Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AL353752.1-201ENST00000454946 260 ntBASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 RNU6-333P-201ENST00000459117 107 ntBASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 RPS29P1-201ENST00000465274 159 ntBASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 RNU5A-4P-201ENST00000516588 111 ntBASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 RNU6-143P-201ENST00000516942 93 ntBASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 DEFB108E-201ENST00000524692 240 ntBASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 AC008751.2-201ENST00000597885 980 ntBASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 AC078795.2-201ENST00000602835 1252 ntBASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 AC040896.1-201ENST00000613819 479 ntBASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 AC068647.2-201ENST00000637380 353 ntBASIC0.46□□□□□ -2.34
HLA-DRB4X5D2U9 snoU2_19.1-201ENST00000362361 80 ntBASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 SNORD114-24-201ENST00000365029 72 ntBASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 U6.112-201ENST00000384129 70 ntBASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 MIR499A-201ENST00000384903 122 ntBASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 RNU2-23P-201ENST00000410545 195 ntBASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 snoU13.14-201ENST00000459372 104 ntBASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 RAP1BP2-201ENST00000478270 544 ntBASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 TRBVA-201ENST00000498804 316 ntBASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 RNA5SP481-201ENST00000516814 122 ntBASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 SNORA70.22-201ENST00000517160 124 ntBASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 SLC2A13P1-201ENST00000531560 322 ntBASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 AC004812.1-201ENST00000540773 146 ntBASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 SNRPGP1-201ENST00000553864 222 ntBASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 AC022022.2-201ENST00000602989 360 ntBASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 MIR6788-201ENST00000618842 66 ntBASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 uc_338.17-201ENST00000619633 179 ntBASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 AL157770.1-201ENST00000623049 439 ntBASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 MTND4P16-201ENST00000466108 1367 ntBASIC0.45□□□□□ -2.34
HLA-DRB4X5D2U9 CDR1-202ENST00000625883 1485 ntBASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 RNU6-622P-201ENST00000384272 103 ntBASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 SNORA40C-201ENST00000391285 128 ntBASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 AL117342.1-201ENST00000404861 406 ntBASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 AL357139.1-201ENST00000407792 426 ntBASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 AC114482.1-201ENST00000418010 247 ntBASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 RPS15AP10-201ENST00000432472 382 ntBASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 ELOCP30-201ENST00000447108 299 ntBASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 RPF2P2-201ENST00000504693 896 ntBASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 HIGD1AP17-201ENST00000554576 276 ntBASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 MIR151B-201ENST00000584249 96 ntBASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 AL590229.1-201ENST00000603497 542 ntBASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 AC016727.2-201ENST00000603988 621 ntBASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 KATNBL1P5-201ENST00000605015 517 ntBASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 AP000654.2-201ENST00000605633 586 ntBASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.44□□□□□ -2.34
HLA-DRB4X5D2U9 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 RNU6-212P-201ENST00000362642 104 ntBASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 RNU6-166P-201ENST00000384371 107 ntBASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 MIR194-1-201ENST00000384892 85 ntBASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 RPS26P5-201ENST00000418544 335 ntBASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 RPS27P22-201ENST00000478056 241 ntBASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 RNU6-551P-201ENST00000516661 103 ntBASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 AC090142.3-201ENST00000519012 385 ntBASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 AP003484.1-201ENST00000530974 250 ntBASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 AL133153.1-201ENST00000557756 303 ntBASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 CYP4A27P-201ENST00000567218 190 ntBASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 MIR4714-201ENST00000580728 77 ntBASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 BNIP3P9-201ENST00000603714 553 ntBASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 AC107304.1-201ENST00000604229 296 ntBASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 AC069114.2-201ENST00000604699 304 ntBASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 AC130324.3-201ENST00000614165 542 ntBASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 AC063943.3-201ENST00000615562 356 ntBASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
HLA-DRB4X5D2U9 RNU6-1122P-201ENST00000384449 107 ntBASIC0.42□□□□□ -2.34
HLA-DRB4X5D2U9 SNORD65.1-201ENST00000390889 71 ntBASIC0.42□□□□□ -2.34
HLA-DRB4X5D2U9 AL356776.1-201ENST00000406574 447 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms