Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 AC124864.2-201ENST00000624736 186 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 AC092881.1-201ENST00000638218 2733 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 AC080128.1-201ENST00000474389 1917 ntBASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
NKX2-6A6NCS4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 RNU6-942P-201ENST00000363002 107 ntBASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 RNA5SP37-201ENST00000365420 130 ntBASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 RNU6-72P-201ENST00000384285 79 ntBASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 RNU6-1127P-201ENST00000384580 107 ntBASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 SNORA16.2-201ENST00000390991 127 ntBASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 SNORA26.9-201ENST00000391322 122 ntBASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 MTCO3P40-201ENST00000392516 676 ntBASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 AL356379.1-201ENST00000414105 126 ntBASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 AL353621.1-201ENST00000418219 243 ntBASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 AC007677.1-201ENST00000445757 515 ntBASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 MIR892C-201ENST00000516410 77 ntBASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 HIF1AP1-201ENST00000553642 175 ntBASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 OR11H5P-201ENST00000554039 926 ntBASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 MIR3199-1-201ENST00000582434 88 ntBASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 AC087045.1-201ENST00000605856 382 ntBASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 SNORD14A-201ENST00000606526 91 ntBASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 CENPCP1-201ENST00000533085 2578 ntBASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
NKX2-6A6NCS4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 SNORA3A-201ENST00000364113 130 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 RNU6-393P-201ENST00000384475 107 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 SNORD116-4-201ENST00000384733 96 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 SNORA46.1-201ENST00000391069 153 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 SNORA40.18-201ENST00000391200 128 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 AC019129.1-201ENST00000403786 261 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 RNU4-46P-201ENST00000410818 138 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 AL139156.1-201ENST00000412785 841 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 FABP5P14-201ENST00000437273 393 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 AC003071.1-201ENST00000451219 789 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 AL356010.1-201ENST00000456364 102 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 RNU6-717P-201ENST00000459076 104 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 AC112771.1-201ENST00000463581 102 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 SRRM1P2-201ENST00000464531 1192 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 AL163973.1-201ENST00000484753 577 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 AC009646.1-201ENST00000510455 318 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 AC074344.1-201ENST00000512823 224 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 AC105417.1-201ENST00000514691 285 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 SNORD19.2-201ENST00000516978 73 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 AK6P1-201ENST00000540219 478 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 AC023824.2-201ENST00000566185 400 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 MIR4448-201ENST00000584360 86 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 MIR4765-201ENST00000585007 77 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 BNIP3P30-201ENST00000601184 574 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 AC064807.4-201ENST00000607201 407 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 MTND4P1-201ENST00000457501 1466 ntBASIC1.81□□□□□ -2.12
NKX2-6A6NCS4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 Y_RNA.3-201ENST00000362331 103 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 RNU6-623P-201ENST00000363143 105 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 Y_RNA.164-201ENST00000363709 102 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 MIR17-201ENST00000385012 84 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 SNORA48.3-201ENST00000391081 134 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 RNU6-607P-201ENST00000411283 108 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 HMGB1P31-201ENST00000437242 427 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 AC016691.1-201ENST00000441321 413 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 PRPS1P1-201ENST00000445305 876 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 RPL23AP7-203ENST00000449021 469 ntBASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.8□□□□□ -2.12
NKX2-6A6NCS4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms