C350 PSPHP1-201ENST00000450062 261 ntBASIC2.36□□□□□ -2.03
CCDC188H7C350 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC188H7C350 AC083798.1-201ENST00000472671 131 ntBASIC2.36□□□□□ -2.03
CCDC188H7C350 AL121594.1-201ENST00000475906 575 ntBASIC2.36□□□□□ -2.03
CCDC188H7C350 SNORA25.17-201ENST00000517184 124 ntBASIC2.36□□□□□ -2.03
CCDC188H7C350 AC104383.1-201ENST00000530297 370 ntBASIC2.36□□□□□ -2.03
CCDC188H7C350 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.36□□□□□ -2.03
CCDC188H7C350 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.36□□□□□ -2.03
CCDC188H7C350 AL512360.1-201ENST00000555346 234 ntBASIC2.36□□□□□ -2.03
CCDC188H7C350 AL138976.2-201ENST00000563989 694 ntBASIC2.36□□□□□ -2.03
CCDC188H7C350 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.36□□□□□ -2.03
CCDC188H7C350 APOOP1-201ENST00000604695 592 ntBASIC2.36□□□□□ -2.03
CCDC188H7C350 AL359880.1-201ENST00000621879 266 ntBASIC2.36□□□□□ -2.03
CCDC188H7C350 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.36□□□□□ -2.03
CCDC188H7C350 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC188H7C350 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC188H7C350 snoU2_19.1-201ENST00000362361 80 ntBASIC2.35□□□□□ -2.03
CCDC188H7C350 RNU6-428P-201ENST00000362942 107 ntBASIC2.35□□□□□ -2.03
CCDC188H7C350 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC188H7C350 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC188H7C350 RNA5SP270-201ENST00000411361 118 ntBASIC2.35□□□□□ -2.03
CCDC188H7C350 AL139413.1-201ENST00000421309 217 ntBASIC2.35□□□□□ -2.03
CCDC188H7C350 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC188H7C350 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC188H7C350 TPTE2P5-203ENST00000458118 728 ntBASIC2.35□□□□□ -2.03
CCDC188H7C350 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC188H7C350 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC188H7C350 RNU6-1038P-201ENST00000516516 104 ntBASIC2.35□□□□□ -2.03
CCDC188H7C350 RNU6-314P-201ENST00000516574 104 ntBASIC2.35□□□□□ -2.03
CCDC188H7C350 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.35□□□□□ -2.03
CCDC188H7C350 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.35□□□□□ -2.03
CCDC188H7C350 MIR4319-201ENST00000577285 85 ntBASIC2.35□□□□□ -2.03
CCDC188H7C350 AC091135.1-201ENST00000585943 307 ntBASIC2.35□□□□□ -2.03
CCDC188H7C350 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC188H7C350 AC092747.3-201ENST00000603769 301 ntBASIC2.35□□□□□ -2.03
CCDC188H7C350 AC004908.3-201ENST00000610248 625 ntBASIC2.35□□□□□ -2.03
CCDC188H7C350 AC068792.1-201ENST00000621354 417 ntBASIC2.35□□□□□ -2.03
CCDC188H7C350 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC188H7C350 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CCDC188H7C350 RNU6-529P-201ENST00000363383 104 ntBASIC2.34□□□□□ -2.03
CCDC188H7C350 RNU6-827P-201ENST00000365553 106 ntBASIC2.34□□□□□ -2.03
CCDC188H7C350 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC188H7C350 MIR561-201ENST00000385216 97 ntBASIC2.34□□□□□ -2.03
CCDC188H7C350 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC188H7C350 MTCO3P41-201ENST00000414801 328 ntBASIC2.34□□□□□ -2.03
CCDC188H7C350 AIMP1P2-201ENST00000425294 312 ntBASIC2.34□□□□□ -2.03
CCDC188H7C350 AC018634.1-201ENST00000437554 401 ntBASIC2.34□□□□□ -2.03
CCDC188H7C350 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.34□□□□□ -2.03
CCDC188H7C350 AC090255.1-201ENST00000495779 349 ntBASIC2.34□□□□□ -2.03
CCDC188H7C350 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC188H7C350 AC234781.5-201ENST00000508429 271 ntBASIC2.34□□□□□ -2.03
CCDC188H7C350 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC188H7C350 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC188H7C350 RNU6-189P-201ENST00000516120 101 ntBASIC2.34□□□□□ -2.03
CCDC188H7C350 SNORA48.11-201ENST00000517015 89 ntBASIC2.34□□□□□ -2.03
CCDC188H7C350 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC188H7C350 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC188H7C350 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC188H7C350 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC188H7C350 VN1R80P-201ENST00000597126 338 ntBASIC2.34□□□□□ -2.03
CCDC188H7C350 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.34□□□□□ -2.03
CCDC188H7C350 HULC.1-201ENST00000612720 240 ntBASIC2.34□□□□□ -2.03
CCDC188H7C350 AC009831.4-201ENST00000620744 325 ntBASIC2.34□□□□□ -2.03
CCDC188H7C350 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC188H7C350 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC188H7C350 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.34□□□□□ -2.04
CCDC188H7C350 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CCDC188H7C350 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC188H7C350 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms