Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 RNU4-42P-201ENST00000364738 142 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 RNU4-9P-201ENST00000364951 139 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 RNU6-142P-201ENST00000384019 107 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 SNORA29-201ENST00000384183 140 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 SNORA36A-201ENST00000384221 132 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 MIR183-201ENST00000384958 110 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 SNORA12.2-201ENST00000391040 156 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 Y_RNA.605-201ENST00000410577 105 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 AC025518.1-201ENST00000479856 347 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 RPL23AP75-201ENST00000491601 451 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 AC093663.1-201ENST00000497190 394 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 AC016632.1-201ENST00000503994 196 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 RNU6-579P-201ENST00000516879 102 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 AC105137.2-201ENST00000569073 466 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 AC010928.2-201ENST00000588017 287 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 SNORD58B-201ENST00000607313 66 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 AL359198.2-201ENST00000611836 194 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 U7.8-201ENST00000619968 63 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 UCA1.1-201ENST00000620952 75 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 AL606534.2-204ENST00000635008 178 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 U6.105-201ENST00000637379 88 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 AC008669.1-201ENST00000565823 2178 ntBASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
IGHV4-28A0A0C4DH34 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 AC091812.1-201ENST00000432235 1948 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 Y_RNA.145-201ENST00000363527 102 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 RNA5SP72-201ENST00000364442 117 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 Y_RNA.527-201ENST00000384573 102 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 EI24P2-201ENST00000397776 1076 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 U3.39-201ENST00000408569 239 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 RN7SKP61-201ENST00000410642 295 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 AC002075.2-201ENST00000425207 252 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 AC006989.1-201ENST00000427212 131 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 AC017083.1-201ENST00000428093 483 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 AC009296.1-201ENST00000443146 155 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 OR2AQ1P-201ENST00000451972 200 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 TOMM22P6-201ENST00000465035 409 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 AF186996.7-201ENST00000492781 209 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 AC026784.1-201ENST00000507986 352 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 MRPS36P2-201ENST00000512569 299 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 RNU7-175P-201ENST00000515915 61 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 RN7SKP272-201ENST00000516988 232 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 GNAI2P1-201ENST00000541815 315 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 HSBP1P1-201ENST00000555205 166 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 RPL23AP88-201ENST00000605759 454 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 RNU6-91P-201ENST00000607774 107 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 AC096772.1-201ENST00000609146 564 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 AC087588.2-201ENST00000617667 426 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 AC007792.1-201ENST00000623023 402 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 SCARNA4-201ENST00000629045 128 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 MIR4272-201ENST00000635924 64 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 HSPA8P1-201ENST00000425843 1833 ntBASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
IGHV4-28A0A0C4DH34 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
IGHV4-28A0A0C4DH34 AC002543.1-201ENST00000299783 1954 ntBASIC2.52□□□□□ -2.01
IGHV4-28A0A0C4DH34 RNU4-35P-201ENST00000362588 141 ntBASIC2.52□□□□□ -2.01
IGHV4-28A0A0C4DH34 RNU6-1285P-201ENST00000363480 105 ntBASIC2.52□□□□□ -2.01
IGHV4-28A0A0C4DH34 MIR490-201ENST00000384865 128 ntBASIC2.52□□□□□ -2.01
IGHV4-28A0A0C4DH34 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.52□□□□□ -2.01
IGHV4-28A0A0C4DH34 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
IGHV4-28A0A0C4DH34 AC078809.1-201ENST00000427601 140 ntBASIC2.52□□□□□ -2.01
IGHV4-28A0A0C4DH34 RPL21P40-201ENST00000428586 483 ntBASIC2.52□□□□□ -2.01
IGHV4-28A0A0C4DH34 OSTCP8-201ENST00000445117 448 ntBASIC2.52□□□□□ -2.01
IGHV4-28A0A0C4DH34 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.52□□□□□ -2.01
IGHV4-28A0A0C4DH34 snoU13.30-201ENST00000458951 104 ntBASIC2.52□□□□□ -2.01
IGHV4-28A0A0C4DH34 RNU7-87P-201ENST00000459343 62 ntBASIC2.52□□□□□ -2.01
IGHV4-28A0A0C4DH34 RPL21P10-201ENST00000463521 490 ntBASIC2.52□□□□□ -2.01
IGHV4-28A0A0C4DH34 AC112771.1-201ENST00000463581 102 ntBASIC2.52□□□□□ -2.01
IGHV4-28A0A0C4DH34 AC087477.1-201ENST00000465747 340 ntBASIC2.52□□□□□ -2.01
IGHV4-28A0A0C4DH34 RN7SL594P-201ENST00000470590 287 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms